RNA–Protein interactions for RNA: ENST00000460235.1

HDAC4-206, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 343 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-206ENST00000460235 TMEM219Q86XT9 240 aa9.85□□□□□ -0.83
HDAC4-206ENST00000460235 FOXRED2Q8IWF2 684 aa9.85□□□□□ -0.83
HDAC4-206ENST00000460235 SELENOHQ8IZQ5 122 aaKnown RBP9.85□□□□□ -0.83
HDAC4-206ENST00000460235 C5orf56Q8N8D9 126 aa9.85□□□□□ -0.83
HDAC4-206ENST00000460235 TMEM68Q96MH6 324 aa9.85□□□□□ -0.83
HDAC4-206ENST00000460235 CLCC1Q96S66 551 aa9.85□□□□□ -0.83
HDAC4-206ENST00000460235 BEX1Q9HBH7 125 aa9.85□□□□□ -0.83
HDAC4-206ENST00000460235 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.85□□□□□ -0.83
HDAC4-206ENST00000460235 TMEM140Q9NV12 185 aa9.85□□□□□ -0.83
HDAC4-206ENST00000460235 A0A1B0GUS0 222 aa9.84□□□□□ -0.83
HDAC4-206ENST00000460235 CYB5BO43169 146 aa9.84□□□□□ -0.83
HDAC4-206ENST00000460235 SULT1A3P0DMM9 295 aa9.84□□□□□ -0.83
HDAC4-206ENST00000460235 SULT1A4P0DMN0 295 aa9.84□□□□□ -0.83
HDAC4-206ENST00000460235 VSIG10L2P0DP72 767 aa9.84□□□□□ -0.83
HDAC4-206ENST00000460235 F2RL1P55085 397 aa9.84□□□□□ -0.83
HDAC4-206ENST00000460235 BRWD1-AS2P59051 145 aa9.84□□□□□ -0.83
HDAC4-206ENST00000460235 CYCSP99999 105 aaKnown RBP9.84□□□□□ -0.83
HDAC4-206ENST00000460235 PRSS8Q16651 343 aa9.84□□□□□ -0.83
HDAC4-206ENST00000460235 TATDN3Q17R31 274 aa9.84□□□□□ -0.83
HDAC4-206ENST00000460235 PUSL1Q8N0Z8 303 aaKnown RBP9.84□□□□□ -0.83
HDAC4-206ENST00000460235 FAM71E2Q8N5Q1 922 aa9.84□□□□□ -0.83
HDAC4-206ENST00000460235 Q8N9W7 124 aa9.84□□□□□ -0.83
HDAC4-206ENST00000460235 UXS1Q8NBZ7 420 aa9.84□□□□□ -0.83
HDAC4-206ENST00000460235 OR5B3Q8NH48 314 aa9.84□□□□□ -0.83
HDAC4-206ENST00000460235 OR2T6Q8NHC8 308 aa9.84□□□□□ -0.83
HDAC4-206ENST00000460235 SEC22AQ96IW7 307 aa9.84□□□□□ -0.83
HDAC4-206ENST00000460235 SRSF8Q9BRL6 282 aaKnown RBP9.84□□□□□ -0.83
HDAC4-206ENST00000460235 FBXL15Q9H469 300 aa9.84□□□□□ -0.83
HDAC4-206ENST00000460235 PLSCR3Q9NRY6 295 aa9.84□□□□□ -0.83
HDAC4-206ENST00000460235 ZFP57Q9NU63 452 aa9.84□□□□□ -0.83
HDAC4-206ENST00000460235 COA4Q9NYJ1 87 aa9.84□□□□□ -0.83
HDAC4-206ENST00000460235 MTORP42345 2549 aa9.84□□□□□ -0.83
HDAC4-206ENST00000460235 FAM181BA6NEQ2 426 aa9.83□□□□□ -0.84
HDAC4-206ENST00000460235 SRRM4A7MD48 611 aaKnown RBP9.83□□□□□ -0.84
HDAC4-206ENST00000460235 UPK2O00526 184 aa9.83□□□□□ -0.84
HDAC4-206ENST00000460235 MED6O75586 246 aa9.83□□□□□ -0.84
HDAC4-206ENST00000460235 IGLV2-23P01705 113 aa9.83□□□□□ -0.84
HDAC4-206ENST00000460235 HLA-GP17693 338 aa9.83□□□□□ -0.84
HDAC4-206ENST00000460235 SMCO1Q147U7 214 aa9.83□□□□□ -0.84
HDAC4-206ENST00000460235 C9orf152Q5JTZ5 239 aa9.83□□□□□ -0.84
HDAC4-206ENST00000460235 SLC35E3Q7Z769 313 aa9.83□□□□□ -0.84
HDAC4-206ENST00000460235 SLC35G3Q8N808 338 aa9.83□□□□□ -0.84
HDAC4-206ENST00000460235 OR1L8Q8NGR8 309 aa9.83□□□□□ -0.84
HDAC4-206ENST00000460235 OR4F5Q8NH21 305 aa9.83□□□□□ -0.84
HDAC4-206ENST00000460235 ABHD5Q8WTS1 349 aa9.83□□□□□ -0.84
HDAC4-206ENST00000460235 OR51J1Q9H342 316 aa9.83□□□□□ -0.84
HDAC4-206ENST00000460235 ENY2Q9NPA8 101 aa9.83□□□□□ -0.84
HDAC4-206ENST00000460235 ZNF257Q9Y2Q1 563 aa9.83□□□□□ -0.84
HDAC4-206ENST00000460235 AKAP9Q99996 3911 aa9.83□□□□□ -0.84
HDAC4-206ENST00000460235 C7orf66A4D0T2 115 aa9.82□□□□□ -0.84
HDAC4-206ENST00000460235 AP4M1O00189 453 aa9.82□□□□□ -0.84
HDAC4-206ENST00000460235 TSPAN9O75954 239 aa9.82□□□□□ -0.84
HDAC4-206ENST00000460235 NDUFA7O95182 113 aa9.82□□□□□ -0.84
HDAC4-206ENST00000460235 CRYGBP07316 175 aa9.82□□□□□ -0.84
HDAC4-206ENST00000460235 TNXAQ16473 311 aa9.82□□□□□ -0.84
HDAC4-206ENST00000460235 ANKRD55Q3KP44 614 aa9.82□□□□□ -0.84
HDAC4-206ENST00000460235 GSG1LQ6UXU4 331 aa9.82□□□□□ -0.84
HDAC4-206ENST00000460235 ZNF429Q86V71 674 aa9.82□□□□□ -0.84
HDAC4-206ENST00000460235 OR1S1Q8NH92 325 aa9.82□□□□□ -0.84
HDAC4-206ENST00000460235 ASB13Q8WXK3 278 aa9.82□□□□□ -0.84
HDAC4-206ENST00000460235 DUX5Q96PT3 197 aa9.82□□□□□ -0.84
HDAC4-206ENST00000460235 SEC22CQ9BRL7 303 aa9.82□□□□□ -0.84
HDAC4-206ENST00000460235 MED28Q9H204 178 aa9.82□□□□□ -0.84
HDAC4-206ENST00000460235 ZNF580Q9UK33 172 aa9.82□□□□□ -0.84
HDAC4-206ENST00000460235 FN1P02751 2386 aaKnown RBP9.81□□□□□ -0.84
HDAC4-206ENST00000460235 A0A1W2PN81 502 aa9.81□□□□□ -0.84
HDAC4-206ENST00000460235 C5orf51A6NDU8 294 aa9.81□□□□□ -0.84
HDAC4-206ENST00000460235 C15orf61A6NNL5 157 aa9.81□□□□□ -0.84
HDAC4-206ENST00000460235 FAM90A26D6RGX4 464 aa9.81□□□□□ -0.84
HDAC4-206ENST00000460235 CHST1O43916 411 aa9.81□□□□□ -0.84
HDAC4-206ENST00000460235 IFNA17P01571 189 aa9.81□□□□□ -0.84
HDAC4-206ENST00000460235 IGHG2P01859 326 aa9.81□□□□□ -0.84
HDAC4-206ENST00000460235 HOXB5P09067 269 aa9.81□□□□□ -0.84
HDAC4-206ENST00000460235 SPNP16150 400 aa9.81□□□□□ -0.84
HDAC4-206ENST00000460235 CHRNA7P36544 502 aa9.81□□□□□ -0.84
HDAC4-206ENST00000460235 RPL27AP46776 148 aaKnown RBP9.81□□□□□ -0.84
HDAC4-206ENST00000460235 COMPP49747 757 aaPredicted RBP9.81□□□□□ -0.84
HDAC4-206ENST00000460235 GNB1P62873 340 aa9.81□□□□□ -0.84
HDAC4-206ENST00000460235 SLC35B1P78383 322 aa9.81□□□□□ -0.84
HDAC4-206ENST00000460235 CX3CL1P78423 397 aa9.81□□□□□ -0.84
HDAC4-206ENST00000460235 FXYD3Q14802 87 aa9.81□□□□□ -0.84
HDAC4-206ENST00000460235 GGNBP1Q5YKI7 109 aa9.81□□□□□ -0.84
HDAC4-206ENST00000460235 LYZL2Q7Z4W2 148 aa9.81□□□□□ -0.84
HDAC4-206ENST00000460235 NOXA1Q86UR1 476 aa9.81□□□□□ -0.84
HDAC4-206ENST00000460235 VKORC1L1Q8N0U8 176 aa9.81□□□□□ -0.84
HDAC4-206ENST00000460235 OR52B4Q8NGK2 314 aa9.81□□□□□ -0.84
HDAC4-206ENST00000460235 OR52E5Q8NH55 327 aa9.81□□□□□ -0.84
HDAC4-206ENST00000460235 ARPC1AQ92747 370 aa9.81□□□□□ -0.84
HDAC4-206ENST00000460235 RITA1Q96K30 269 aa9.81□□□□□ -0.84
HDAC4-206ENST00000460235 ZNF430Q9H8G1 570 aaPredicted RBP9.81□□□□□ -0.84
HDAC4-206ENST00000460235 ESM1Q9NQ30 184 aa9.81□□□□□ -0.84
HDAC4-206ENST00000460235 FOXA2Q9Y261 457 aaPredicted RBP9.81□□□□□ -0.84
HDAC4-206ENST00000460235 OR51B2Q9Y5P1 312 aa9.81□□□□□ -0.84
HDAC4-206ENST00000460235 NSD1Q96L73 2696 aaPredicted RBP9.81□□□□□ -0.84
HDAC4-206ENST00000460235 CA2P00918 260 aa9.8□□□□□ -0.84
HDAC4-206ENST00000460235 IGKV1-39P01597 117 aa9.8□□□□□ -0.84
HDAC4-206ENST00000460235 IGKV1-5P01602 117 aa9.8□□□□□ -0.84
HDAC4-206ENST00000460235 IGKV1D-39P04432 117 aa9.8□□□□□ -0.84
HDAC4-206ENST00000460235 IL6RP08887 468 aaPredicted RBP9.8□□□□□ -0.84
HDAC4-206ENST00000460235 TRAPPC2P0DI81 140 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms