RNA–Protein interactions for RNA: ENST00000458516.5

TRIM39-211, Transcript of tripartite motif containing 39, humanhuman

TSL 2

Gene TRIM39, Length 1,003 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-211ENST00000458516 RBPMSQ93062 196 aaKnown RBP13.34□□□□□ -0.27
TRIM39-211ENST00000458516 IL22RA2Q969J5 263 aa13.34□□□□□ -0.27
TRIM39-211ENST00000458516 OR2A7Q96R45 310 aa13.34□□□□□ -0.27
TRIM39-211ENST00000458516 CLCC1Q96S66 551 aa13.34□□□□□ -0.27
TRIM39-211ENST00000458516 HSPB9Q9BQS6 159 aa13.34□□□□□ -0.27
TRIM39-211ENST00000458516 SEC22CQ9BRL7 303 aa13.34□□□□□ -0.27
TRIM39-211ENST00000458516 FCN1O00602 326 aa13.33□□□□□ -0.28
TRIM39-211ENST00000458516 TSPAN9O75954 239 aa13.33□□□□□ -0.28
TRIM39-211ENST00000458516 NDUFA7O95182 113 aa13.33□□□□□ -0.28
TRIM39-211ENST00000458516 CA2P00918 260 aa13.33□□□□□ -0.28
TRIM39-211ENST00000458516 P0C879 139 aa13.33□□□□□ -0.28
TRIM39-211ENST00000458516 SRPXP78539 464 aa13.33□□□□□ -0.28
TRIM39-211ENST00000458516 SSBP2P81877 361 aaPredicted RBP13.33□□□□□ -0.28
TRIM39-211ENST00000458516 PJVKQ0ZLH3 352 aa13.33□□□□□ -0.28
TRIM39-211ENST00000458516 PRSS8Q16651 343 aa13.33□□□□□ -0.28
TRIM39-211ENST00000458516 PPP1R27Q86WC6 154 aa13.33□□□□□ -0.28
TRIM39-211ENST00000458516 ZNF695Q8IW36 515 aa13.33□□□□□ -0.28
TRIM39-211ENST00000458516 CADM3Q8N126 398 aa13.33□□□□□ -0.28
TRIM39-211ENST00000458516 LGI3Q8N145 548 aa13.33□□□□□ -0.28
TRIM39-211ENST00000458516 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.33□□□□□ -0.28
TRIM39-211ENST00000458516 LRTM2Q8N967 370 aa13.33□□□□□ -0.28
TRIM39-211ENST00000458516 OR4A5Q8NH83 315 aa13.33□□□□□ -0.28
TRIM39-211ENST00000458516 PRSS22Q9GZN4 317 aa13.33□□□□□ -0.28
TRIM39-211ENST00000458516 ZNF430Q9H8G1 570 aaPredicted RBP13.33□□□□□ -0.28
TRIM39-211ENST00000458516 IGHV7-81A0A0B4J1V7 117 aa13.32□□□□□ -0.28
TRIM39-211ENST00000458516 TRAV3A0A0B4J244 114 aa13.32□□□□□ -0.28
TRIM39-211ENST00000458516 A0A0G2JRQ6 117 aa13.32□□□□□ -0.28
TRIM39-211ENST00000458516 UPK2O00526 184 aa13.32□□□□□ -0.28
TRIM39-211ENST00000458516 DUS4LO95620 317 aaKnown RBP13.32□□□□□ -0.28
TRIM39-211ENST00000458516 IL5P05113 134 aa13.32□□□□□ -0.28
TRIM39-211ENST00000458516 OR9G9P0C7N8 305 aa13.32□□□□□ -0.28
TRIM39-211ENST00000458516 AKR1C2P52895 323 aa13.32□□□□□ -0.28
TRIM39-211ENST00000458516 NDPQ00604 133 aa13.32□□□□□ -0.28
TRIM39-211ENST00000458516 OXA1LQ15070 435 aa13.32□□□□□ -0.28
TRIM39-211ENST00000458516 KRTAP24-1Q3LI83 254 aa13.32□□□□□ -0.28
TRIM39-211ENST00000458516 C9orf152Q5JTZ5 239 aa13.32□□□□□ -0.28
TRIM39-211ENST00000458516 SLC35G3Q8N808 338 aa13.32□□□□□ -0.28
TRIM39-211ENST00000458516 NF1P21359 2839 aa13.32□□□□□ -0.28
TRIM39-211ENST00000458516 A0A0B4J2A0 478 aa13.31□□□□□ -0.28
TRIM39-211ENST00000458516 LINC01548A6NM66 108 aa13.31□□□□□ -0.28
TRIM39-211ENST00000458516 ATG12O94817 140 aa13.31□□□□□ -0.28
TRIM39-211ENST00000458516 IGHG2P01859 326 aa13.31□□□□□ -0.28
TRIM39-211ENST00000458516 HKR1P10072 659 aa13.31□□□□□ -0.28
TRIM39-211ENST00000458516 CX3CL1P78423 397 aa13.31□□□□□ -0.28
TRIM39-211ENST00000458516 IZUMO4Q1ZYL8 232 aa13.31□□□□□ -0.28
TRIM39-211ENST00000458516 TMEM95Q3KNT9 176 aa13.31□□□□□ -0.28
TRIM39-211ENST00000458516 H2BFWTQ7Z2G1 175 aa13.31□□□□□ -0.28
TRIM39-211ENST00000458516 MMD2Q8IY49 270 aa13.31□□□□□ -0.28
TRIM39-211ENST00000458516 ZNF431Q8TF32 576 aaPredicted RBP13.31□□□□□ -0.28
TRIM39-211ENST00000458516 C16orf95Q9H693 158 aa13.31□□□□□ -0.28
TRIM39-211ENST00000458516 SHPKQ9UHJ6 478 aa13.31□□□□□ -0.28
TRIM39-211ENST00000458516 MMP24Q9Y5R2 645 aa13.31□□□□□ -0.28
TRIM39-211ENST00000458516 DUXBA0A1W2PPF3 345 aa13.3□□□□□ -0.28
TRIM39-211ENST00000458516 PRAF2O60831 178 aa13.3□□□□□ -0.28
TRIM39-211ENST00000458516 ZNF562Q6V9R5 426 aa13.3□□□□□ -0.28
TRIM39-211ENST00000458516 LYZL2Q7Z4W2 148 aa13.3□□□□□ -0.28
TRIM39-211ENST00000458516 SLC35E3Q7Z769 313 aa13.3□□□□□ -0.28
TRIM39-211ENST00000458516 COQ8AQ8NI60 647 aa13.3□□□□□ -0.28
TRIM39-211ENST00000458516 MITD1Q8WV92 249 aa13.3□□□□□ -0.28
TRIM39-211ENST00000458516 OR51J1Q9H342 316 aa13.3□□□□□ -0.28
TRIM39-211ENST00000458516 NSG2Q9Y328 171 aa13.3□□□□□ -0.28
TRIM39-211ENST00000458516 A0A0B4J293 547 aa13.29□□□□□ -0.28
TRIM39-211ENST00000458516 KCNAB3O43448 404 aa13.29□□□□□ -0.28
TRIM39-211ENST00000458516 CREBL2O60519 120 aaPredicted RBP13.29□□□□□ -0.28
TRIM39-211ENST00000458516 DHFRP00374 187 aa13.29□□□□□ -0.28
TRIM39-211ENST00000458516 FGF2P09038 288 aa13.29□□□□□ -0.28
TRIM39-211ENST00000458516 MYOD1P15172 320 aa13.29□□□□□ -0.28
TRIM39-211ENST00000458516 VDAC1P21796 283 aa13.29□□□□□ -0.28
TRIM39-211ENST00000458516 GNB1P62873 340 aa13.29□□□□□ -0.28
TRIM39-211ENST00000458516 RPL8P62917 257 aaKnown RBP13.29□□□□□ -0.28
TRIM39-211ENST00000458516 TNXAQ16473 311 aa13.29□□□□□ -0.28
TRIM39-211ENST00000458516 NMSQ5H8A3 153 aa13.29□□□□□ -0.28
TRIM39-211ENST00000458516 C10orf55Q5SWW7 151 aa13.29□□□□□ -0.28
TRIM39-211ENST00000458516 FAM219AQ8IW50 185 aa13.29□□□□□ -0.28
TRIM39-211ENST00000458516 RNASE11Q8TAA1 199 aaKnown RBP13.29□□□□□ -0.28
TRIM39-211ENST00000458516 LSM10Q969L4 123 aaKnown RBP13.29□□□□□ -0.28
TRIM39-211ENST00000458516 GPR146Q96CH1 333 aa13.29□□□□□ -0.28
TRIM39-211ENST00000458516 RRNAD1Q96FB5 475 aaKnown RBP13.29□□□□□ -0.28
TRIM39-211ENST00000458516 SERTAD4Q9NUC0 356 aa13.29□□□□□ -0.28
TRIM39-211ENST00000458516 FBXO7Q9Y3I1 522 aa13.29□□□□□ -0.28
TRIM39-211ENST00000458516 DBX1A6NMT0 343 aa13.28□□□□□ -0.28
TRIM39-211ENST00000458516 C15orf61A6NNL5 157 aa13.28□□□□□ -0.28
TRIM39-211ENST00000458516 ATP6V0E1O15342 81 aa13.28□□□□□ -0.28
TRIM39-211ENST00000458516 HLA-GP17693 338 aa13.28□□□□□ -0.28
TRIM39-211ENST00000458516 MAS1LP35410 378 aa13.28□□□□□ -0.28
TRIM39-211ENST00000458516 VDAC2P45880 294 aaPredicted RBP13.28□□□□□ -0.28
TRIM39-211ENST00000458516 OR2B8PP59922 312 aa13.28□□□□□ -0.28
TRIM39-211ENST00000458516 FXYD3Q14802 87 aa13.28□□□□□ -0.28
TRIM39-211ENST00000458516 ARSJQ5FYB0 599 aaPredicted RBP13.28□□□□□ -0.28
TRIM39-211ENST00000458516 Q6ZRM9 215 aa13.28□□□□□ -0.28
TRIM39-211ENST00000458516 OR4F5Q8NH21 305 aa13.28□□□□□ -0.28
TRIM39-211ENST00000458516 OR2T6Q8NHC8 308 aa13.28□□□□□ -0.28
TRIM39-211ENST00000458516 LINC01006Q8NI28 216 aa13.28□□□□□ -0.28
TRIM39-211ENST00000458516 CHPT1Q8WUD6 406 aa13.28□□□□□ -0.28
TRIM39-211ENST00000458516 ARPC1AQ92747 370 aa13.28□□□□□ -0.28
TRIM39-211ENST00000458516 PHB2Q99623 299 aa13.28□□□□□ -0.28
TRIM39-211ENST00000458516 GPN1Q9HCN4 374 aaPredicted RBP13.28□□□□□ -0.28
TRIM39-211ENST00000458516 PIGBOS1A0A0B4J2F0 54 aa13.27□□□□□ -0.29
TRIM39-211ENST00000458516 SNRPGP15A8MWD9 76 aa13.27□□□□□ -0.29
TRIM39-211ENST00000458516 ADAP1O75689 374 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms