RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 TMEM14BQ9NUH8 114 aa10.43□□□□□ -0.74
VAPB-203ENST00000463370 H0YJW9 148 aa10.43□□□□□ -0.74
VAPB-203ENST00000463370 IGKV1D-33P01593 117 aa10.43□□□□□ -0.74
VAPB-203ENST00000463370 IGKV1-33P01594 117 aa10.43□□□□□ -0.74
VAPB-203ENST00000463370 ELLP55199 621 aaPredicted RBP10.43□□□□□ -0.74
VAPB-203ENST00000463370 C4orf17Q53FE4 359 aa10.43□□□□□ -0.74
VAPB-203ENST00000463370 PDLIM3Q53GG5 364 aaPredicted RBP10.43□□□□□ -0.74
VAPB-203ENST00000463370 OR52E5Q8NH55 327 aa10.43□□□□□ -0.74
VAPB-203ENST00000463370 HEYLQ9NQ87 328 aaPredicted RBP10.43□□□□□ -0.74
VAPB-203ENST00000463370 DNASE2O00115 360 aaPredicted RBP10.42□□□□□ -0.74
VAPB-203ENST00000463370 IL6RP08887 468 aaPredicted RBP10.42□□□□□ -0.74
VAPB-203ENST00000463370 NPBWR1P48145 328 aa10.42□□□□□ -0.74
VAPB-203ENST00000463370 ST6GALNAC6Q969X2 333 aa10.42□□□□□ -0.74
VAPB-203ENST00000463370 TMEM147Q9BVK8 224 aa10.42□□□□□ -0.74
VAPB-203ENST00000463370 FOXA2Q9Y261 457 aaPredicted RBP10.42□□□□□ -0.74
VAPB-203ENST00000463370 CSMD1Q96PZ7 3565 aa10.42□□□□□ -0.74
VAPB-203ENST00000463370 IFNA10P01566 189 aa10.41□□□□□ -0.74
VAPB-203ENST00000463370 OR8U8P0C7N1 319 aa10.41□□□□□ -0.74
VAPB-203ENST00000463370 GNB2P62879 340 aa10.41□□□□□ -0.74
VAPB-203ENST00000463370 POU2AF1Q16633 256 aa10.41□□□□□ -0.74
VAPB-203ENST00000463370 RTL8BQ17RB0 113 aa10.41□□□□□ -0.74
VAPB-203ENST00000463370 ACSM6Q6P461 480 aa10.41□□□□□ -0.74
VAPB-203ENST00000463370 SVBPQ8N300 66 aa10.41□□□□□ -0.74
VAPB-203ENST00000463370 COMMD1Q8N668 190 aa10.41□□□□□ -0.74
VAPB-203ENST00000463370 OR5AN1Q8NGI8 311 aa10.41□□□□□ -0.74
VAPB-203ENST00000463370 ZNF596Q8TC21 504 aa10.41□□□□□ -0.74
VAPB-203ENST00000463370 PSMG3Q9BT73 122 aaPredicted RBP10.41□□□□□ -0.74
VAPB-203ENST00000463370 PARD6GQ9BYG4 376 aaPredicted RBP10.41□□□□□ -0.74
VAPB-203ENST00000463370 RAB1BQ9H0U4 201 aa10.41□□□□□ -0.74
VAPB-203ENST00000463370 MALRD1Q5VYJ5 2156 aa10.41□□□□□ -0.74
VAPB-203ENST00000463370 HCFC1P51610 2035 aa10.41□□□□□ -0.74
VAPB-203ENST00000463370 A0A087X0M5 115 aa10.41□□□□□ -0.74
VAPB-203ENST00000463370 A0A1B0GX30 115 aa10.41□□□□□ -0.74
VAPB-203ENST00000463370 H7C2Y5 167 aa10.41□□□□□ -0.74
VAPB-203ENST00000463370 NDUFS7O75251 213 aa10.41□□□□□ -0.74
VAPB-203ENST00000463370 HRASP01112 189 aa10.41□□□□□ -0.74
VAPB-203ENST00000463370 SAA1P0DJI8 122 aaPredicted RBP10.41□□□□□ -0.74
VAPB-203ENST00000463370 HOXA1P49639 335 aaPredicted RBP10.41□□□□□ -0.74
VAPB-203ENST00000463370 RAB2AP61019 212 aa10.41□□□□□ -0.74
VAPB-203ENST00000463370 VWC2Q2TAL6 325 aa10.41□□□□□ -0.74
VAPB-203ENST00000463370 PINX1Q96BK5 328 aaKnown RBP10.41□□□□□ -0.74
VAPB-203ENST00000463370 NABP2Q9BQ15 211 aa10.41□□□□□ -0.74
VAPB-203ENST00000463370 AIFM2Q9BRQ8 373 aa10.41□□□□□ -0.74
VAPB-203ENST00000463370 TMEM133Q9H2Q1 129 aa10.41□□□□□ -0.74
VAPB-203ENST00000463370 TRBV23-1A0A0A0MS06 115 aa10.4□□□□□ -0.74
VAPB-203ENST00000463370 PRSS46E5RG02 174 aa10.4□□□□□ -0.74
VAPB-203ENST00000463370 MDKP21741 143 aaPredicted RBP10.4□□□□□ -0.74
VAPB-203ENST00000463370 FGF7P21781 194 aa10.4□□□□□ -0.74
VAPB-203ENST00000463370 HSPE1P61604 102 aaKnown RBP10.4□□□□□ -0.74
VAPB-203ENST00000463370 HAGHQ16775 308 aa10.4□□□□□ -0.74
VAPB-203ENST00000463370 TMEM88Q6PEY1 159 aa10.4□□□□□ -0.74
VAPB-203ENST00000463370 LCN15Q6UWW0 184 aa10.4□□□□□ -0.74
VAPB-203ENST00000463370 LINC00311Q8N616 119 aa10.4□□□□□ -0.74
VAPB-203ENST00000463370 RCC1LQ96I51 464 aaKnown RBP10.4□□□□□ -0.74
VAPB-203ENST00000463370 RITA1Q96K30 269 aa10.4□□□□□ -0.74
VAPB-203ENST00000463370 HINT2Q9BX68 163 aa10.4□□□□□ -0.74
VAPB-203ENST00000463370 OR51B2Q9Y5P1 312 aa10.4□□□□□ -0.74
VAPB-203ENST00000463370 FLNCQ14315 2725 aa10.4□□□□□ -0.74
VAPB-203ENST00000463370 C22orf46C9J442 243 aa10.4□□□□□ -0.74
VAPB-203ENST00000463370 UPK2O00526 184 aa10.4□□□□□ -0.74
VAPB-203ENST00000463370 DEFA4P12838 97 aa10.4□□□□□ -0.74
VAPB-203ENST00000463370 CDKN1AP38936 164 aa10.4□□□□□ -0.74
VAPB-203ENST00000463370 FGF8P55075 233 aaPredicted RBP10.4□□□□□ -0.74
VAPB-203ENST00000463370 TLE4Q04727 773 aa10.4□□□□□ -0.74
VAPB-203ENST00000463370 ATP6V1FQ16864 119 aa10.4□□□□□ -0.74
VAPB-203ENST00000463370 WDR25Q64LD2 544 aaPredicted RBP10.4□□□□□ -0.74
VAPB-203ENST00000463370 RPP25LQ8N5L8 163 aaKnown RBP10.4□□□□□ -0.74
VAPB-203ENST00000463370 Q8N7P7 452 aa10.4□□□□□ -0.74
VAPB-203ENST00000463370 OR9G1Q8NH87 305 aa10.4□□□□□ -0.74
VAPB-203ENST00000463370 HARBI1Q96MB7 349 aa10.4□□□□□ -0.74
VAPB-203ENST00000463370 NPCDR1Q9BY65 106 aa10.4□□□□□ -0.74
VAPB-203ENST00000463370 HIPK2Q9H2X6 1198 aa10.4□□□□□ -0.74
VAPB-203ENST00000463370 IGHV3-72A0A0B4J1Y9 119 aa10.39□□□□□ -0.75
VAPB-203ENST00000463370 FSTL3O95633 263 aa10.39□□□□□ -0.75
VAPB-203ENST00000463370 PEA15Q15121 130 aa10.39□□□□□ -0.75
VAPB-203ENST00000463370 ETV3LQ6ZN32 361 aa10.39□□□□□ -0.75
VAPB-203ENST00000463370 DTX2Q86UW9 622 aa10.39□□□□□ -0.75
VAPB-203ENST00000463370 C8orf31Q8N9H6 132 aa10.39□□□□□ -0.75
VAPB-203ENST00000463370 TET2Q6N021 2002 aaPredicted RBP10.39□□□□□ -0.75
VAPB-203ENST00000463370 IGHV2-26A0A0B4J1V2 119 aa10.39□□□□□ -0.75
VAPB-203ENST00000463370 PPIAL4CA0A0B4J2A2 164 aa10.39□□□□□ -0.75
VAPB-203ENST00000463370 RBFOX3A6NFN3 312 aa10.39□□□□□ -0.75
VAPB-203ENST00000463370 TSPAN4O14817 238 aa10.39□□□□□ -0.75
VAPB-203ENST00000463370 FBP1P09467 338 aa10.39□□□□□ -0.75
VAPB-203ENST00000463370 PPIAL4GP0DN37 164 aa10.39□□□□□ -0.75
VAPB-203ENST00000463370 OR13C7P0DN81 318 aa10.39□□□□□ -0.75
VAPB-203ENST00000463370 SERF2P84101 59 aa10.39□□□□□ -0.75
VAPB-203ENST00000463370 TMEM41BQ5BJD5 291 aa10.39□□□□□ -0.75
VAPB-203ENST00000463370 DHRS7BQ6IAN0 325 aaPredicted RBP10.39□□□□□ -0.75
VAPB-203ENST00000463370 DPPA3Q6W0C5 159 aa10.39□□□□□ -0.75
VAPB-203ENST00000463370 CENPVQ7Z7K6 275 aaPredicted RBP10.39□□□□□ -0.75
VAPB-203ENST00000463370 CBLN2Q8IUK8 224 aa10.39□□□□□ -0.75
VAPB-203ENST00000463370 LFNGQ8NES3 379 aa10.39□□□□□ -0.75
VAPB-203ENST00000463370 RAB39BQ96DA2 213 aa10.39□□□□□ -0.75
VAPB-203ENST00000463370 USP24Q9UPU5 2620 aa10.39□□□□□ -0.75
VAPB-203ENST00000463370 TEX50A0A1B0GTY4 177 aa10.38□□□□□ -0.75
VAPB-203ENST00000463370 E7EUB6 86 aa10.38□□□□□ -0.75
VAPB-203ENST00000463370 HMGB3O15347 200 aaKnown RBP10.38□□□□□ -0.75
VAPB-203ENST00000463370 APOA2P02652 100 aa10.38□□□□□ -0.75
VAPB-203ENST00000463370 CD1BP29016 333 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms