RNA–Protein interactions for RNA: ENST00000448301.6

CTSS-202, Transcript of cathepsin S, humanhuman

TSL 2 BASIC

Gene CTSS, Length 1,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSS-202ENST00000448301 ATRQ13535 2644 aa11.09□□□□□ -0.63
CTSS-202ENST00000448301 ATG12O94817 140 aa11.09□□□□□ -0.63
CTSS-202ENST00000448301 CDS2O95674 445 aa11.09□□□□□ -0.63
CTSS-202ENST00000448301 KRASP01116 189 aa11.09□□□□□ -0.63
CTSS-202ENST00000448301 IL6RP08887 468 aaPredicted RBP11.09□□□□□ -0.63
CTSS-202ENST00000448301 TMEM187Q14656 261 aa11.09□□□□□ -0.63
CTSS-202ENST00000448301 PRSS8Q16651 343 aa11.09□□□□□ -0.63
CTSS-202ENST00000448301 TRIM16LQ309B1 348 aa11.09□□□□□ -0.63
CTSS-202ENST00000448301 TMEM95Q3KNT9 176 aa11.09□□□□□ -0.63
CTSS-202ENST00000448301 ZNF562Q6V9R5 426 aa11.09□□□□□ -0.63
CTSS-202ENST00000448301 FOXRED2Q8IWF2 684 aa11.09□□□□□ -0.63
CTSS-202ENST00000448301 MMD2Q8IY49 270 aa11.09□□□□□ -0.63
CTSS-202ENST00000448301 DUSP18Q8NEJ0 188 aa11.09□□□□□ -0.63
CTSS-202ENST00000448301 SEC22AQ96IW7 307 aa11.09□□□□□ -0.63
CTSS-202ENST00000448301 TMEM56Q96MV1 263 aa11.09□□□□□ -0.63
CTSS-202ENST00000448301 CLCC1Q96S66 551 aa11.09□□□□□ -0.63
CTSS-202ENST00000448301 OR51J1Q9H342 316 aa11.09□□□□□ -0.63
CTSS-202ENST00000448301 NUDT15Q9NV35 164 aa11.09□□□□□ -0.63
CTSS-202ENST00000448301 RNF114Q9Y508 228 aa11.09□□□□□ -0.63
CTSS-202ENST00000448301 NUBP2Q9Y5Y2 271 aa11.09□□□□□ -0.63
CTSS-202ENST00000448301 TMEM56-RWDD3S4R434 201 aa11.09□□□□□ -0.63
CTSS-202ENST00000448301 PLXNB1O43157 2135 aa11.08□□□□□ -0.64
CTSS-202ENST00000448301 AP4M1O00189 453 aa11.08□□□□□ -0.64
CTSS-202ENST00000448301 SFT2D2O95562 160 aa11.08□□□□□ -0.64
CTSS-202ENST00000448301 IGF1P05019 195 aa11.08□□□□□ -0.64
CTSS-202ENST00000448301 FGF2P09038 288 aa11.08□□□□□ -0.64
CTSS-202ENST00000448301 G6PCP35575 357 aa11.08□□□□□ -0.64
CTSS-202ENST00000448301 MECP2P51608 486 aaKnown RBP11.08□□□□□ -0.64
CTSS-202ENST00000448301 PROK1P58294 105 aa11.08□□□□□ -0.64
CTSS-202ENST00000448301 CX3CL1P78423 397 aa11.08□□□□□ -0.64
CTSS-202ENST00000448301 SSBP2P81877 361 aaPredicted RBP11.08□□□□□ -0.64
CTSS-202ENST00000448301 NDPQ00604 133 aa11.08□□□□□ -0.64
CTSS-202ENST00000448301 PJVKQ0ZLH3 352 aa11.08□□□□□ -0.64
CTSS-202ENST00000448301 PPP1R1AQ13522 171 aa11.08□□□□□ -0.64
CTSS-202ENST00000448301 AWAT1Q58HT5 328 aa11.08□□□□□ -0.64
CTSS-202ENST00000448301 NRARPQ7Z6K4 114 aa11.08□□□□□ -0.64
CTSS-202ENST00000448301 LHFPL5Q8TAF8 219 aa11.08□□□□□ -0.64
CTSS-202ENST00000448301 RBPMSQ93062 196 aaKnown RBP11.08□□□□□ -0.64
CTSS-202ENST00000448301 IL22RA2Q969J5 263 aa11.08□□□□□ -0.64
CTSS-202ENST00000448301 WNT10AQ9GZT5 417 aa11.08□□□□□ -0.64
CTSS-202ENST00000448301 ALX4Q9H161 411 aaPredicted RBP11.08□□□□□ -0.64
CTSS-202ENST00000448301 ZNF430Q9H8G1 570 aaPredicted RBP11.08□□□□□ -0.64
CTSS-202ENST00000448301 TRAV6A0A075B6T7 132 aa11.07□□□□□ -0.64
CTSS-202ENST00000448301 LINC01548A6NM66 108 aa11.07□□□□□ -0.64
CTSS-202ENST00000448301 UPK2O00526 184 aa11.07□□□□□ -0.64
CTSS-202ENST00000448301 H2AFB2P0C5Z0 115 aa11.07□□□□□ -0.64
CTSS-202ENST00000448301 OR4E1P0C645 316 aa11.07□□□□□ -0.64
CTSS-202ENST00000448301 ANXA7P20073 488 aaKnown RBP11.07□□□□□ -0.64
CTSS-202ENST00000448301 VAMP1P23763 118 aa11.07□□□□□ -0.64
CTSS-202ENST00000448301 MAS1LP35410 378 aa11.07□□□□□ -0.64
CTSS-202ENST00000448301 CRIP2P52943 208 aaPredicted RBP11.07□□□□□ -0.64
CTSS-202ENST00000448301 SRPXP78539 464 aa11.07□□□□□ -0.64
CTSS-202ENST00000448301 ZNF695Q8IW36 515 aa11.07□□□□□ -0.64
CTSS-202ENST00000448301 SELENOHQ8IZQ5 122 aaKnown RBP11.07□□□□□ -0.64
CTSS-202ENST00000448301 TNCP24821 2201 aa11.06□□□□□ -0.64
CTSS-202ENST00000448301 PIGBOS1A0A0B4J2F0 54 aa11.06□□□□□ -0.64
CTSS-202ENST00000448301 C9orf170A2RU37 121 aa11.06□□□□□ -0.64
CTSS-202ENST00000448301 ATP6V0E1O15342 81 aa11.06□□□□□ -0.64
CTSS-202ENST00000448301 ACTL6BO94805 426 aa11.06□□□□□ -0.64
CTSS-202ENST00000448301 IGKV1-5P01602 117 aa11.06□□□□□ -0.64
CTSS-202ENST00000448301 HLA-AP01891 365 aaKnown RBP11.06□□□□□ -0.64
CTSS-202ENST00000448301 AKR1C2P52895 323 aa11.06□□□□□ -0.64
CTSS-202ENST00000448301 GNB1P62873 340 aa11.06□□□□□ -0.64
CTSS-202ENST00000448301 RPL8P62917 257 aaKnown RBP11.06□□□□□ -0.64
CTSS-202ENST00000448301 DCTN2Q13561 401 aaKnown RBP11.06□□□□□ -0.64
CTSS-202ENST00000448301 FXYD3Q14802 87 aa11.06□□□□□ -0.64
CTSS-202ENST00000448301 TNXAQ16473 311 aa11.06□□□□□ -0.64
CTSS-202ENST00000448301 TMEM268Q5VZI3 342 aa11.06□□□□□ -0.64
CTSS-202ENST00000448301 H2BFWTQ7Z2G1 175 aa11.06□□□□□ -0.64
CTSS-202ENST00000448301 LGI3Q8N145 548 aa11.06□□□□□ -0.64
CTSS-202ENST00000448301 STPG2Q8N412 459 aa11.06□□□□□ -0.64
CTSS-202ENST00000448301 CHPT1Q8WUD6 406 aa11.06□□□□□ -0.64
CTSS-202ENST00000448301 ARPC1AQ92747 370 aa11.06□□□□□ -0.64
CTSS-202ENST00000448301 PARP11Q9NR21 331 aa11.06□□□□□ -0.64
CTSS-202ENST00000448301 FBXO7Q9Y3I1 522 aa11.06□□□□□ -0.64
CTSS-202ENST00000448301 TET2Q6N021 2002 aaPredicted RBP11.06□□□□□ -0.64
CTSS-202ENST00000448301 TRAV3A0A0B4J244 114 aa11.05□□□□□ -0.64
CTSS-202ENST00000448301 CNIH1O95406 144 aa11.05□□□□□ -0.64
CTSS-202ENST00000448301 PTTG1O95997 202 aa11.05□□□□□ -0.64
CTSS-202ENST00000448301 OR9G9P0C7N8 305 aa11.05□□□□□ -0.64
CTSS-202ENST00000448301 P0C879 139 aa11.05□□□□□ -0.64
CTSS-202ENST00000448301 HLA-GP17693 338 aa11.05□□□□□ -0.64
CTSS-202ENST00000448301 DHRS2Q13268 280 aa11.05□□□□□ -0.64
CTSS-202ENST00000448301 C4orf46Q504U0 113 aa11.05□□□□□ -0.64
CTSS-202ENST00000448301 LYG2Q86SG7 212 aa11.05□□□□□ -0.64
CTSS-202ENST00000448301 FAM219AQ8IW50 185 aa11.05□□□□□ -0.64
CTSS-202ENST00000448301 KLHDC1Q8N7A1 406 aa11.05□□□□□ -0.64
CTSS-202ENST00000448301 LRTM2Q8N967 370 aa11.05□□□□□ -0.64
CTSS-202ENST00000448301 SGMS2Q8NHU3 365 aa11.05□□□□□ -0.64
CTSS-202ENST00000448301 RRNAD1Q96FB5 475 aaKnown RBP11.05□□□□□ -0.64
CTSS-202ENST00000448301 NOL4LQ96MY1 436 aaPredicted RBP11.05□□□□□ -0.64
CTSS-202ENST00000448301 MDFIQ99750 246 aa11.05□□□□□ -0.64
CTSS-202ENST00000448301 GON7Q9BXV9 100 aa11.05□□□□□ -0.64
CTSS-202ENST00000448301 PRR13Q9NZ81 148 aa11.05□□□□□ -0.64
CTSS-202ENST00000448301 A0A0B4J2A0 478 aa11.04□□□□□ -0.64
CTSS-202ENST00000448301 DUXBA0A1W2PPF3 345 aa11.04□□□□□ -0.64
CTSS-202ENST00000448301 SNAPC5O75971 98 aa11.04□□□□□ -0.64
CTSS-202ENST00000448301 EGR2P11161 476 aaPredicted RBP11.04□□□□□ -0.64
CTSS-202ENST00000448301 ANKRD55Q3KP44 614 aa11.04□□□□□ -0.64
CTSS-202ENST00000448301 PLET1Q6UQ28 207 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms