RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 CREBL2O60519 120 aaPredicted RBP21.91■■□□□ 1.1
SMARCC1-203ENST00000454240 KBTBD11O94819 623 aa21.91■■□□□ 1.1
SMARCC1-203ENST00000454240 CTSDP07339 412 aaPredicted RBP21.91■■□□□ 1.1
SMARCC1-203ENST00000454240 ELANEP08246 267 aa21.91■■□□□ 1.1
SMARCC1-203ENST00000454240 LPAR6P43657 344 aa21.91■■□□□ 1.1
SMARCC1-203ENST00000454240 BAK1Q16611 211 aa21.91■■□□□ 1.1
SMARCC1-203ENST00000454240 NSUN5P1Q3KNT7 163 aa21.91■■□□□ 1.1
SMARCC1-203ENST00000454240 MMD2Q8IY49 270 aa21.91■■□□□ 1.1
SMARCC1-203ENST00000454240 MCUBQ9NWR8 336 aa21.91■■□□□ 1.1
SMARCC1-203ENST00000454240 BET1LQ9NYM9 111 aa21.91■■□□□ 1.1
SMARCC1-203ENST00000454240 IGLV1-40P01703 118 aa21.9■■□□□ 1.1
SMARCC1-203ENST00000454240 PSMB8P28062 276 aa21.9■■□□□ 1.1
SMARCC1-203ENST00000454240 FAUP35544 74 aaKnown RBP21.9■■□□□ 1.1
SMARCC1-203ENST00000454240 ECSCRQ19T08 205 aa21.9■■□□□ 1.1
SMARCC1-203ENST00000454240 OR4A47Q6IF82 309 aa21.9■■□□□ 1.1
SMARCC1-203ENST00000454240 SSX9Q7RTT3 188 aa21.9■■□□□ 1.1
SMARCC1-203ENST00000454240 LFNGQ8NES3 379 aa21.9■■□□□ 1.1
SMARCC1-203ENST00000454240 GRPEL2Q8TAA5 225 aa21.9■■□□□ 1.1
SMARCC1-203ENST00000454240 GPR132Q9UNW8 380 aa21.9■■□□□ 1.1
SMARCC1-203ENST00000454240 IL6RP08887 468 aaPredicted RBP21.89■■□□□ 1.09
SMARCC1-203ENST00000454240 TNXAQ16473 311 aa21.89■■□□□ 1.09
SMARCC1-203ENST00000454240 RTBDNQ9BSG5 229 aaPredicted RBP21.89■■□□□ 1.09
SMARCC1-203ENST00000454240 ZFP57Q9NU63 452 aa21.89■■□□□ 1.09
SMARCC1-203ENST00000454240 TSPAN15O95858 294 aa21.88■■□□□ 1.09
SMARCC1-203ENST00000454240 CXorf66Q5JRM2 361 aaPredicted RBP21.88■■□□□ 1.09
SMARCC1-203ENST00000454240 UNQ5815/PRO19632Q6UWF5 114 aa21.88■■□□□ 1.09
SMARCC1-203ENST00000454240 CCDC71LQ8N9Z2 235 aa21.88■■□□□ 1.09
SMARCC1-203ENST00000454240 OR4A5Q8NH83 315 aa21.88■■□□□ 1.09
SMARCC1-203ENST00000454240 R3HDM4Q96D70 268 aa21.88■■□□□ 1.09
SMARCC1-203ENST00000454240 C5orf66Q9H5L9 145 aa21.88■■□□□ 1.09
SMARCC1-203ENST00000454240 AKIP1Q9NQ31 210 aa21.88■■□□□ 1.09
SMARCC1-203ENST00000454240 PTTG2Q9NZH5 202 aa21.88■■□□□ 1.09
SMARCC1-203ENST00000454240 COPZ2Q9P299 210 aa21.88■■□□□ 1.09
SMARCC1-203ENST00000454240 SOX15O60248 233 aa21.87■■□□□ 1.09
SMARCC1-203ENST00000454240 RPLP1P05386 114 aaKnown RBP21.87■■□□□ 1.09
SMARCC1-203ENST00000454240 CADM3Q8N126 398 aa21.87■■□□□ 1.09
SMARCC1-203ENST00000454240 SRSF12Q8WXF0 261 aaKnown RBP21.87■■□□□ 1.09
SMARCC1-203ENST00000454240 C14orf166Q9Y224 244 aaKnown RBP21.87■■□□□ 1.09
SMARCC1-203ENST00000454240 FOXA2Q9Y261 457 aaPredicted RBP21.87■■□□□ 1.09
SMARCC1-203ENST00000454240 VWFP04275 2813 aa21.87■■□□□ 1.09
SMARCC1-203ENST00000454240 WNK1Q9H4A3 2382 aa21.87■■□□□ 1.09
SMARCC1-203ENST00000454240 CMYA5Q8N3K9 4069 aa21.86■■□□□ 1.09
SMARCC1-203ENST00000454240 A0A1W2PN81 502 aa21.86■■□□□ 1.09
SMARCC1-203ENST00000454240 A0A1W2PRX2 142 aa21.86■■□□□ 1.09
SMARCC1-203ENST00000454240 MARCH11A6NNE9 402 aa21.86■■□□□ 1.09
SMARCC1-203ENST00000454240 ACTL6BO94805 426 aa21.86■■□□□ 1.09
SMARCC1-203ENST00000454240 MAS1LP35410 378 aa21.86■■□□□ 1.09
SMARCC1-203ENST00000454240 CHRNA7P36544 502 aa21.86■■□□□ 1.09
SMARCC1-203ENST00000454240 RPL23AP62750 156 aaKnown RBP21.86■■□□□ 1.09
SMARCC1-203ENST00000454240 KHDC1LQ5JSQ8 128 aa21.86■■□□□ 1.09
SMARCC1-203ENST00000454240 ASPHD1Q5U4P2 390 aa21.86■■□□□ 1.09
SMARCC1-203ENST00000454240 TRIQKQ629K1 86 aa21.86■■□□□ 1.09
SMARCC1-203ENST00000454240 ZNF57Q68EA5 555 aaPredicted RBP21.86■■□□□ 1.09
SMARCC1-203ENST00000454240 LCNL1Q6ZST4 164 aa21.86■■□□□ 1.09
SMARCC1-203ENST00000454240 DMBX1Q8NFW5 382 aa21.86■■□□□ 1.09
SMARCC1-203ENST00000454240 TMEM68Q96MH6 324 aa21.86■■□□□ 1.09
SMARCC1-203ENST00000454240 TMEM140Q9NV12 185 aa21.86■■□□□ 1.09
SMARCC1-203ENST00000454240 PKD1L1Q8TDX9 2849 aa21.86■■□□□ 1.09
SMARCC1-203ENST00000454240 MSGN1A6NI15 193 aa21.85■■□□□ 1.09
SMARCC1-203ENST00000454240 H0Y980 276 aa21.85■■□□□ 1.09
SMARCC1-203ENST00000454240 UPK2O00526 184 aa21.85■■□□□ 1.09
SMARCC1-203ENST00000454240 OR5M8Q8NGP6 311 aa21.85■■□□□ 1.09
SMARCC1-203ENST00000454240 MYOZ3Q8TDC0 251 aa21.85■■□□□ 1.09
SMARCC1-203ENST00000454240 SCGB3A2Q96PL1 93 aa21.85■■□□□ 1.09
SMARCC1-203ENST00000454240 TP53RKQ96S44 253 aa21.85■■□□□ 1.09
SMARCC1-203ENST00000454240 KLK15Q9H2R5 256 aa21.85■■□□□ 1.09
SMARCC1-203ENST00000454240 C3orf85A0A1B0GTC6 90 aa21.84■■□□□ 1.09
SMARCC1-203ENST00000454240 KRASP01116 189 aa21.84■■□□□ 1.09
SMARCC1-203ENST00000454240 IGKV1-39P01597 117 aa21.84■■□□□ 1.09
SMARCC1-203ENST00000454240 IGKV1D-39P04432 117 aa21.84■■□□□ 1.09
SMARCC1-203ENST00000454240 ERVK-16P61578 105 aa21.84■■□□□ 1.09
SMARCC1-203ENST00000454240 RPL8P62917 257 aaKnown RBP21.84■■□□□ 1.09
SMARCC1-203ENST00000454240 TRAV3A0A0B4J244 114 aa21.83■■□□□ 1.09
SMARCC1-203ENST00000454240 FGF2P09038 288 aa21.83■■□□□ 1.09
SMARCC1-203ENST00000454240 IL7P13232 177 aa21.83■■□□□ 1.09
SMARCC1-203ENST00000454240 RPA2P15927 270 aa21.83■■□□□ 1.09
SMARCC1-203ENST00000454240 G6PCP35575 357 aa21.83■■□□□ 1.09
SMARCC1-203ENST00000454240 RAB9AP51151 201 aa21.83■■□□□ 1.09
SMARCC1-203ENST00000454240 KIAA0141Q14154 515 aaPredicted RBP21.83■■□□□ 1.09
SMARCC1-203ENST00000454240 C10orf55Q5SWW7 151 aa21.83■■□□□ 1.09
SMARCC1-203ENST00000454240 TREML4Q6UXN2 200 aa21.83■■□□□ 1.09
SMARCC1-203ENST00000454240 VSIG4Q9Y279 399 aa21.83■■□□□ 1.09
SMARCC1-203ENST00000454240 B3GALNT1O75752 331 aa21.82■■□□□ 1.08
SMARCC1-203ENST00000454240 SERPINE2P07093 398 aa21.82■■□□□ 1.08
SMARCC1-203ENST00000454240 PF4V1P10720 104 aa21.82■■□□□ 1.08
SMARCC1-203ENST00000454240 HLA-GP17693 338 aa21.82■■□□□ 1.08
SMARCC1-203ENST00000454240 CDX1P47902 265 aaPredicted RBP21.82■■□□□ 1.08
SMARCC1-203ENST00000454240 INPP1P49441 399 aa21.82■■□□□ 1.08
SMARCC1-203ENST00000454240 TMEM65Q6PI78 240 aa21.82■■□□□ 1.08
SMARCC1-203ENST00000454240 C18orf65Q6ZTR6 163 aa21.82■■□□□ 1.08
SMARCC1-203ENST00000454240 OR4F17Q8NGA8 305 aa21.82■■□□□ 1.08
SMARCC1-203ENST00000454240 SEC22AQ96IW7 307 aa21.82■■□□□ 1.08
SMARCC1-203ENST00000454240 OR4F4Q96R69 305 aa21.82■■□□□ 1.08
SMARCC1-203ENST00000454240 PHB2Q99623 299 aa21.82■■□□□ 1.08
SMARCC1-203ENST00000454240 SPIN2AQ99865 258 aa21.82■■□□□ 1.08
SMARCC1-203ENST00000454240 SPIN2BQ9BPZ2 258 aa21.82■■□□□ 1.08
SMARCC1-203ENST00000454240 E7EUB6 86 aa21.81■■□□□ 1.08
SMARCC1-203ENST00000454240 RPL27AP46776 148 aaKnown RBP21.81■■□□□ 1.08
SMARCC1-203ENST00000454240 OR5T1Q8NG75 326 aa21.81■■□□□ 1.08
SMARCC1-203ENST00000454240 FAM110DQ8TAY7 271 aaPredicted RBP21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms