RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 UTF1Q5T230 341 aa10.31□□□□□ -0.76
LINC00959-201ENST00000456581 SPACA3Q8IXA5 215 aa10.31□□□□□ -0.76
LINC00959-201ENST00000456581 C1orf162Q8NEQ5 155 aaPredicted RBP10.31□□□□□ -0.76
LINC00959-201ENST00000456581 NPCDR1Q9BY65 106 aa10.31□□□□□ -0.76
LINC00959-201ENST00000456581 TMEM242Q9NWH2 141 aa10.31□□□□□ -0.76
LINC00959-201ENST00000456581 DSCAMO60469 2012 aa10.31□□□□□ -0.76
LINC00959-201ENST00000456581 LRRC30A6NM36 301 aa10.31□□□□□ -0.76
LINC00959-201ENST00000456581 PMS2P5A8MQ11 134 aa10.31□□□□□ -0.76
LINC00959-201ENST00000456581 TSTD3H0UI37 97 aa10.31□□□□□ -0.76
LINC00959-201ENST00000456581 HAND1O96004 215 aa10.31□□□□□ -0.76
LINC00959-201ENST00000456581 GCH1P30793 250 aa10.31□□□□□ -0.76
LINC00959-201ENST00000456581 GABRA2P47869 451 aa10.31□□□□□ -0.76
LINC00959-201ENST00000456581 PSMB3P49720 205 aa10.31□□□□□ -0.76
LINC00959-201ENST00000456581 EDDM3BP56851 147 aa10.31□□□□□ -0.76
LINC00959-201ENST00000456581 Q8IYB0 196 aa10.31□□□□□ -0.76
LINC00959-201ENST00000456581 SRD5A3Q9H8P0 318 aa10.31□□□□□ -0.76
LINC00959-201ENST00000456581 GRIFINA4D1Z8 144 aa10.3□□□□□ -0.76
LINC00959-201ENST00000456581 HBZP02008 142 aa10.3□□□□□ -0.76
LINC00959-201ENST00000456581 C1orf185Q5T7R7 199 aa10.3□□□□□ -0.76
LINC00959-201ENST00000456581 FAM78BQ5VT40 261 aa10.3□□□□□ -0.76
LINC00959-201ENST00000456581 CST9LP1Q5W188 147 aa10.3□□□□□ -0.76
LINC00959-201ENST00000456581 WDR82Q6UXN9 313 aa10.3□□□□□ -0.76
LINC00959-201ENST00000456581 OR2Z1Q8NG97 314 aa10.3□□□□□ -0.76
LINC00959-201ENST00000456581 DTD1Q8TEA8 209 aa10.3□□□□□ -0.76
LINC00959-201ENST00000456581 P2RX4Q99571 388 aa10.3□□□□□ -0.76
LINC00959-201ENST00000456581 MKRN2OSH3BPM6 223 aa10.3□□□□□ -0.76
LINC00959-201ENST00000456581 IFNA1P01562 189 aa10.3□□□□□ -0.76
LINC00959-201ENST00000456581 ZNF718Q3SXZ3 478 aa10.3□□□□□ -0.76
LINC00959-201ENST00000456581 Q8NA96 180 aa10.3□□□□□ -0.76
LINC00959-201ENST00000456581 QTRT1Q9BXR0 403 aaKnown RBP10.3□□□□□ -0.76
LINC00959-201ENST00000456581 HSPB7Q9UBY9 170 aa10.3□□□□□ -0.76
LINC00959-201ENST00000456581 PLXNB1O43157 2135 aa10.3□□□□□ -0.76
LINC00959-201ENST00000456581 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.29□□□□□ -0.76
LINC00959-201ENST00000456581 C11orf94C9JXX5 98 aa10.29□□□□□ -0.76
LINC00959-201ENST00000456581 TAS2R60P59551 318 aa10.29□□□□□ -0.76
LINC00959-201ENST00000456581 EDDM3AQ14507 147 aa10.29□□□□□ -0.76
LINC00959-201ENST00000456581 ZNF146Q15072 292 aa10.29□□□□□ -0.76
LINC00959-201ENST00000456581 FAM201AQ5SY85 155 aa10.29□□□□□ -0.76
LINC00959-201ENST00000456581 COQ2Q96H96 371 aa10.29□□□□□ -0.76
LINC00959-201ENST00000456581 IMMP2LQ96T52 175 aa10.29□□□□□ -0.76
LINC00959-201ENST00000456581 PSG11Q9UQ72 335 aa10.29□□□□□ -0.76
LINC00959-201ENST00000456581 PIEZO1Q92508 2521 aa10.29□□□□□ -0.76
LINC00959-201ENST00000456581 SPTAN1Q13813 2472 aaKnown RBP10.29□□□□□ -0.76
LINC00959-201ENST00000456581 A6NNC1 897 aa10.29□□□□□ -0.76
LINC00959-201ENST00000456581 NDUFB4O95168 129 aa10.29□□□□□ -0.76
LINC00959-201ENST00000456581 PINX1Q96BK5 328 aaKnown RBP10.29□□□□□ -0.76
LINC00959-201ENST00000456581 OR5B12Q96R08 314 aa10.29□□□□□ -0.76
LINC00959-201ENST00000456581 SNHG12Q9BXW3 62 aa10.29□□□□□ -0.76
LINC00959-201ENST00000456581 CXXC4Q9H2H0 198 aa10.29□□□□□ -0.76
LINC00959-201ENST00000456581 MBNL3Q9NUK0 354 aaKnown RBP10.29□□□□□ -0.76
LINC00959-201ENST00000456581 TRBV20OR9-2A0A075B6H5 130 aa10.29□□□□□ -0.76
LINC00959-201ENST00000456581 CTXND1A0A1B0GTU2 59 aa10.29□□□□□ -0.76
LINC00959-201ENST00000456581 NPIPB11E5RHQ5 1161 aa10.29□□□□□ -0.76
LINC00959-201ENST00000456581 F2Z2F3 143 aa10.29□□□□□ -0.76
LINC00959-201ENST00000456581 RBFOX2O43251 390 aaKnown RBP eCLIP10.29□□□□□ -0.76
LINC00959-201ENST00000456581 PAX1P15863 534 aa10.29□□□□□ -0.76
LINC00959-201ENST00000456581 THBS3P49746 956 aa10.29□□□□□ -0.76
LINC00959-201ENST00000456581 GNB1P62873 340 aa10.29□□□□□ -0.76
LINC00959-201ENST00000456581 ZNF645Q8N7E2 425 aa10.29□□□□□ -0.76
LINC00959-201ENST00000456581 OR10P1Q8NGE3 313 aa10.29□□□□□ -0.76
LINC00959-201ENST00000456581 OR13A1Q8NGR1 328 aa10.29□□□□□ -0.76
LINC00959-201ENST00000456581 GALMQ96C23 342 aa10.29□□□□□ -0.76
LINC00959-201ENST00000456581 COL12A1Q99715 3063 aa10.29□□□□□ -0.76
LINC00959-201ENST00000456581 ANKHD1Q8IWZ3 2542 aaKnown RBP10.28□□□□□ -0.76
LINC00959-201ENST00000456581 SVEP1Q4LDE5 3571 aa10.28□□□□□ -0.76
LINC00959-201ENST00000456581 IGHV3OR15-7A0A075B7D8 119 aa10.28□□□□□ -0.76
LINC00959-201ENST00000456581 TMEM210A6NLX4 147 aa10.28□□□□□ -0.76
LINC00959-201ENST00000456581 HRASP01112 189 aa10.28□□□□□ -0.76
LINC00959-201ENST00000456581 OR9G9P0C7N8 305 aa10.28□□□□□ -0.76
LINC00959-201ENST00000456581 FAM87AP0C7U9 286 aa10.28□□□□□ -0.76
LINC00959-201ENST00000456581 CTDSP1Q9GZU7 261 aa10.28□□□□□ -0.76
LINC00959-201ENST00000456581 CRYABP02511 175 aaKnown RBP10.28□□□□□ -0.76
LINC00959-201ENST00000456581 KITLGP21583 273 aa10.28□□□□□ -0.76
LINC00959-201ENST00000456581 PRR31Q5SQ13 230 aa10.28□□□□□ -0.76
LINC00959-201ENST00000456581 ACP7Q6ZNF0 438 aa10.28□□□□□ -0.76
LINC00959-201ENST00000456581 DOLPP1Q86YN1 238 aa10.28□□□□□ -0.76
LINC00959-201ENST00000456581 MRPL41Q8IXM3 137 aaKnown RBP10.28□□□□□ -0.76
LINC00959-201ENST00000456581 Q8N7P7 452 aa10.28□□□□□ -0.76
LINC00959-201ENST00000456581 LRRC29Q8WV35 223 aa10.28□□□□□ -0.76
LINC00959-201ENST00000456581 LEAP2Q969E1 77 aa10.28□□□□□ -0.76
LINC00959-201ENST00000456581 PYGO2Q9BRQ0 406 aa10.28□□□□□ -0.76
LINC00959-201ENST00000456581 TMEM147Q9BVK8 224 aa10.28□□□□□ -0.76
LINC00959-201ENST00000456581 HES4Q9HCC6 221 aa10.28□□□□□ -0.76
LINC00959-201ENST00000456581 TRAV3A0A0B4J244 114 aa10.27□□□□□ -0.77
LINC00959-201ENST00000456581 SPRY3O43610 288 aa10.27□□□□□ -0.77
LINC00959-201ENST00000456581 IFNA10P01566 189 aa10.27□□□□□ -0.77
LINC00959-201ENST00000456581 P0C879 139 aa10.27□□□□□ -0.77
LINC00959-201ENST00000456581 IL3RAP26951 378 aa10.27□□□□□ -0.77
LINC00959-201ENST00000456581 CCKARP32238 428 aa10.27□□□□□ -0.77
LINC00959-201ENST00000456581 H2BFWTQ7Z2G1 175 aa10.27□□□□□ -0.77
LINC00959-201ENST00000456581 OR2T10Q8NGZ9 312 aa10.27□□□□□ -0.77
LINC00959-201ENST00000456581 FAM57AQ8TBR7 257 aa10.27□□□□□ -0.77
LINC00959-201ENST00000456581 WIPI2Q9Y4P8 454 aa10.27□□□□□ -0.77
LINC00959-201ENST00000456581 TCAPO15273 167 aa10.27□□□□□ -0.77
LINC00959-201ENST00000456581 TGIF2LYQ8IUE0 185 aa10.27□□□□□ -0.77
LINC00959-201ENST00000456581 AGMATQ9BSE5 352 aa10.27□□□□□ -0.77
LINC00959-201ENST00000456581 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.27□□□□□ -0.77
LINC00959-201ENST00000456581 KCNIP1Q9NZI2 227 aa10.27□□□□□ -0.77
LINC00959-201ENST00000456581 YLPM1P49750 1951 aaKnown RBP10.26□□□□□ -0.77
LINC00959-201ENST00000456581 A0A0G2JNJ9 132 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms