RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 FOXB2Q5VYV0 432 aa11.02□□□□□ -0.65
HDAC4-205ENST00000454542 STEAP1BQ6NZ63 245 aa11.02□□□□□ -0.65
HDAC4-205ENST00000454542 LPCAT3Q6P1A2 487 aa11.02□□□□□ -0.65
HDAC4-205ENST00000454542 CCDC190Q86UF4 302 aa11.02□□□□□ -0.65
HDAC4-205ENST00000454542 CMTM1Q8IZ96 169 aa11.02□□□□□ -0.65
HDAC4-205ENST00000454542 CADM3Q8N126 398 aa11.02□□□□□ -0.65
HDAC4-205ENST00000454542 TRIM63Q969Q1 353 aa11.02□□□□□ -0.65
HDAC4-205ENST00000454542 MRGPRFQ96AM1 343 aa11.02□□□□□ -0.65
HDAC4-205ENST00000454542 ZNF486Q96H40 463 aaPredicted RBP11.02□□□□□ -0.65
HDAC4-205ENST00000454542 OR2A7Q96R45 310 aa11.02□□□□□ -0.65
HDAC4-205ENST00000454542 ANKRD20A5PA0PJZ0 165 aa11.01□□□□□ -0.65
HDAC4-205ENST00000454542 NUDT19A8MXV4 375 aa11.01□□□□□ -0.65
HDAC4-205ENST00000454542 I3L521 148 aa11.01□□□□□ -0.65
HDAC4-205ENST00000454542 RAB3DO95716 219 aa11.01□□□□□ -0.65
HDAC4-205ENST00000454542 NQO2P16083 231 aa11.01□□□□□ -0.65
HDAC4-205ENST00000454542 MAS1LP35410 378 aa11.01□□□□□ -0.65
HDAC4-205ENST00000454542 MYCNOSP40205 109 aa11.01□□□□□ -0.65
HDAC4-205ENST00000454542 GNB1P62873 340 aa11.01□□□□□ -0.65
HDAC4-205ENST00000454542 MEF2DQ14814 521 aa11.01□□□□□ -0.65
HDAC4-205ENST00000454542 ZNF79Q15937 498 aa11.01□□□□□ -0.65
HDAC4-205ENST00000454542 TNXAQ16473 311 aa11.01□□□□□ -0.65
HDAC4-205ENST00000454542 ZNF585BQ52M93 769 aa11.01□□□□□ -0.65
HDAC4-205ENST00000454542 C10orf55Q5SWW7 151 aa11.01□□□□□ -0.65
HDAC4-205ENST00000454542 OR4A47Q6IF82 309 aa11.01□□□□□ -0.65
HDAC4-205ENST00000454542 MRPL41Q8IXM3 137 aaKnown RBP11.01□□□□□ -0.65
HDAC4-205ENST00000454542 POC5Q8NA72 575 aa11.01□□□□□ -0.65
HDAC4-205ENST00000454542 OR4A5Q8NH83 315 aa11.01□□□□□ -0.65
HDAC4-205ENST00000454542 DGCR14Q96DF8 476 aaKnown RBP11.01□□□□□ -0.65
HDAC4-205ENST00000454542 RAX2Q96IS3 184 aa11.01□□□□□ -0.65
HDAC4-205ENST00000454542 SLA2Q9H6Q3 261 aa11.01□□□□□ -0.65
HDAC4-205ENST00000454542 GNB4Q9HAV0 340 aa11.01□□□□□ -0.65
HDAC4-205ENST00000454542 SLC2A9Q9NRM0 540 aa11.01□□□□□ -0.65
HDAC4-205ENST00000454542 NDUFA13Q9P0J0 144 aa11.01□□□□□ -0.65
HDAC4-205ENST00000454542 A0A1B0GW64 132 aa11□□□□□ -0.65
HDAC4-205ENST00000454542 FABP12A6NFH5 140 aa11□□□□□ -0.65
HDAC4-205ENST00000454542 TEX22C9J3V5 150 aa11□□□□□ -0.65
HDAC4-205ENST00000454542 CNIH1O95406 144 aa11□□□□□ -0.65
HDAC4-205ENST00000454542 IFNA6P05013 189 aa11□□□□□ -0.65
HDAC4-205ENST00000454542 PTBP1P26599 531 aaKnown RBP eCLIP11□□□□□ -0.65
HDAC4-205ENST00000454542 ETV6P41212 452 aa11□□□□□ -0.65
HDAC4-205ENST00000454542 PHLDA2Q53GA4 152 aa11□□□□□ -0.65
HDAC4-205ENST00000454542 OR4C16Q8NGL9 310 aa11□□□□□ -0.65
HDAC4-205ENST00000454542 AIFM2Q9BRQ8 373 aa11□□□□□ -0.65
HDAC4-205ENST00000454542 SLC2A8Q9NY64 477 aa11□□□□□ -0.65
HDAC4-205ENST00000454542 VSIG4Q9Y279 399 aa11□□□□□ -0.65
HDAC4-205ENST00000454542 PRKDCP78527 4128 aaKnown RBP11□□□□□ -0.65
HDAC4-205ENST00000454542 NOTCH1P46531 2555 aa10.99□□□□□ -0.65
HDAC4-205ENST00000454542 DPPA5A6NC42 116 aa10.99□□□□□ -0.65
HDAC4-205ENST00000454542 CGB1A6NKQ9 187 aa10.99□□□□□ -0.65
HDAC4-205ENST00000454542 MARCH11A6NNE9 402 aa10.99□□□□□ -0.65
HDAC4-205ENST00000454542 CCL24O00175 119 aa10.99□□□□□ -0.65
HDAC4-205ENST00000454542 AKAIN1P0CW23 69 aa10.99□□□□□ -0.65
HDAC4-205ENST00000454542 RPL8P62917 257 aaKnown RBP10.99□□□□□ -0.65
HDAC4-205ENST00000454542 DEFB136Q30KP8 78 aa10.99□□□□□ -0.65
HDAC4-205ENST00000454542 BEAN1Q3B7T3 259 aa10.99□□□□□ -0.65
HDAC4-205ENST00000454542 FAAP20Q6NZ36 180 aa10.99□□□□□ -0.65
HDAC4-205ENST00000454542 TMEM65Q6PI78 240 aa10.99□□□□□ -0.65
HDAC4-205ENST00000454542 SSX9Q7RTT3 188 aa10.99□□□□□ -0.65
HDAC4-205ENST00000454542 TBC1D26Q86UD7 250 aa10.99□□□□□ -0.65
HDAC4-205ENST00000454542 ADAD2Q8NCV1 583 aaKnown RBP10.99□□□□□ -0.65
HDAC4-205ENST00000454542 TERB2Q8NHR7 220 aa10.99□□□□□ -0.65
HDAC4-205ENST00000454542 CASTOR1Q8WTX7 329 aa10.99□□□□□ -0.65
HDAC4-205ENST00000454542 TMEM140Q9NV12 185 aa10.99□□□□□ -0.65
HDAC4-205ENST00000454542 MSGN1A6NI15 193 aa10.98□□□□□ -0.65
HDAC4-205ENST00000454542 E7EUB6 86 aa10.98□□□□□ -0.65
HDAC4-205ENST00000454542 G3V4G9 280 aa10.98□□□□□ -0.65
HDAC4-205ENST00000454542 UPK2O00526 184 aa10.98□□□□□ -0.65
HDAC4-205ENST00000454542 LGALS1P09382 135 aaKnown RBP10.98□□□□□ -0.65
HDAC4-205ENST00000454542 HLA-GP17693 338 aa10.98□□□□□ -0.65
HDAC4-205ENST00000454542 S100GP29377 79 aa10.98□□□□□ -0.65
HDAC4-205ENST00000454542 S100A5P33763 92 aa10.98□□□□□ -0.65
HDAC4-205ENST00000454542 ECI1P42126 302 aa10.98□□□□□ -0.65
HDAC4-205ENST00000454542 RPL27AP46776 148 aaKnown RBP10.98□□□□□ -0.65
HDAC4-205ENST00000454542 PPP5CP53041 499 aa10.98□□□□□ -0.65
HDAC4-205ENST00000454542 SURF2Q15527 256 aaPredicted RBP10.98□□□□□ -0.65
HDAC4-205ENST00000454542 KLK9Q2XQG4 91 aa10.98□□□□□ -0.65
HDAC4-205ENST00000454542 OR6Q1Q8NGQ2 317 aa10.98□□□□□ -0.65
HDAC4-205ENST00000454542 OR13C8Q8NGS7 320 aa10.98□□□□□ -0.65
HDAC4-205ENST00000454542 RCC1LQ96I51 464 aaKnown RBP10.98□□□□□ -0.65
HDAC4-205ENST00000454542 SPIN2AQ99865 258 aa10.98□□□□□ -0.65
HDAC4-205ENST00000454542 SPIN2BQ9BPZ2 258 aa10.98□□□□□ -0.65
HDAC4-205ENST00000454542 KLK9Q9UKQ9 250 aa10.98□□□□□ -0.65
HDAC4-205ENST00000454542 TRAV3A0A0B4J244 114 aa10.97□□□□□ -0.65
HDAC4-205ENST00000454542 H0Y980 276 aa10.97□□□□□ -0.65
HDAC4-205ENST00000454542 ACTL6BO94805 426 aa10.97□□□□□ -0.65
HDAC4-205ENST00000454542 IGKV1-39P01597 117 aa10.97□□□□□ -0.65
HDAC4-205ENST00000454542 IGKV1D-39P04432 117 aa10.97□□□□□ -0.65
HDAC4-205ENST00000454542 CTSDP07339 412 aaPredicted RBP10.97□□□□□ -0.65
HDAC4-205ENST00000454542 OR9G9P0C7N8 305 aa10.97□□□□□ -0.65
HDAC4-205ENST00000454542 PGAM2P15259 253 aa10.97□□□□□ -0.65
HDAC4-205ENST00000454542 CD33P20138 364 aa10.97□□□□□ -0.65
HDAC4-205ENST00000454542 TPPP2P59282 170 aa10.97□□□□□ -0.65
HDAC4-205ENST00000454542 KLF9Q13886 244 aaPredicted RBP10.97□□□□□ -0.65
HDAC4-205ENST00000454542 TTC9CQ8N5M4 171 aa10.97□□□□□ -0.65
HDAC4-205ENST00000454542 DUX3Q96PT4 197 aa10.97□□□□□ -0.65
HDAC4-205ENST00000454542 TRBV9A0A0B4J1U6 114 aa10.96□□□□□ -0.65
HDAC4-205ENST00000454542 NPIPB5A8MRT5 1133 aa10.96□□□□□ -0.65
HDAC4-205ENST00000454542 DISC1C4P0D8 188 aa10.96□□□□□ -0.65
HDAC4-205ENST00000454542 MPPED1O15442 326 aa10.96□□□□□ -0.65
HDAC4-205ENST00000454542 WIPF1O43516 503 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms