RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 HLA-DQA1P01909 254 aa5.63□□□□□ -1.51
CSDE1-205ENST00000438362 RBP4P02753 201 aa5.63□□□□□ -1.51
CSDE1-205ENST00000438362 CBLN1P23435 193 aa5.63□□□□□ -1.51
CSDE1-205ENST00000438362 ACP1P24666 158 aa5.63□□□□□ -1.51
CSDE1-205ENST00000438362 CRYBB3P26998 211 aa5.63□□□□□ -1.51
CSDE1-205ENST00000438362 WNT5AP41221 380 aa5.63□□□□□ -1.51
CSDE1-205ENST00000438362 PCSK4Q6UW60 755 aa5.63□□□□□ -1.51
CSDE1-205ENST00000438362 MMD2Q8IY49 270 aa5.63□□□□□ -1.51
CSDE1-205ENST00000438362 STPG3Q8N7X2 389 aa5.63□□□□□ -1.51
CSDE1-205ENST00000438362 OR13A1Q8NGR1 328 aa5.63□□□□□ -1.51
CSDE1-205ENST00000438362 TMEM170AQ8WVE7 144 aa5.63□□□□□ -1.51
CSDE1-205ENST00000438362 WDYHV1Q96HA8 205 aa5.63□□□□□ -1.51
CSDE1-205ENST00000438362 SFXN3Q9BWM7 321 aa5.63□□□□□ -1.51
CSDE1-205ENST00000438362 SEBOXQ9HB31 216 aaPredicted RBP5.63□□□□□ -1.51
CSDE1-205ENST00000438362 NTN3O00634 580 aaPredicted RBP5.63□□□□□ -1.51
CSDE1-205ENST00000438362 SOD3P08294 240 aa5.63□□□□□ -1.51
CSDE1-205ENST00000438362 JOSD1Q15040 202 aaPredicted RBP5.63□□□□□ -1.51
CSDE1-205ENST00000438362 RNF151Q2KHN1 245 aa5.63□□□□□ -1.51
CSDE1-205ENST00000438362 RSPO1Q2MKA7 263 aaPredicted RBP5.63□□□□□ -1.51
CSDE1-205ENST00000438362 TGIF2LXQ8IUE1 241 aa5.63□□□□□ -1.51
CSDE1-205ENST00000438362 RPP25LQ8N5L8 163 aaKnown RBP5.63□□□□□ -1.51
CSDE1-205ENST00000438362 WDR31Q8NA23 367 aa5.63□□□□□ -1.51
CSDE1-205ENST00000438362 CCL13Q99616 98 aa5.63□□□□□ -1.51
CSDE1-205ENST00000438362 PAXXQ9BUH6 204 aa5.63□□□□□ -1.51
CSDE1-205ENST00000438362 OPN3Q9H1Y3 402 aaPredicted RBP5.63□□□□□ -1.51
CSDE1-205ENST00000438362 HSPB7Q9UBY9 170 aa5.63□□□□□ -1.51
CSDE1-205ENST00000438362 CACNA1GO43497 2377 aa5.63□□□□□ -1.51
CSDE1-205ENST00000438362 FER1L5A0AVI2 2057 aa5.63□□□□□ -1.51
CSDE1-205ENST00000438362 RAMP3O60896 148 aa5.63□□□□□ -1.51
CSDE1-205ENST00000438362 IGKV1-5P01602 117 aa5.63□□□□□ -1.51
CSDE1-205ENST00000438362 CELA3BP08861 270 aa5.63□□□□□ -1.51
CSDE1-205ENST00000438362 LINC00869P0C866 280 aa5.63□□□□□ -1.51
CSDE1-205ENST00000438362 HTR1DP28221 377 aa5.63□□□□□ -1.51
CSDE1-205ENST00000438362 PTTG1IPP53801 180 aa5.63□□□□□ -1.51
CSDE1-205ENST00000438362 B3GALT5-AS1P59052 145 aa5.63□□□□□ -1.51
CSDE1-205ENST00000438362 TNXAQ16473 311 aa5.63□□□□□ -1.51
CSDE1-205ENST00000438362 COL5A1-AS1Q5SY13 56 aa5.63□□□□□ -1.51
CSDE1-205ENST00000438362 OR4F17Q8NGA8 305 aa5.63□□□□□ -1.51
CSDE1-205ENST00000438362 OR4B1Q8NGF8 309 aa5.63□□□□□ -1.51
CSDE1-205ENST00000438362 OR51G1Q8NGK1 321 aa5.63□□□□□ -1.51
CSDE1-205ENST00000438362 OR5R1Q8NH85 324 aa5.63□□□□□ -1.51
CSDE1-205ENST00000438362 LEAP2Q969E1 77 aa5.63□□□□□ -1.51
CSDE1-205ENST00000438362 PERPQ96FX8 193 aa5.63□□□□□ -1.51
CSDE1-205ENST00000438362 TIMD4Q96H15 378 aa5.63□□□□□ -1.51
CSDE1-205ENST00000438362 NABP2Q9BQ15 211 aa5.63□□□□□ -1.51
CSDE1-205ENST00000438362 A0A0G2JRQ6 117 aa5.62□□□□□ -1.51
CSDE1-205ENST00000438362 IQCF6A8MYZ5 107 aa5.62□□□□□ -1.51
CSDE1-205ENST00000438362 AHRRA9YTQ3 701 aa5.62□□□□□ -1.51
CSDE1-205ENST00000438362 C1QTNF9BB2RNN3 333 aa5.62□□□□□ -1.51
CSDE1-205ENST00000438362 ISLRO14498 428 aa5.62□□□□□ -1.51
CSDE1-205ENST00000438362 P01737 135 aa5.62□□□□□ -1.51
CSDE1-205ENST00000438362 IL6RP08887 468 aaPredicted RBP5.62□□□□□ -1.51
CSDE1-205ENST00000438362 C8orf88P0DMB2 117 aa5.62□□□□□ -1.51
CSDE1-205ENST00000438362 CD82P27701 267 aa5.62□□□□□ -1.51
CSDE1-205ENST00000438362 REG1BP48304 166 aa5.62□□□□□ -1.51
CSDE1-205ENST00000438362 GFRA1P56159 465 aa5.62□□□□□ -1.51
CSDE1-205ENST00000438362 KIAA1644Q3SXP7 199 aa5.62□□□□□ -1.51
CSDE1-205ENST00000438362 RPL39P5Q59GN2 51 aa5.62□□□□□ -1.51
CSDE1-205ENST00000438362 ATP1A1-AS1Q5TC04 95 aa5.62□□□□□ -1.51
CSDE1-205ENST00000438362 OR2D3Q8NGH3 330 aa5.62□□□□□ -1.51
CSDE1-205ENST00000438362 RPEQ96AT9 228 aa5.62□□□□□ -1.51
CSDE1-205ENST00000438362 DCTN5Q9BTE1 182 aa5.62□□□□□ -1.51
CSDE1-205ENST00000438362 SAP30LQ9HAJ7 183 aa5.62□□□□□ -1.51
CSDE1-205ENST00000438362 TRBV6-6A0A0A6YYG2 114 aa5.62□□□□□ -1.51
CSDE1-205ENST00000438362 IGLV3-1P01715 115 aa5.62□□□□□ -1.51
CSDE1-205ENST00000438362 LYZP61626 148 aa5.62□□□□□ -1.51
CSDE1-205ENST00000438362 FXYD3Q14802 87 aa5.62□□□□□ -1.51
CSDE1-205ENST00000438362 HERPUD1Q15011 391 aa5.62□□□□□ -1.51
CSDE1-205ENST00000438362 BMPERQ8N8U9 685 aa5.62□□□□□ -1.51
CSDE1-205ENST00000438362 ZNRF1Q8ND25 227 aa5.62□□□□□ -1.51
CSDE1-205ENST00000438362 OR4C5Q8NGB2 326 aa5.62□□□□□ -1.51
CSDE1-205ENST00000438362 NDUFAF3Q9BU61 184 aa5.62□□□□□ -1.51
CSDE1-205ENST00000438362 ELOVL1Q9BW60 279 aa5.62□□□□□ -1.51
CSDE1-205ENST00000438362 TMEM191AQ9H0A3 160 aa5.62□□□□□ -1.51
CSDE1-205ENST00000438362 MS4A5Q9H3V2 200 aa5.62□□□□□ -1.51
CSDE1-205ENST00000438362 HIF1ANQ9NWT6 349 aa5.62□□□□□ -1.51
CSDE1-205ENST00000438362 SCO2A0A1W2PP80 73 aa5.62□□□□□ -1.51
CSDE1-205ENST00000438362 NKX2-8O15522 239 aa5.62□□□□□ -1.51
CSDE1-205ENST00000438362 COL8A1P27658 744 aa5.62□□□□□ -1.51
CSDE1-205ENST00000438362 TAS2R60P59551 318 aa5.62□□□□□ -1.51
CSDE1-205ENST00000438362 SELENOTP62341 195 aa5.62□□□□□ -1.51
CSDE1-205ENST00000438362 RPL8P62917 257 aaKnown RBP5.62□□□□□ -1.51
CSDE1-205ENST00000438362 CCL8P80075 99 aa5.62□□□□□ -1.51
CSDE1-205ENST00000438362 PRSS3P2Q8NHM4 247 aa5.62□□□□□ -1.51
CSDE1-205ENST00000438362 NDFIP1Q9BT67 221 aa5.62□□□□□ -1.51
CSDE1-205ENST00000438362 AAMDCQ9H7C9 122 aa5.62□□□□□ -1.51
CSDE1-205ENST00000438362 WDR83OSQ9Y284 106 aa5.62□□□□□ -1.51
CSDE1-205ENST00000438362 KLF2Q9Y5W3 355 aaPredicted RBP5.62□□□□□ -1.51
CSDE1-205ENST00000438362 RIF1Q5UIP0 2472 aaKnown RBP5.61□□□□□ -1.51
CSDE1-205ENST00000438362 TRBV9A0A0B4J1U6 114 aa5.61□□□□□ -1.51
CSDE1-205ENST00000438362 SLC17A3O00476 420 aa5.61□□□□□ -1.51
CSDE1-205ENST00000438362 KLK10O43240 276 aa5.61□□□□□ -1.51
CSDE1-205ENST00000438362 TMEM50AO95807 157 aa5.61□□□□□ -1.51
CSDE1-205ENST00000438362 CA2P00918 260 aa5.61□□□□□ -1.51
CSDE1-205ENST00000438362 SNRPCP09234 159 aaKnown RBP5.61□□□□□ -1.51
CSDE1-205ENST00000438362 CECR9P0C854 216 aa5.61□□□□□ -1.51
CSDE1-205ENST00000438362 RNF224P0DH78 156 aa5.61□□□□□ -1.51
CSDE1-205ENST00000438362 PRRX1P54821 245 aa5.61□□□□□ -1.51
CSDE1-205ENST00000438362 ZNF146Q15072 292 aa5.61□□□□□ -1.51
CSDE1-205ENST00000438362 CENPWQ5EE01 88 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms