RNA–Protein interactions for RNA: ENST00000438552.6

SNRPB-202, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SNRPB, Length 1,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-202ENST00000438552 RTBDNQ9BSG5 229 aaPredicted RBP12.68□□□□□ -0.38
SNRPB-202ENST00000438552 CCDC32Q9BV29 185 aa12.68□□□□□ -0.38
SNRPB-202ENST00000438552 C5orf66Q9H5L9 145 aa12.68□□□□□ -0.38
SNRPB-202ENST00000438552 ZNF580Q9UK33 172 aa12.68□□□□□ -0.38
SNRPB-202ENST00000438552 GPR132Q9UNW8 380 aa12.68□□□□□ -0.38
SNRPB-202ENST00000438552 A0A1W2PRX2 142 aa12.67□□□□□ -0.38
SNRPB-202ENST00000438552 MARCH11A6NNE9 402 aa12.67□□□□□ -0.38
SNRPB-202ENST00000438552 H0Y980 276 aa12.67□□□□□ -0.38
SNRPB-202ENST00000438552 NQO2P16083 231 aa12.67□□□□□ -0.38
SNRPB-202ENST00000438552 ERVK-16P61578 105 aa12.67□□□□□ -0.38
SNRPB-202ENST00000438552 POU2AF1Q16633 256 aa12.67□□□□□ -0.38
SNRPB-202ENST00000438552 C19orf54Q5BKX5 351 aa12.67□□□□□ -0.38
SNRPB-202ENST00000438552 KHDC1LQ5JSQ8 128 aa12.67□□□□□ -0.38
SNRPB-202ENST00000438552 LCNL1Q6ZST4 164 aa12.67□□□□□ -0.38
SNRPB-202ENST00000438552 MMD2Q8IY49 270 aa12.67□□□□□ -0.38
SNRPB-202ENST00000438552 DMBX1Q8NFW5 382 aa12.67□□□□□ -0.38
SNRPB-202ENST00000438552 SGMS2Q8NHU3 365 aa12.67□□□□□ -0.38
SNRPB-202ENST00000438552 TMEM167AQ8TBQ9 72 aa12.67□□□□□ -0.38
SNRPB-202ENST00000438552 GON7Q9BXV9 100 aa12.67□□□□□ -0.38
SNRPB-202ENST00000438552 PALMDQ9NP74 551 aa12.67□□□□□ -0.38
SNRPB-202ENST00000438552 TMEM140Q9NV12 185 aa12.67□□□□□ -0.38
SNRPB-202ENST00000438552 C3orf85A0A1B0GTC6 90 aa12.66□□□□□ -0.38
SNRPB-202ENST00000438552 CREBL2O60519 120 aaPredicted RBP12.66□□□□□ -0.38
SNRPB-202ENST00000438552 IGKV1-39P01597 117 aa12.66□□□□□ -0.38
SNRPB-202ENST00000438552 IGKV1D-39P04432 117 aa12.66□□□□□ -0.38
SNRPB-202ENST00000438552 G6PCP35575 357 aa12.66□□□□□ -0.38
SNRPB-202ENST00000438552 DCTN2Q13561 401 aaKnown RBP12.66□□□□□ -0.38
SNRPB-202ENST00000438552 NSUN5P1Q3KNT7 163 aa12.66□□□□□ -0.38
SNRPB-202ENST00000438552 UNQ5815/PRO19632Q6UWF5 114 aa12.66□□□□□ -0.38
SNRPB-202ENST00000438552 ADAD2Q8NCV1 583 aaKnown RBP12.66□□□□□ -0.38
SNRPB-202ENST00000438552 AIFM2Q9BRQ8 373 aa12.66□□□□□ -0.38
SNRPB-202ENST00000438552 FAM212BQ9NTI7 297 aaPredicted RBP12.66□□□□□ -0.38
SNRPB-202ENST00000438552 BET1LQ9NYM9 111 aa12.66□□□□□ -0.38
SNRPB-202ENST00000438552 TRAV3A0A0B4J244 114 aa12.65□□□□□ -0.38
SNRPB-202ENST00000438552 TEX13DA0A0J9YY54 714 aaPredicted RBP12.65□□□□□ -0.38
SNRPB-202ENST00000438552 A0A1W2PN81 502 aa12.65□□□□□ -0.38
SNRPB-202ENST00000438552 TCRBV4S1A1TA0A5B7 111 aa12.65□□□□□ -0.38
SNRPB-202ENST00000438552 CRYM-AS1A6NIL9 109 aa12.65□□□□□ -0.38
SNRPB-202ENST00000438552 ADARB2-AS1A8MUL3 147 aa12.65□□□□□ -0.38
SNRPB-202ENST00000438552 ACTL6BO94805 426 aa12.65□□□□□ -0.38
SNRPB-202ENST00000438552 KRASP01116 189 aa12.65□□□□□ -0.38
SNRPB-202ENST00000438552 IGHG4P01861 327 aa12.65□□□□□ -0.38
SNRPB-202ENST00000438552 SERPINE2P07093 398 aa12.65□□□□□ -0.38
SNRPB-202ENST00000438552 APELAP0DMC3 54 aa12.65□□□□□ -0.38
SNRPB-202ENST00000438552 MYOD1P15172 320 aa12.65□□□□□ -0.38
SNRPB-202ENST00000438552 PPIFP30405 207 aaKnown RBP12.65□□□□□ -0.38
SNRPB-202ENST00000438552 CHRNA7P36544 502 aa12.65□□□□□ -0.38
SNRPB-202ENST00000438552 CCR6P51684 374 aa12.65□□□□□ -0.38
SNRPB-202ENST00000438552 CD83Q01151 205 aa12.65□□□□□ -0.38
SNRPB-202ENST00000438552 SP6Q3SY56 376 aa12.65□□□□□ -0.38
SNRPB-202ENST00000438552 LFNGQ8NES3 379 aa12.65□□□□□ -0.38
SNRPB-202ENST00000438552 SRSF12Q8WXF0 261 aaKnown RBP12.65□□□□□ -0.38
SNRPB-202ENST00000438552 TMEM230Q96A57 120 aa12.65□□□□□ -0.38
SNRPB-202ENST00000438552 NAA60Q9H7X0 242 aa12.65□□□□□ -0.38
SNRPB-202ENST00000438552 FOXA2Q9Y261 457 aaPredicted RBP12.65□□□□□ -0.38
SNRPB-202ENST00000438552 NUBP2Q9Y5Y2 271 aa12.65□□□□□ -0.38
SNRPB-202ENST00000438552 SOX15O60248 233 aa12.64□□□□□ -0.39
SNRPB-202ENST00000438552 TSPAN15O95858 294 aa12.64□□□□□ -0.39
SNRPB-202ENST00000438552 RPLP1P05386 114 aaKnown RBP12.64□□□□□ -0.39
SNRPB-202ENST00000438552 OR5AC1P0C628 307 aa12.64□□□□□ -0.39
SNRPB-202ENST00000438552 BTCP35070 178 aa12.64□□□□□ -0.39
SNRPB-202ENST00000438552 RPL8P62917 257 aaKnown RBP12.64□□□□□ -0.39
SNRPB-202ENST00000438552 FOXE3Q13461 319 aa12.64□□□□□ -0.39
SNRPB-202ENST00000438552 ASPHD1Q5U4P2 390 aa12.64□□□□□ -0.39
SNRPB-202ENST00000438552 TEX38Q6PEX7 206 aa12.64□□□□□ -0.39
SNRPB-202ENST00000438552 NDUFA11Q86Y39 141 aa12.64□□□□□ -0.39
SNRPB-202ENST00000438552 COMMD1Q8N668 190 aa12.64□□□□□ -0.39
SNRPB-202ENST00000438552 MINDY2Q8NBR6 621 aa12.64□□□□□ -0.39
SNRPB-202ENST00000438552 OR4A5Q8NH83 315 aa12.64□□□□□ -0.39
SNRPB-202ENST00000438552 CASTOR1Q8WTX7 329 aa12.64□□□□□ -0.39
SNRPB-202ENST00000438552 SCGB3A2Q96PL1 93 aa12.64□□□□□ -0.39
SNRPB-202ENST00000438552 PHB2Q99623 299 aa12.64□□□□□ -0.39
SNRPB-202ENST00000438552 VWFP04275 2813 aa12.64□□□□□ -0.39
SNRPB-202ENST00000438552 NAP1L6A6NFF2 107 aa12.63□□□□□ -0.39
SNRPB-202ENST00000438552 M0QZ24 198 aa12.63□□□□□ -0.39
SNRPB-202ENST00000438552 UPK2O00526 184 aa12.63□□□□□ -0.39
SNRPB-202ENST00000438552 UPK1BO75841 260 aa12.63□□□□□ -0.39
SNRPB-202ENST00000438552 OPN1MWP04001 364 aa12.63□□□□□ -0.39
SNRPB-202ENST00000438552 OR9G9P0C7N8 305 aa12.63□□□□□ -0.39
SNRPB-202ENST00000438552 OPN1MW2P0DN77 364 aa12.63□□□□□ -0.39
SNRPB-202ENST00000438552 OPN1MW3P0DN78 364 aa12.63□□□□□ -0.39
SNRPB-202ENST00000438552 AKR1C4P17516 323 aa12.63□□□□□ -0.39
SNRPB-202ENST00000438552 HLA-GP17693 338 aa12.63□□□□□ -0.39
SNRPB-202ENST00000438552 PSMB8P28062 276 aa12.63□□□□□ -0.39
SNRPB-202ENST00000438552 RPL27AP46776 148 aaKnown RBP12.63□□□□□ -0.39
SNRPB-202ENST00000438552 TMEM267Q0VDI3 215 aaPredicted RBP12.63□□□□□ -0.39
SNRPB-202ENST00000438552 C2orf68Q2NKX9 166 aa12.63□□□□□ -0.39
SNRPB-202ENST00000438552 TRIM16LQ309B1 348 aa12.63□□□□□ -0.39
SNRPB-202ENST00000438552 AKIRIN2Q53H80 203 aa12.63□□□□□ -0.39
SNRPB-202ENST00000438552 CXorf66Q5JRM2 361 aaPredicted RBP12.63□□□□□ -0.39
SNRPB-202ENST00000438552 TMED4Q7Z7H5 227 aa12.63□□□□□ -0.39
SNRPB-202ENST00000438552 SEC22AQ96IW7 307 aa12.63□□□□□ -0.39
SNRPB-202ENST00000438552 TSSC4Q9Y5U2 329 aaPredicted RBP12.63□□□□□ -0.39
SNRPB-202ENST00000438552 TRRAPQ9Y4A5 3859 aa12.63□□□□□ -0.39
SNRPB-202ENST00000438552 A0A1B0GW64 132 aa12.62□□□□□ -0.39
SNRPB-202ENST00000438552 MSGN1A6NI15 193 aa12.62□□□□□ -0.39
SNRPB-202ENST00000438552 CENPXA8MT69 81 aa12.62□□□□□ -0.39
SNRPB-202ENST00000438552 PLA2G10O15496 165 aa12.62□□□□□ -0.39
SNRPB-202ENST00000438552 IGLV1-40P01703 118 aa12.62□□□□□ -0.39
SNRPB-202ENST00000438552 ELANEP08246 267 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms