RNA–Protein interactions for RNA: ENST00000429162.2

CASC4-203, Transcript of cancer susceptibility 4, humanhuman

TSL 2

Gene CASC4, Length 1,918 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-203ENST00000429162 GGACTQ9BVM4 153 aa16.17■□□□□ 0.18
CASC4-203ENST00000429162 UNKLQ9H9P5 680 aaKnown RBP16.17■□□□□ 0.18
CASC4-203ENST00000429162 ENY2Q9NPA8 101 aa16.17■□□□□ 0.18
CASC4-203ENST00000429162 ARFGEF3Q5TH69 2177 aa16.17■□□□□ 0.18
CASC4-203ENST00000429162 SPTBN4Q9H254 2564 aa16.16■□□□□ 0.18
CASC4-203ENST00000429162 A0A087X0M5 115 aa16.16■□□□□ 0.18
CASC4-203ENST00000429162 A0A1B0GX30 115 aa16.16■□□□□ 0.18
CASC4-203ENST00000429162 J3QR06 171 aa16.16■□□□□ 0.18
CASC4-203ENST00000429162 ZNF726P1Q15940 193 aa16.16■□□□□ 0.18
CASC4-203ENST00000429162 HAGHQ16775 308 aa16.16■□□□□ 0.18
CASC4-203ENST00000429162 ETV3LQ6ZN32 361 aa16.16■□□□□ 0.18
CASC4-203ENST00000429162 OSR1Q8TAX0 266 aaPredicted RBP16.16■□□□□ 0.18
CASC4-203ENST00000429162 NPCDR1Q9BY65 106 aa16.16■□□□□ 0.18
CASC4-203ENST00000429162 IGHV2-70P01814 119 aa16.15■□□□□ 0.18
CASC4-203ENST00000429162 MDKP21741 143 aaPredicted RBP16.15■□□□□ 0.18
CASC4-203ENST00000429162 COL8A2P25067 703 aa16.15■□□□□ 0.18
CASC4-203ENST00000429162 TMEM88Q6PEY1 159 aa16.15■□□□□ 0.18
CASC4-203ENST00000429162 TMEM186Q96B77 213 aa16.15■□□□□ 0.18
CASC4-203ENST00000429162 RAB1BQ9H0U4 201 aa16.15■□□□□ 0.18
CASC4-203ENST00000429162 OR51B2Q9Y5P1 312 aa16.15■□□□□ 0.18
CASC4-203ENST00000429162 SPTA1P02549 2419 aa16.15■□□□□ 0.18
CASC4-203ENST00000429162 LYNX1G3V0Z9 82 aa16.15■□□□□ 0.18
CASC4-203ENST00000429162 UPK2O00526 184 aa16.15■□□□□ 0.18
CASC4-203ENST00000429162 HSPB1P04792 205 aaKnown RBP16.15■□□□□ 0.18
CASC4-203ENST00000429162 IL6RP08887 468 aaPredicted RBP16.15■□□□□ 0.18
CASC4-203ENST00000429162 LYNX1P0DP58 116 aa16.15■□□□□ 0.18
CASC4-203ENST00000429162 ICAM4Q14773 271 aa16.15■□□□□ 0.18
CASC4-203ENST00000429162 KHDC3LQ587J8 217 aa16.15■□□□□ 0.18
CASC4-203ENST00000429162 LCN15Q6UWW0 184 aa16.15■□□□□ 0.18
CASC4-203ENST00000429162 CBLN2Q8IUK8 224 aa16.15■□□□□ 0.18
CASC4-203ENST00000429162 OR9G1Q8NH87 305 aa16.15■□□□□ 0.18
CASC4-203ENST00000429162 RALYQ9UKM9 306 aaKnown RBP16.15■□□□□ 0.18
CASC4-203ENST00000429162 WDR83OSQ9Y284 106 aa16.15■□□□□ 0.18
CASC4-203ENST00000429162 ZNF257Q9Y2Q1 563 aa16.15■□□□□ 0.18
CASC4-203ENST00000429162 YLPM1P49750 1951 aaKnown RBP16.15■□□□□ 0.18
CASC4-203ENST00000429162 LOC102723971A0A1B0GUV8 181 aa16.14■□□□□ 0.17
CASC4-203ENST00000429162 MAP1LC3B2A6NCE7 125 aa16.14■□□□□ 0.17
CASC4-203ENST00000429162 H0YJW9 148 aa16.14■□□□□ 0.17
CASC4-203ENST00000429162 IGKV1-16P04430 117 aa16.14■□□□□ 0.17
CASC4-203ENST00000429162 OR13C7P0DN81 318 aa16.14■□□□□ 0.17
CASC4-203ENST00000429162 IGHV1-8P0DP01 117 aa16.14■□□□□ 0.17
CASC4-203ENST00000429162 ATF4P18848 351 aaPredicted RBP16.14■□□□□ 0.17
CASC4-203ENST00000429162 CD1BP29016 333 aa16.14■□□□□ 0.17
CASC4-203ENST00000429162 SOHLH1Q5JUK2 328 aa16.14■□□□□ 0.17
CASC4-203ENST00000429162 ACSM6Q6P461 480 aa16.14■□□□□ 0.17
CASC4-203ENST00000429162 OR5AN1Q8NGI8 311 aa16.14■□□□□ 0.17
CASC4-203ENST00000429162 MAP1LC3BQ9GZQ8 125 aa16.14■□□□□ 0.17
CASC4-203ENST00000429162 CBLN4Q9NTU7 201 aa16.14■□□□□ 0.17
CASC4-203ENST00000429162 BET1LQ9NYM9 111 aa16.14■□□□□ 0.17
CASC4-203ENST00000429162 H7C2Y5 167 aa16.13■□□□□ 0.17
CASC4-203ENST00000429162 SOX15O60248 233 aa16.13■□□□□ 0.17
CASC4-203ENST00000429162 SRP19P09132 144 aaKnown RBP16.13■□□□□ 0.17
CASC4-203ENST00000429162 IL3RAP26951 378 aa16.13■□□□□ 0.17
CASC4-203ENST00000429162 ZNF137PP52743 207 aa16.13■□□□□ 0.17
CASC4-203ENST00000429162 DLK1P80370 383 aa16.13■□□□□ 0.17
CASC4-203ENST00000429162 FFAR4Q5NUL3 377 aa16.13■□□□□ 0.17
CASC4-203ENST00000429162 FKBP11Q9NYL4 201 aa16.13■□□□□ 0.17
CASC4-203ENST00000429162 GNG13Q9P2W3 67 aa16.13■□□□□ 0.17
CASC4-203ENST00000429162 A0A1W2PPH5 198 aa16.13■□□□□ 0.17
CASC4-203ENST00000429162 RRHO14718 337 aa16.13■□□□□ 0.17
CASC4-203ENST00000429162 MPDU1O75352 247 aa16.13■□□□□ 0.17
CASC4-203ENST00000429162 IFNA1P01562 189 aa16.13■□□□□ 0.17
CASC4-203ENST00000429162 TMEM177Q53S58 311 aa16.13■□□□□ 0.17
CASC4-203ENST00000429162 SSX7Q7RTT5 188 aa16.13■□□□□ 0.17
CASC4-203ENST00000429162 SLC24A4Q8NFF2 622 aa16.13■□□□□ 0.17
CASC4-203ENST00000429162 HARBI1Q96MB7 349 aa16.13■□□□□ 0.17
CASC4-203ENST00000429162 TMEM133Q9H2Q1 129 aa16.13■□□□□ 0.17
CASC4-203ENST00000429162 PRSS46E5RG02 174 aa16.12■□□□□ 0.17
CASC4-203ENST00000429162 KBTBD11O94819 623 aa16.12■□□□□ 0.17
CASC4-203ENST00000429162 SAA1P0DJI8 122 aaPredicted RBP16.12■□□□□ 0.17
CASC4-203ENST00000429162 NPY1RP25929 384 aa16.12■□□□□ 0.17
CASC4-203ENST00000429162 PRCDQ00LT1 54 aa16.12■□□□□ 0.17
CASC4-203ENST00000429162 HNF4GQ14541 408 aa16.12■□□□□ 0.17
CASC4-203ENST00000429162 PDPNQ86YL7 162 aa16.12■□□□□ 0.17
CASC4-203ENST00000429162 ABHD12Q8N2K0 398 aa16.12■□□□□ 0.17
CASC4-203ENST00000429162 RXFP4Q8TDU9 374 aa16.12■□□□□ 0.17
CASC4-203ENST00000429162 NABP2Q9BQ15 211 aa16.12■□□□□ 0.17
CASC4-203ENST00000429162 PLEKHA3Q9HB20 300 aa16.12■□□□□ 0.17
CASC4-203ENST00000429162 SLC39A9Q9NUM3 307 aa16.12■□□□□ 0.17
CASC4-203ENST00000429162 ROS1P08922 2347 aa16.12■□□□□ 0.17
CASC4-203ENST00000429162 PKDREJQ9NTG1 2253 aa16.12■□□□□ 0.17
CASC4-203ENST00000429162 CTXND1A0A1B0GTU2 59 aa16.11■□□□□ 0.17
CASC4-203ENST00000429162 SMCO3A2RU48 225 aa16.11■□□□□ 0.17
CASC4-203ENST00000429162 IFNA4P05014 189 aa16.11■□□□□ 0.17
CASC4-203ENST00000429162 BCL2P10415 239 aa16.11■□□□□ 0.17
CASC4-203ENST00000429162 AWAT1Q58HT5 328 aa16.11■□□□□ 0.17
CASC4-203ENST00000429162 RPP25LQ8N5L8 163 aaKnown RBP16.11■□□□□ 0.17
CASC4-203ENST00000429162 OR10G4Q8NGN3 311 aa16.11■□□□□ 0.17
CASC4-203ENST00000429162 OR10G9Q8NGN4 311 aa16.11■□□□□ 0.17
CASC4-203ENST00000429162 OR10G7Q8NGN6 311 aa16.11■□□□□ 0.17
CASC4-203ENST00000429162 TNFRSF14Q92956 283 aa16.11■□□□□ 0.17
CASC4-203ENST00000429162 ST6GALNAC6Q969X2 333 aa16.11■□□□□ 0.17
CASC4-203ENST00000429162 PCGF1Q9BSM1 259 aa16.11■□□□□ 0.17
CASC4-203ENST00000429162 LOC105371267A0A1B0GV96 52 aa16.11■□□□□ 0.17
CASC4-203ENST00000429162 SRRM4A7MD48 611 aaKnown RBP16.11■□□□□ 0.17
CASC4-203ENST00000429162 M0R036 132 aa16.11■□□□□ 0.17
CASC4-203ENST00000429162 IGKV1D-33P01593 117 aa16.11■□□□□ 0.17
CASC4-203ENST00000429162 IGKV1-33P01594 117 aa16.11■□□□□ 0.17
CASC4-203ENST00000429162 REG1BP48304 166 aa16.11■□□□□ 0.17
CASC4-203ENST00000429162 RAB13P51153 203 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms