RNA–Protein interactions for RNA: ENST00000462254.1

CSMD3-205, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 2

Gene CSMD3, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-205ENST00000462254 ORC5O43913 435 aa3.73□□□□□ -1.81
CSMD3-205ENST00000462254 CA11O75493 328 aa3.73□□□□□ -1.81
CSMD3-205ENST00000462254 ATP5LO75964 103 aa3.73□□□□□ -1.81
CSMD3-205ENST00000462254 NAPSAO96009 420 aa3.73□□□□□ -1.81
CSMD3-205ENST00000462254 GLAP06280 429 aa3.73□□□□□ -1.81
CSMD3-205ENST00000462254 FCGR3AP08637 254 aa3.73□□□□□ -1.81
CSMD3-205ENST00000462254 PRSS3P35030 304 aa3.73□□□□□ -1.81
CSMD3-205ENST00000462254 SAA4P35542 130 aa3.73□□□□□ -1.81
CSMD3-205ENST00000462254 GABRA2P47869 451 aa3.73□□□□□ -1.81
CSMD3-205ENST00000462254 EFNA4P52798 201 aa3.73□□□□□ -1.81
CSMD3-205ENST00000462254 GNG2P59768 71 aa3.73□□□□□ -1.81
CSMD3-205ENST00000462254 MRPS10P82664 201 aaKnown RBP3.73□□□□□ -1.81
CSMD3-205ENST00000462254 MRPS11P82912 194 aaKnown RBP3.73□□□□□ -1.81
CSMD3-205ENST00000462254 MRPS15P82914 257 aaKnown RBP3.73□□□□□ -1.81
CSMD3-205ENST00000462254 ARFRP1Q13795 201 aa3.73□□□□□ -1.81
CSMD3-205ENST00000462254 PAN3Q58A45 887 aaKnown RBP3.73□□□□□ -1.81
CSMD3-205ENST00000462254 C6orf183Q5T699 404 aa3.73□□□□□ -1.81
CSMD3-205ENST00000462254 RSBN1Q5VWQ0 802 aaPredicted RBP3.73□□□□□ -1.81
CSMD3-205ENST00000462254 FAAP20Q6NZ36 180 aa3.73□□□□□ -1.81
CSMD3-205ENST00000462254 ZNF497Q6ZNH5 498 aa3.73□□□□□ -1.81
CSMD3-205ENST00000462254 C19orf35Q6ZS72 473 aa3.73□□□□□ -1.81
CSMD3-205ENST00000462254 TRAPPC6BQ86SZ2 158 aa3.73□□□□□ -1.81
CSMD3-205ENST00000462254 GAPTQ8N292 157 aa3.73□□□□□ -1.81
CSMD3-205ENST00000462254 ZNF561Q8N587 486 aa3.73□□□□□ -1.81
CSMD3-205ENST00000462254 TPRX1Q8N7U7 411 aa3.73□□□□□ -1.81
CSMD3-205ENST00000462254 OR4K15Q8NH41 348 aa3.73□□□□□ -1.81
CSMD3-205ENST00000462254 MRPL30Q8TCC3 161 aaKnown RBP3.73□□□□□ -1.81
CSMD3-205ENST00000462254 TNFRSF14Q92956 283 aa3.73□□□□□ -1.81
CSMD3-205ENST00000462254 CLCC1Q96S66 551 aa3.73□□□□□ -1.81
CSMD3-205ENST00000462254 CMSS1Q9BQ75 279 aaKnown RBP3.73□□□□□ -1.81
CSMD3-205ENST00000462254 MCRIP2Q9BUT9 160 aaKnown RBP3.73□□□□□ -1.81
CSMD3-205ENST00000462254 HINT2Q9BX68 163 aa3.73□□□□□ -1.81
CSMD3-205ENST00000462254 TMEM165Q9HC07 324 aa3.73□□□□□ -1.81
CSMD3-205ENST00000462254 KAAG1Q9UBP8 84 aa3.73□□□□□ -1.81
CSMD3-205ENST00000462254 ZNF230Q9UIE0 474 aaPredicted RBP3.73□□□□□ -1.81
CSMD3-205ENST00000462254 APCP25054 2843 aa3.73□□□□□ -1.81
CSMD3-205ENST00000462254 TET2Q6N021 2002 aaPredicted RBP3.73□□□□□ -1.81
CSMD3-205ENST00000462254 TACC2O95359 2948 aa3.73□□□□□ -1.81
CSMD3-205ENST00000462254 ASH1LQ9NR48 2969 aaKnown RBP3.72□□□□□ -1.81
CSMD3-205ENST00000462254 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.72□□□□□ -1.81
CSMD3-205ENST00000462254 PDZD2O15018 2839 aa3.72□□□□□ -1.81
CSMD3-205ENST00000462254 SPG11Q96JI7 2443 aa3.72□□□□□ -1.81
CSMD3-205ENST00000462254 CSMD2Q7Z408 3487 aa3.72□□□□□ -1.81
CSMD3-205ENST00000462254 TRBV6-6A0A0A6YYG2 114 aa3.72□□□□□ -1.81
CSMD3-205ENST00000462254 TRBV9A0A0B4J1U6 114 aa3.72□□□□□ -1.81
CSMD3-205ENST00000462254 ISPDA4D126 451 aa3.72□□□□□ -1.81
CSMD3-205ENST00000462254 RAB19A4D1S5 217 aa3.72□□□□□ -1.81
CSMD3-205ENST00000462254 CEACAM18A8MTB9 384 aa3.72□□□□□ -1.81
CSMD3-205ENST00000462254 K7N7A8 449 aa3.72□□□□□ -1.81
CSMD3-205ENST00000462254 RAB29O14966 203 aa3.72□□□□□ -1.81
CSMD3-205ENST00000462254 RBBP9O75884 186 aa3.72□□□□□ -1.81
CSMD3-205ENST00000462254 FSTL3O95633 263 aa3.72□□□□□ -1.81
CSMD3-205ENST00000462254 CD3DP04234 171 aa3.72□□□□□ -1.81
CSMD3-205ENST00000462254 CSN2P05814 226 aa3.72□□□□□ -1.81
CSMD3-205ENST00000462254 FRMD6-AS1P0C7T7 363 aa3.72□□□□□ -1.81
CSMD3-205ENST00000462254 PAX1P15863 534 aa3.72□□□□□ -1.81
CSMD3-205ENST00000462254 NQO2P16083 231 aa3.72□□□□□ -1.81
CSMD3-205ENST00000462254 RCC1P18754 421 aaPredicted RBP3.72□□□□□ -1.81
CSMD3-205ENST00000462254 DTYMKP23919 212 aa3.72□□□□□ -1.81
CSMD3-205ENST00000462254 BTCP35070 178 aa3.72□□□□□ -1.81
CSMD3-205ENST00000462254 RCVRNP35243 200 aa3.72□□□□□ -1.81
CSMD3-205ENST00000462254 MDH2P40926 338 aaKnown RBP3.72□□□□□ -1.81
CSMD3-205ENST00000462254 GPR6P46095 362 aaPredicted RBP3.72□□□□□ -1.81
CSMD3-205ENST00000462254 ATP5J2P56134 94 aa3.72□□□□□ -1.81
CSMD3-205ENST00000462254 ACTBP60709 375 aa3.72□□□□□ -1.81
CSMD3-205ENST00000462254 ACTG1P63261 375 aa3.72□□□□□ -1.81
CSMD3-205ENST00000462254 SSBP1Q04837 148 aaKnown RBP3.72□□□□□ -1.81
CSMD3-205ENST00000462254 AESQ08117 197 aa3.72□□□□□ -1.81
CSMD3-205ENST00000462254 EDDM3AQ14507 147 aa3.72□□□□□ -1.81
CSMD3-205ENST00000462254 HERPUD1Q15011 391 aa3.72□□□□□ -1.81
CSMD3-205ENST00000462254 ARL6IP1Q15041 203 aa3.72□□□□□ -1.81
CSMD3-205ENST00000462254 GRK1Q15835 563 aa3.72□□□□□ -1.81
CSMD3-205ENST00000462254 LY6G6FQ5SQ64 297 aa3.72□□□□□ -1.81
CSMD3-205ENST00000462254 TRIQKQ629K1 86 aa3.72□□□□□ -1.81
CSMD3-205ENST00000462254 ZNF57Q68EA5 555 aaPredicted RBP3.72□□□□□ -1.81
CSMD3-205ENST00000462254 SLC35E4Q6ICL7 350 aa3.72□□□□□ -1.81
CSMD3-205ENST00000462254 ZNF880Q6PDB4 577 aa3.72□□□□□ -1.81
CSMD3-205ENST00000462254 TCF23Q7RTU1 214 aa3.72□□□□□ -1.81
CSMD3-205ENST00000462254 HOGA1Q86XE5 327 aa3.72□□□□□ -1.81
CSMD3-205ENST00000462254 APRG1Q8IVJ8 170 aa3.72□□□□□ -1.81
CSMD3-205ENST00000462254 LINC01561Q8N1V8 128 aa3.72□□□□□ -1.81
CSMD3-205ENST00000462254 TOMM5Q8N4H5 51 aa3.72□□□□□ -1.81
CSMD3-205ENST00000462254 TMEM229BQ8NBD8 167 aa3.72□□□□□ -1.81
CSMD3-205ENST00000462254 BEST4Q8NFU0 473 aa3.72□□□□□ -1.81
CSMD3-205ENST00000462254 OR4C16Q8NGL9 310 aa3.72□□□□□ -1.81
CSMD3-205ENST00000462254 OR13A1Q8NGR1 328 aa3.72□□□□□ -1.81
CSMD3-205ENST00000462254 C15orf40Q8WUR7 153 aa3.72□□□□□ -1.81
CSMD3-205ENST00000462254 PPP1R14BQ96C90 147 aa3.72□□□□□ -1.81
CSMD3-205ENST00000462254 OVOL2Q9BRP0 275 aa3.72□□□□□ -1.81
CSMD3-205ENST00000462254 KRTAP17-1Q9BYP8 105 aa3.72□□□□□ -1.81
CSMD3-205ENST00000462254 BPESC1Q9GZL8 116 aa3.72□□□□□ -1.81
CSMD3-205ENST00000462254 PATZ1Q9HBE1 687 aaKnown RBP3.72□□□□□ -1.81
CSMD3-205ENST00000462254 MYOZ1Q9NP98 299 aaPredicted RBP3.72□□□□□ -1.81
CSMD3-205ENST00000462254 C12orf4Q9NQ89 552 aa3.72□□□□□ -1.81
CSMD3-205ENST00000462254 IFT46Q9NQC8 304 aa3.72□□□□□ -1.81
CSMD3-205ENST00000462254 GLS2Q9UI32 602 aa3.72□□□□□ -1.81
CSMD3-205ENST00000462254 KIF25Q9UIL4 384 aa3.72□□□□□ -1.81
CSMD3-205ENST00000462254 TCF19Q9Y242 345 aa3.72□□□□□ -1.81
CSMD3-205ENST00000462254 CBY1Q9Y3M2 126 aa3.72□□□□□ -1.81
CSMD3-205ENST00000462254 KPTNQ9Y664 436 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms