RNA–Protein interactions for RNA: ENST00000454583.6

RIF1-207, Transcript of replication timing regulatory factor 1, humanhuman

TSL 2

Gene RIF1, Length 3,552 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-207ENST00000454583 ZNF66Q6ZN08 573 aa3.93□□□□□ -1.78
RIF1-207ENST00000454583 MALSU1Q96EH3 234 aa3.93□□□□□ -1.78
RIF1-207ENST00000454583 LRRC46Q96FV0 321 aa3.93□□□□□ -1.78
RIF1-207ENST00000454583 TUBA4BQ9H853 241 aa3.93□□□□□ -1.78
RIF1-207ENST00000454583 ESM1Q9NQ30 184 aa3.93□□□□□ -1.78
RIF1-207ENST00000454583 PSG11Q9UQ72 335 aa3.93□□□□□ -1.78
RIF1-207ENST00000454583 TBL2Q9Y4P3 447 aaKnown RBP3.93□□□□□ -1.78
RIF1-207ENST00000454583 SVILO95425 2214 aa3.93□□□□□ -1.78
RIF1-207ENST00000454583 VPS13DQ5THJ4 4388 aa3.93□□□□□ -1.78
RIF1-207ENST00000454583 ICE1Q9Y2F5 2266 aa3.93□□□□□ -1.78
RIF1-207ENST00000454583 DNAH2Q9P225 4427 aa3.93□□□□□ -1.78
RIF1-207ENST00000454583 IGHV3-64DA0A0J9YX35 117 aa3.93□□□□□ -1.78
RIF1-207ENST00000454583 MEX3AA1L020 520 aaKnown RBP3.93□□□□□ -1.78
RIF1-207ENST00000454583 FNDC10F2Z333 226 aa3.93□□□□□ -1.78
RIF1-207ENST00000454583 J3QLI3 93 aa3.93□□□□□ -1.78
RIF1-207ENST00000454583 COX6B1P14854 86 aa3.93□□□□□ -1.78
RIF1-207ENST00000454583 PDLIM4P50479 330 aa3.93□□□□□ -1.78
RIF1-207ENST00000454583 NKAPLQ5M9Q1 402 aa3.93□□□□□ -1.78
RIF1-207ENST00000454583 PRAMEF5Q5TYX0 476 aa3.93□□□□□ -1.78
RIF1-207ENST00000454583 Q6YL49 198 aa3.93□□□□□ -1.78
RIF1-207ENST00000454583 DCUN1D4Q92564 292 aa3.93□□□□□ -1.78
RIF1-207ENST00000454583 TPSG1Q9NRR2 321 aa3.93□□□□□ -1.78
RIF1-207ENST00000454583 MAP1AP78559 2803 aaPredicted RBP3.92□□□□□ -1.78
RIF1-207ENST00000454583 CNTRLQ7Z7A1 2325 aa3.92□□□□□ -1.78
RIF1-207ENST00000454583 RAB29O14966 203 aa3.92□□□□□ -1.78
RIF1-207ENST00000454583 ADAM20O43506 726 aa3.92□□□□□ -1.78
RIF1-207ENST00000454583 CHST1O43916 411 aa3.92□□□□□ -1.78
RIF1-207ENST00000454583 JTBO76095 146 aa3.92□□□□□ -1.78
RIF1-207ENST00000454583 SPDEFO95238 335 aa3.92□□□□□ -1.78
RIF1-207ENST00000454583 IGKV1-16P04430 117 aa3.92□□□□□ -1.78
RIF1-207ENST00000454583 CRYGCP07315 174 aa3.92□□□□□ -1.78
RIF1-207ENST00000454583 IGHV4-38-2P0DP08 117 aa3.92□□□□□ -1.78
RIF1-207ENST00000454583 TPT1P13693 172 aaKnown RBP3.92□□□□□ -1.78
RIF1-207ENST00000454583 CCL20P78556 96 aa3.92□□□□□ -1.78
RIF1-207ENST00000454583 AVPI1Q5T686 147 aa3.92□□□□□ -1.78
RIF1-207ENST00000454583 PDZD9Q8IXQ8 264 aa3.92□□□□□ -1.78
RIF1-207ENST00000454583 SPAG16Q8N0X2 631 aa3.92□□□□□ -1.78
RIF1-207ENST00000454583 TOMM40LQ969M1 308 aa3.92□□□□□ -1.78
RIF1-207ENST00000454583 ZNF714Q96N38 554 aa3.92□□□□□ -1.78
RIF1-207ENST00000454583 ABHD14AQ9BUJ0 271 aa3.92□□□□□ -1.78
RIF1-207ENST00000454583 WNT10AQ9GZT5 417 aa3.92□□□□□ -1.78
RIF1-207ENST00000454583 SMDT1Q9H4I9 107 aa3.92□□□□□ -1.78
RIF1-207ENST00000454583 OR6C3Q9NZP0 311 aa3.92□□□□□ -1.78
RIF1-207ENST00000454583 TRBV9A0A0B4J1U6 114 aa3.92□□□□□ -1.78
RIF1-207ENST00000454583 HSD17B6O14756 317 aa3.92□□□□□ -1.78
RIF1-207ENST00000454583 SCO1O75880 301 aa3.92□□□□□ -1.78
RIF1-207ENST00000454583 OR7C1O76099 320 aaPredicted RBP3.92□□□□□ -1.78
RIF1-207ENST00000454583 OR8U9P0C7N5 309 aa3.92□□□□□ -1.78
RIF1-207ENST00000454583 OR9G9P0C7N8 305 aa3.92□□□□□ -1.78
RIF1-207ENST00000454583 GATA3P23771 443 aa3.92□□□□□ -1.78
RIF1-207ENST00000454583 KRTAP10-3P60369 221 aa3.92□□□□□ -1.78
RIF1-207ENST00000454583 ARFRP1Q13795 201 aa3.92□□□□□ -1.78
RIF1-207ENST00000454583 ICAM4Q14773 271 aa3.92□□□□□ -1.78
RIF1-207ENST00000454583 SMCO1Q147U7 214 aa3.92□□□□□ -1.78
RIF1-207ENST00000454583 TPTE2P1Q5T6R2 138 aa3.92□□□□□ -1.78
RIF1-207ENST00000454583 PXDC1Q5TGL8 231 aa3.92□□□□□ -1.78
RIF1-207ENST00000454583 CCDC28AQ8IWP9 274 aa3.92□□□□□ -1.78
RIF1-207ENST00000454583 OR2C3Q8N628 320 aa3.92□□□□□ -1.78
RIF1-207ENST00000454583 COMMD1Q8N668 190 aa3.92□□□□□ -1.78
RIF1-207ENST00000454583 OR8U1Q8NH10 309 aa3.92□□□□□ -1.78
RIF1-207ENST00000454583 MRGPRDQ8TDS7 321 aa3.92□□□□□ -1.78
RIF1-207ENST00000454583 RNF141Q8WVD5 230 aa3.92□□□□□ -1.78
RIF1-207ENST00000454583 MARC2Q969Z3 335 aa3.92□□□□□ -1.78
RIF1-207ENST00000454583 UQCC1Q9NVA1 299 aa3.92□□□□□ -1.78
RIF1-207ENST00000454583 C14orf166Q9Y224 244 aaKnown RBP3.92□□□□□ -1.78
RIF1-207ENST00000454583 FOXA2Q9Y261 457 aaPredicted RBP3.92□□□□□ -1.78
RIF1-207ENST00000454583 PKD1P98161 4303 aa3.92□□□□□ -1.78
RIF1-207ENST00000454583 FAM74A7A6NL05 159 aa3.92□□□□□ -1.78
RIF1-207ENST00000454583 LRRC30A6NM36 301 aa3.92□□□□□ -1.78
RIF1-207ENST00000454583 FOSL1P15407 271 aa3.92□□□□□ -1.78
RIF1-207ENST00000454583 PPIFP30405 207 aaKnown RBP3.92□□□□□ -1.78
RIF1-207ENST00000454583 PPP1CCP36873 323 aaKnown RBP3.92□□□□□ -1.78
RIF1-207ENST00000454583 CLEC12BQ2HXU8 276 aa3.92□□□□□ -1.78
RIF1-207ENST00000454583 FAM74A3Q4VXF1 159 aa3.92□□□□□ -1.78
RIF1-207ENST00000454583 RPL39P5Q59GN2 51 aa3.92□□□□□ -1.78
RIF1-207ENST00000454583 MINOS1Q5TGZ0 78 aa3.92□□□□□ -1.78
RIF1-207ENST00000454583 FAM90A2PQ658T7 463 aa3.92□□□□□ -1.78
RIF1-207ENST00000454583 LHFPL4Q7Z7J7 247 aa3.92□□□□□ -1.78
RIF1-207ENST00000454583 COMMD2Q86X83 199 aa3.92□□□□□ -1.78
RIF1-207ENST00000454583 PNKDQ8N490 385 aa3.92□□□□□ -1.78
RIF1-207ENST00000454583 CCDC71LQ8N9Z2 235 aa3.92□□□□□ -1.78
RIF1-207ENST00000454583 PPP1R35Q8TAP8 253 aa3.92□□□□□ -1.78
RIF1-207ENST00000454583 KCNIP1Q9NZI2 227 aa3.92□□□□□ -1.78
RIF1-207ENST00000454583 FBXO7Q9Y3I1 522 aa3.92□□□□□ -1.78
RIF1-207ENST00000454583 MINOS1-NBL1R4GNA1 71 aa3.92□□□□□ -1.78
RIF1-207ENST00000454583 FLNAP21333 2647 aaKnown RBP3.91□□□□□ -1.78
RIF1-207ENST00000454583 IGHV1-3A0A0C4DH29 117 aa3.91□□□□□ -1.78
RIF1-207ENST00000454583 IFNA6P05013 189 aa3.91□□□□□ -1.78
RIF1-207ENST00000454583 MSMBP08118 114 aa3.91□□□□□ -1.78
RIF1-207ENST00000454583 PET100P0DJ07 73 aa3.91□□□□□ -1.78
RIF1-207ENST00000454583 C4BPBP20851 252 aa3.91□□□□□ -1.78
RIF1-207ENST00000454583 ARPC4P59998 168 aa3.91□□□□□ -1.78
RIF1-207ENST00000454583 GMFBP60983 142 aa3.91□□□□□ -1.78
RIF1-207ENST00000454583 TNFRSF9Q07011 255 aa3.91□□□□□ -1.78
RIF1-207ENST00000454583 PHLDA2Q53GA4 152 aa3.91□□□□□ -1.78
RIF1-207ENST00000454583 ZNF506Q5JVG8 444 aa3.91□□□□□ -1.78
RIF1-207ENST00000454583 Q5PR19 223 aa3.91□□□□□ -1.78
RIF1-207ENST00000454583 TREML4Q6UXN2 200 aa3.91□□□□□ -1.78
RIF1-207ENST00000454583 C1orf87Q8N0U7 546 aa3.91□□□□□ -1.78
RIF1-207ENST00000454583 Q8N9W7 124 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms