RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-210ENST00000442216 RAB9AP51151 201 aa11.74□□□□□ -0.53
CSNK1E-210ENST00000442216 GNB1P62873 340 aa11.74□□□□□ -0.53
CSNK1E-210ENST00000442216 TNXAQ16473 311 aa11.74□□□□□ -0.53
CSNK1E-210ENST00000442216 FOXB2Q5VYV0 432 aa11.74□□□□□ -0.53
CSNK1E-210ENST00000442216 OR6Q1Q8NGQ2 317 aa11.74□□□□□ -0.53
CSNK1E-210ENST00000442216 GRPEL2Q8TAA5 225 aa11.74□□□□□ -0.53
CSNK1E-210ENST00000442216 SRSF12Q8WXF0 261 aaKnown RBP11.74□□□□□ -0.53
CSNK1E-210ENST00000442216 DEDD2Q8WXF8 326 aa11.74□□□□□ -0.53
CSNK1E-210ENST00000442216 UBE2E2Q96LR5 201 aa11.74□□□□□ -0.53
CSNK1E-210ENST00000442216 PRRT1Q99946 306 aa11.74□□□□□ -0.53
CSNK1E-210ENST00000442216 SLA2Q9H6Q3 261 aa11.74□□□□□ -0.53
CSNK1E-210ENST00000442216 SLC2A9Q9NRM0 540 aa11.74□□□□□ -0.53
CSNK1E-210ENST00000442216 NUDT19A8MXV4 375 aa11.73□□□□□ -0.53
CSNK1E-210ENST00000442216 SOX15O60248 233 aa11.73□□□□□ -0.53
CSNK1E-210ENST00000442216 IL6RP08887 468 aaPredicted RBP11.73□□□□□ -0.53
CSNK1E-210ENST00000442216 PGAM2P15259 253 aa11.73□□□□□ -0.53
CSNK1E-210ENST00000442216 KIAA0141Q14154 515 aaPredicted RBP11.73□□□□□ -0.53
CSNK1E-210ENST00000442216 SURF2Q15527 256 aaPredicted RBP11.73□□□□□ -0.53
CSNK1E-210ENST00000442216 ZNF79Q15937 498 aa11.73□□□□□ -0.53
CSNK1E-210ENST00000442216 SCGB2B2Q4G0G5 96 aa11.73□□□□□ -0.53
CSNK1E-210ENST00000442216 PHLDA2Q53GA4 152 aa11.73□□□□□ -0.53
CSNK1E-210ENST00000442216 PYDC2Q56P42 97 aa11.73□□□□□ -0.53
CSNK1E-210ENST00000442216 OR4A47Q6IF82 309 aa11.73□□□□□ -0.53
CSNK1E-210ENST00000442216 TBC1D26Q86UD7 250 aa11.73□□□□□ -0.53
CSNK1E-210ENST00000442216 VKORC1L1Q8N0U8 176 aa11.73□□□□□ -0.53
CSNK1E-210ENST00000442216 Q8N402 240 aa11.73□□□□□ -0.53
CSNK1E-210ENST00000442216 ZNF491Q8N8L2 437 aa11.73□□□□□ -0.53
CSNK1E-210ENST00000442216 KLHL30-AS1Q8NEE0 82 aa11.73□□□□□ -0.53
CSNK1E-210ENST00000442216 OR4C16Q8NGL9 310 aa11.73□□□□□ -0.53
CSNK1E-210ENST00000442216 PKD1L1Q8TDX9 2849 aa11.73□□□□□ -0.53
CSNK1E-210ENST00000442216 SPIN2AQ99865 258 aa11.73□□□□□ -0.53
CSNK1E-210ENST00000442216 SPIN2BQ9BPZ2 258 aa11.73□□□□□ -0.53
CSNK1E-210ENST00000442216 SLC2A8Q9NY64 477 aa11.73□□□□□ -0.53
CSNK1E-210ENST00000442216 MPPED1O15442 326 aa11.72□□□□□ -0.53
CSNK1E-210ENST00000442216 S1PR2O95136 353 aa11.72□□□□□ -0.53
CSNK1E-210ENST00000442216 PF4P02776 101 aa11.72□□□□□ -0.53
CSNK1E-210ENST00000442216 MYCNOSP40205 109 aa11.72□□□□□ -0.53
CSNK1E-210ENST00000442216 LPAR6P43657 344 aa11.72□□□□□ -0.53
CSNK1E-210ENST00000442216 AP3S2P59780 193 aa11.72□□□□□ -0.53
CSNK1E-210ENST00000442216 ERVK-16P61578 105 aa11.72□□□□□ -0.53
CSNK1E-210ENST00000442216 RPL8P62917 257 aaKnown RBP11.72□□□□□ -0.53
CSNK1E-210ENST00000442216 RUNX1Q01196 453 aa11.72□□□□□ -0.53
CSNK1E-210ENST00000442216 ZNF585BQ52M93 769 aa11.72□□□□□ -0.53
CSNK1E-210ENST00000442216 LCNL1Q6ZST4 164 aa11.72□□□□□ -0.53
CSNK1E-210ENST00000442216 SSX9Q7RTT3 188 aa11.72□□□□□ -0.53
CSNK1E-210ENST00000442216 CCDC71LQ8N9Z2 235 aa11.72□□□□□ -0.53
CSNK1E-210ENST00000442216 WFDC9Q8NEX5 89 aa11.72□□□□□ -0.53
CSNK1E-210ENST00000442216 C4orf3Q8WVX3 66 aa11.72□□□□□ -0.53
CSNK1E-210ENST00000442216 TRIM63Q969Q1 353 aa11.72□□□□□ -0.53
CSNK1E-210ENST00000442216 PHB2Q99623 299 aa11.72□□□□□ -0.53
CSNK1E-210ENST00000442216 KLK15Q9H2R5 256 aa11.72□□□□□ -0.53
CSNK1E-210ENST00000442216 SCP2D1Q9UJQ7 156 aa11.72□□□□□ -0.53
CSNK1E-210ENST00000442216 VSIG4Q9Y279 399 aa11.72□□□□□ -0.53
CSNK1E-210ENST00000442216 MGAM2Q2M2H8 2515 aa11.71□□□□□ -0.53
CSNK1E-210ENST00000442216 VWFP04275 2813 aa11.71□□□□□ -0.53
CSNK1E-210ENST00000442216 MSGN1A6NI15 193 aa11.71□□□□□ -0.53
CSNK1E-210ENST00000442216 MARCH11A6NNE9 402 aa11.71□□□□□ -0.53
CSNK1E-210ENST00000442216 B3GALNT1O75752 331 aa11.71□□□□□ -0.53
CSNK1E-210ENST00000442216 CTSDP07339 412 aaPredicted RBP11.71□□□□□ -0.53
CSNK1E-210ENST00000442216 RPA2P15927 270 aa11.71□□□□□ -0.53
CSNK1E-210ENST00000442216 FAUP35544 74 aaKnown RBP11.71□□□□□ -0.53
CSNK1E-210ENST00000442216 PPP5CP53041 499 aa11.71□□□□□ -0.53
CSNK1E-210ENST00000442216 PIGPP57054 158 aa11.71□□□□□ -0.53
CSNK1E-210ENST00000442216 ASPHD1Q5U4P2 390 aa11.71□□□□□ -0.53
CSNK1E-210ENST00000442216 FAAP20Q6NZ36 180 aa11.71□□□□□ -0.53
CSNK1E-210ENST00000442216 C8orf86Q6ZUL3 223 aa11.71□□□□□ -0.53
CSNK1E-210ENST00000442216 DMBX1Q8NFW5 382 aa11.71□□□□□ -0.53
CSNK1E-210ENST00000442216 HRASLSQ9HDD0 168 aa11.71□□□□□ -0.53
CSNK1E-210ENST00000442216 TMEM140Q9NV12 185 aa11.71□□□□□ -0.53
CSNK1E-210ENST00000442216 TRRAPQ9Y4A5 3859 aa11.7□□□□□ -0.54
CSNK1E-210ENST00000442216 UPK2O00526 184 aa11.7□□□□□ -0.54
CSNK1E-210ENST00000442216 RPL27AP46776 148 aaKnown RBP11.7□□□□□ -0.54
CSNK1E-210ENST00000442216 KLF9Q13886 244 aaPredicted RBP11.7□□□□□ -0.54
CSNK1E-210ENST00000442216 ETV3LQ6ZN32 361 aa11.7□□□□□ -0.54
CSNK1E-210ENST00000442216 C18orf65Q6ZTR6 163 aa11.7□□□□□ -0.54
CSNK1E-210ENST00000442216 SLC25A42Q86VD7 318 aa11.7□□□□□ -0.54
CSNK1E-210ENST00000442216 TOMM5Q8N4H5 51 aa11.7□□□□□ -0.54
CSNK1E-210ENST00000442216 GDPD1Q8N9F7 314 aa11.7□□□□□ -0.54
CSNK1E-210ENST00000442216 OR51S1Q8NGJ8 323 aa11.7□□□□□ -0.54
CSNK1E-210ENST00000442216 OR13C8Q8NGS7 320 aa11.7□□□□□ -0.54
CSNK1E-210ENST00000442216 MARCH1Q8TCQ1 289 aa11.7□□□□□ -0.54
CSNK1E-210ENST00000442216 MRGPRFQ96AM1 343 aa11.7□□□□□ -0.54
CSNK1E-210ENST00000442216 SCGB3A2Q96PL1 93 aa11.7□□□□□ -0.54
CSNK1E-210ENST00000442216 P2RX4Q99571 388 aa11.7□□□□□ -0.54
CSNK1E-210ENST00000442216 SRRQ9GZT4 340 aa11.7□□□□□ -0.54
CSNK1E-210ENST00000442216 COPZ2Q9P299 210 aa11.7□□□□□ -0.54
CSNK1E-210ENST00000442216 GPR132Q9UNW8 380 aa11.7□□□□□ -0.54
CSNK1E-210ENST00000442216 C14orf166Q9Y224 244 aaKnown RBP11.7□□□□□ -0.54
CSNK1E-210ENST00000442216 FBN3Q75N90 2809 aa11.7□□□□□ -0.54
CSNK1E-210ENST00000442216 A6NHS1 94 aa11.69□□□□□ -0.54
CSNK1E-210ENST00000442216 H0Y980 276 aa11.69□□□□□ -0.54
CSNK1E-210ENST00000442216 I3L521 148 aa11.69□□□□□ -0.54
CSNK1E-210ENST00000442216 OR9G9P0C7N8 305 aa11.69□□□□□ -0.54
CSNK1E-210ENST00000442216 HLA-GP17693 338 aa11.69□□□□□ -0.54
CSNK1E-210ENST00000442216 CD33P20138 364 aa11.69□□□□□ -0.54
CSNK1E-210ENST00000442216 THOC7Q6I9Y2 204 aaKnown RBP11.69□□□□□ -0.54
CSNK1E-210ENST00000442216 LINC00299Q6ZSB3 139 aa11.69□□□□□ -0.54
CSNK1E-210ENST00000442216 TTC9CQ8N5M4 171 aa11.69□□□□□ -0.54
CSNK1E-210ENST00000442216 OR5T1Q8NG75 326 aa11.69□□□□□ -0.54
CSNK1E-210ENST00000442216 A0A0G2JLM5 398 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms