RNA–Protein interactions for RNA: ENST00000460960.1

NCK1-202, Transcript of NCK adaptor protein 1, humanhuman

TSL 2

Gene NCK1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-202ENST00000460960 KIAA1456Q9P272 454 aa11.45□□□□□ -0.58
NCK1-202ENST00000460960 VSIG4Q9Y279 399 aa11.45□□□□□ -0.58
NCK1-202ENST00000460960 PRELID3BQ9Y3B1 194 aa11.45□□□□□ -0.58
NCK1-202ENST00000460960 LSM4Q9Y4Z0 139 aaKnown RBP11.45□□□□□ -0.58
NCK1-202ENST00000460960 CCL24O00175 119 aa11.44□□□□□ -0.58
NCK1-202ENST00000460960 ARPC1BO15143 372 aaKnown RBP11.44□□□□□ -0.58
NCK1-202ENST00000460960 LY86O95711 162 aa11.44□□□□□ -0.58
NCK1-202ENST00000460960 CA2P00918 260 aa11.44□□□□□ -0.58
NCK1-202ENST00000460960 HLA-DRB1P01911 266 aa11.44□□□□□ -0.58
NCK1-202ENST00000460960 SAA1P0DJI8 122 aaPredicted RBP11.44□□□□□ -0.58
NCK1-202ENST00000460960 RRASP10301 218 aa11.44□□□□□ -0.58
NCK1-202ENST00000460960 RPA2P15927 270 aa11.44□□□□□ -0.58
NCK1-202ENST00000460960 SLC6A1P30531 599 aa11.44□□□□□ -0.58
NCK1-202ENST00000460960 PLGLAQ15195 96 aa11.44□□□□□ -0.58
NCK1-202ENST00000460960 DEFB136Q30KP8 78 aa11.44□□□□□ -0.58
NCK1-202ENST00000460960 LIN54Q6MZP7 749 aa11.44□□□□□ -0.58
NCK1-202ENST00000460960 OR4S2Q8NH73 311 aa11.44□□□□□ -0.58
NCK1-202ENST00000460960 RAX2Q96IS3 184 aa11.44□□□□□ -0.58
NCK1-202ENST00000460960 C5orf66Q9H5L9 145 aa11.44□□□□□ -0.58
NCK1-202ENST00000460960 PALMDQ9NP74 551 aa11.44□□□□□ -0.58
NCK1-202ENST00000460960 SLC2A8Q9NY64 477 aa11.44□□□□□ -0.58
NCK1-202ENST00000460960 TENM2Q9NT68 2774 aa11.44□□□□□ -0.58
NCK1-202ENST00000460960 SEC14L6B5MCN3 397 aa11.43□□□□□ -0.58
NCK1-202ENST00000460960 ATP6V0E1O15342 81 aa11.43□□□□□ -0.58
NCK1-202ENST00000460960 SPDEFO95238 335 aa11.43□□□□□ -0.58
NCK1-202ENST00000460960 IGKV1-39P01597 117 aa11.43□□□□□ -0.58
NCK1-202ENST00000460960 IGKV1D-39P04432 117 aa11.43□□□□□ -0.58
NCK1-202ENST00000460960 EGR2P11161 476 aaPredicted RBP11.43□□□□□ -0.58
NCK1-202ENST00000460960 MYOD1P15172 320 aa11.43□□□□□ -0.58
NCK1-202ENST00000460960 BTCP35070 178 aa11.43□□□□□ -0.58
NCK1-202ENST00000460960 LGALS7P47929 136 aa11.43□□□□□ -0.58
NCK1-202ENST00000460960 PIGPP57054 158 aa11.43□□□□□ -0.58
NCK1-202ENST00000460960 CX3CL1P78423 397 aa11.43□□□□□ -0.58
NCK1-202ENST00000460960 C9orf66Q5T8R8 295 aa11.43□□□□□ -0.58
NCK1-202ENST00000460960 TRIQKQ629K1 86 aa11.43□□□□□ -0.58
NCK1-202ENST00000460960 SSX9Q7RTT3 188 aa11.43□□□□□ -0.58
NCK1-202ENST00000460960 CMTM1Q8IZ96 169 aa11.43□□□□□ -0.58
NCK1-202ENST00000460960 ADAD2Q8NCV1 583 aaKnown RBP11.43□□□□□ -0.58
NCK1-202ENST00000460960 OR5M8Q8NGP6 311 aa11.43□□□□□ -0.58
NCK1-202ENST00000460960 OSR1Q8TAX0 266 aaPredicted RBP11.43□□□□□ -0.58
NCK1-202ENST00000460960 TP53RKQ96S44 253 aa11.43□□□□□ -0.58
NCK1-202ENST00000460960 FAM103A1Q9BTL3 118 aaKnown RBP11.43□□□□□ -0.58
NCK1-202ENST00000460960 PARP11Q9NR21 331 aa11.43□□□□□ -0.58
NCK1-202ENST00000460960 WSB1Q9Y6I7 421 aa11.43□□□□□ -0.58
NCK1-202ENST00000460960 STAB2Q8WWQ8 2551 aa11.43□□□□□ -0.58
NCK1-202ENST00000460960 TRAV3A0A0B4J244 114 aa11.42□□□□□ -0.58
NCK1-202ENST00000460960 G3V318 75 aa11.42□□□□□ -0.58
NCK1-202ENST00000460960 MPPED1O15442 326 aa11.42□□□□□ -0.58
NCK1-202ENST00000460960 PLA2G10O15496 165 aa11.42□□□□□ -0.58
NCK1-202ENST00000460960 CTSDP07339 412 aaPredicted RBP11.42□□□□□ -0.58
NCK1-202ENST00000460960 F2RP25116 425 aa11.42□□□□□ -0.58
NCK1-202ENST00000460960 LPAR6P43657 344 aa11.42□□□□□ -0.58
NCK1-202ENST00000460960 CCR6P51684 374 aa11.42□□□□□ -0.58
NCK1-202ENST00000460960 UBE2KP61086 200 aa11.42□□□□□ -0.58
NCK1-202ENST00000460960 RND3P61587 244 aa11.42□□□□□ -0.58
NCK1-202ENST00000460960 CATR1Q13166 79 aa11.42□□□□□ -0.58
NCK1-202ENST00000460960 CBX3Q13185 183 aa11.42□□□□□ -0.58
NCK1-202ENST00000460960 SP6Q3SY56 376 aa11.42□□□□□ -0.58
NCK1-202ENST00000460960 C10orf55Q5SWW7 151 aa11.42□□□□□ -0.58
NCK1-202ENST00000460960 LPCAT3Q6P1A2 487 aa11.42□□□□□ -0.58
NCK1-202ENST00000460960 LINC00299Q6ZSB3 139 aa11.42□□□□□ -0.58
NCK1-202ENST00000460960 LCNL1Q6ZST4 164 aa11.42□□□□□ -0.58
NCK1-202ENST00000460960 FOXRED2Q8IWF2 684 aa11.42□□□□□ -0.58
NCK1-202ENST00000460960 STPG2Q8N412 459 aa11.42□□□□□ -0.58
NCK1-202ENST00000460960 COMMD1Q8N668 190 aa11.42□□□□□ -0.58
NCK1-202ENST00000460960 TMEM230Q96A57 120 aa11.42□□□□□ -0.58
NCK1-202ENST00000460960 PRRT1Q99946 306 aa11.42□□□□□ -0.58
NCK1-202ENST00000460960 OR51J1Q9H342 316 aa11.42□□□□□ -0.58
NCK1-202ENST00000460960 GPR132Q9UNW8 380 aa11.42□□□□□ -0.58
NCK1-202ENST00000460960 RBFOX2O43251 390 aaKnown RBP eCLIP11.41□□□□□ -0.58
NCK1-202ENST00000460960 RPLP1P05386 114 aaKnown RBP11.41□□□□□ -0.58
NCK1-202ENST00000460960 CD40LGP29965 261 aa11.41□□□□□ -0.58
NCK1-202ENST00000460960 KIR2DS2P43631 304 aa11.41□□□□□ -0.58
NCK1-202ENST00000460960 AP3S2P59780 193 aa11.41□□□□□ -0.58
NCK1-202ENST00000460960 GNB1P62873 340 aa11.41□□□□□ -0.58
NCK1-202ENST00000460960 PPP1R27Q86WC6 154 aa11.41□□□□□ -0.58
NCK1-202ENST00000460960 PUSL1Q8N0Z8 303 aaKnown RBP11.41□□□□□ -0.58
NCK1-202ENST00000460960 BORCS5Q969J3 196 aa11.41□□□□□ -0.58
NCK1-202ENST00000460960 RHOVQ96L33 236 aa11.41□□□□□ -0.58
NCK1-202ENST00000460960 RCHY1Q96PM5 261 aa11.41□□□□□ -0.58
NCK1-202ENST00000460960 ZNF430Q9H8G1 570 aaPredicted RBP11.41□□□□□ -0.58
NCK1-202ENST00000460960 PRR13Q9NZ81 148 aa11.41□□□□□ -0.58
NCK1-202ENST00000460960 A0A1B0GW64 132 aa11.4□□□□□ -0.58
NCK1-202ENST00000460960 LYL1P12980 280 aa11.4□□□□□ -0.58
NCK1-202ENST00000460960 G6PCP35575 357 aa11.4□□□□□ -0.58
NCK1-202ENST00000460960 IFITM3Q01628 133 aa11.4□□□□□ -0.58
NCK1-202ENST00000460960 CFHR3Q02985 330 aa11.4□□□□□ -0.58
NCK1-202ENST00000460960 PRSS8Q16651 343 aa11.4□□□□□ -0.58
NCK1-202ENST00000460960 VMA21Q3ZAQ7 101 aa11.4□□□□□ -0.58
NCK1-202ENST00000460960 C19orf54Q5BKX5 351 aa11.4□□□□□ -0.58
NCK1-202ENST00000460960 CXorf66Q5JRM2 361 aaPredicted RBP11.4□□□□□ -0.58
NCK1-202ENST00000460960 OR4A47Q6IF82 309 aa11.4□□□□□ -0.58
NCK1-202ENST00000460960 TEX38Q6PEX7 206 aa11.4□□□□□ -0.58
NCK1-202ENST00000460960 TEX45Q8NA69 505 aa11.4□□□□□ -0.58
NCK1-202ENST00000460960 GRPEL2Q8TAA5 225 aa11.4□□□□□ -0.58
NCK1-202ENST00000460960 ZFAND1Q8TCF1 268 aa11.4□□□□□ -0.58
NCK1-202ENST00000460960 ZNF486Q96H40 463 aaPredicted RBP11.4□□□□□ -0.58
NCK1-202ENST00000460960 SCP2D1Q9UJQ7 156 aa11.4□□□□□ -0.58
NCK1-202ENST00000460960 ZNF256Q9Y2P7 627 aaPredicted RBP11.4□□□□□ -0.58
NCK1-202ENST00000460960 DYNC2H1Q8NCM8 4307 aaKnown RBP11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms