RNA–Protein interactions for RNA: ENST00000423960.1

FOXN4-203, Transcript of forkhead box N4, humanhuman

TSL 1 (best)

Gene FOXN4, Length 1,219 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4-203ENST00000423960 DHODHQ02127 395 aa13.4□□□□□ -0.26
FOXN4-203ENST00000423960 FXYD3Q14802 87 aa13.4□□□□□ -0.26
FOXN4-203ENST00000423960 MRGPRG-AS1Q2M3A8 158 aa13.4□□□□□ -0.26
FOXN4-203ENST00000423960 TRIM16LQ309B1 348 aa13.4□□□□□ -0.26
FOXN4-203ENST00000423960 MMD2Q8IY49 270 aa13.4□□□□□ -0.26
FOXN4-203ENST00000423960 CENPSQ8N2Z9 138 aa13.4□□□□□ -0.26
FOXN4-203ENST00000423960 OR4A5Q8NH83 315 aa13.4□□□□□ -0.26
FOXN4-203ENST00000423960 TMEM167AQ8TBQ9 72 aa13.4□□□□□ -0.26
FOXN4-203ENST00000423960 CHPT1Q8WUD6 406 aa13.4□□□□□ -0.26
FOXN4-203ENST00000423960 TSC22D3Q99576 134 aa13.4□□□□□ -0.26
FOXN4-203ENST00000423960 ZNF430Q9H8G1 570 aaPredicted RBP13.4□□□□□ -0.26
FOXN4-203ENST00000423960 PARP11Q9NR21 331 aa13.4□□□□□ -0.26
FOXN4-203ENST00000423960 BET1LQ9NYM9 111 aa13.4□□□□□ -0.26
FOXN4-203ENST00000423960 FLVCR2Q9UPI3 526 aa13.4□□□□□ -0.26
FOXN4-203ENST00000423960 MARCH11A6NNE9 402 aa13.39□□□□□ -0.27
FOXN4-203ENST00000423960 ARPC1BO15143 372 aaKnown RBP13.39□□□□□ -0.27
FOXN4-203ENST00000423960 ACTL6BO94805 426 aa13.39□□□□□ -0.27
FOXN4-203ENST00000423960 KBTBD11O94819 623 aa13.39□□□□□ -0.27
FOXN4-203ENST00000423960 IL6RP08887 468 aaPredicted RBP13.39□□□□□ -0.27
FOXN4-203ENST00000423960 SLC6A1P30531 599 aa13.39□□□□□ -0.27
FOXN4-203ENST00000423960 NDPQ00604 133 aa13.39□□□□□ -0.27
FOXN4-203ENST00000423960 TMEM128Q5BJH2 165 aa13.39□□□□□ -0.27
FOXN4-203ENST00000423960 SLC25A42Q86VD7 318 aa13.39□□□□□ -0.27
FOXN4-203ENST00000423960 CADM3Q8N126 398 aa13.39□□□□□ -0.27
FOXN4-203ENST00000423960 STPG2Q8N412 459 aa13.39□□□□□ -0.27
FOXN4-203ENST00000423960 ABHD5Q8WTS1 349 aa13.39□□□□□ -0.27
FOXN4-203ENST00000423960 GLYATL2Q8WU03 294 aa13.39□□□□□ -0.27
FOXN4-203ENST00000423960 WFDC12Q8WWY7 111 aa13.39□□□□□ -0.27
FOXN4-203ENST00000423960 GALNT14Q96FL9 552 aa13.39□□□□□ -0.27
FOXN4-203ENST00000423960 ZNF747Q9BV97 191 aa13.39□□□□□ -0.27
FOXN4-203ENST00000423960 TMEM222Q9H0R3 208 aa13.39□□□□□ -0.27
FOXN4-203ENST00000423960 TMEM140Q9NV12 185 aa13.39□□□□□ -0.27
FOXN4-203ENST00000423960 FAM240BA0A1B0GVZ2 78 aa13.38□□□□□ -0.27
FOXN4-203ENST00000423960 UPK2O00526 184 aa13.38□□□□□ -0.27
FOXN4-203ENST00000423960 ATP6V0E1O15342 81 aa13.38□□□□□ -0.27
FOXN4-203ENST00000423960 ATG12O94817 140 aa13.38□□□□□ -0.27
FOXN4-203ENST00000423960 CDS2O95674 445 aa13.38□□□□□ -0.27
FOXN4-203ENST00000423960 TCRBP04435 133 aa13.38□□□□□ -0.27
FOXN4-203ENST00000423960 EGR2P11161 476 aaPredicted RBP13.38□□□□□ -0.27
FOXN4-203ENST00000423960 ANXA3P12429 323 aa13.38□□□□□ -0.27
FOXN4-203ENST00000423960 VDAC1P21796 283 aa13.38□□□□□ -0.27
FOXN4-203ENST00000423960 KRTAP10-3P60369 221 aa13.38□□□□□ -0.27
FOXN4-203ENST00000423960 SUPT4H1P63272 117 aaKnown RBP13.38□□□□□ -0.27
FOXN4-203ENST00000423960 TNXAQ16473 311 aa13.38□□□□□ -0.27
FOXN4-203ENST00000423960 ARPC1AQ92747 370 aa13.38□□□□□ -0.27
FOXN4-203ENST00000423960 SEC22AQ96IW7 307 aa13.38□□□□□ -0.27
FOXN4-203ENST00000423960 GON7Q9BXV9 100 aa13.38□□□□□ -0.27
FOXN4-203ENST00000423960 ZNF580Q9UK33 172 aa13.38□□□□□ -0.27
FOXN4-203ENST00000423960 WSB1Q9Y6I7 421 aa13.38□□□□□ -0.27
FOXN4-203ENST00000423960 PSMB11A5LHX3 300 aa13.37□□□□□ -0.27
FOXN4-203ENST00000423960 MAS1LP35410 378 aa13.37□□□□□ -0.27
FOXN4-203ENST00000423960 DEFA1P59665 94 aa13.37□□□□□ -0.27
FOXN4-203ENST00000423960 DEFA3P59666 94 aa13.37□□□□□ -0.27
FOXN4-203ENST00000423960 UBE2MP61081 183 aaKnown RBP13.37□□□□□ -0.27
FOXN4-203ENST00000423960 RPL8P62917 257 aaKnown RBP13.37□□□□□ -0.27
FOXN4-203ENST00000423960 SLC35B1P78383 322 aa13.37□□□□□ -0.27
FOXN4-203ENST00000423960 SSBP2P81877 361 aaPredicted RBP13.37□□□□□ -0.27
FOXN4-203ENST00000423960 TMEM267Q0VDI3 215 aaPredicted RBP13.37□□□□□ -0.27
FOXN4-203ENST00000423960 TMEM187Q14656 261 aa13.37□□□□□ -0.27
FOXN4-203ENST00000423960 ZNF695Q8IW36 515 aa13.37□□□□□ -0.27
FOXN4-203ENST00000423960 OR5AU1Q8NGC0 362 aa13.37□□□□□ -0.27
FOXN4-203ENST00000423960 SGMS2Q8NHU3 365 aa13.37□□□□□ -0.27
FOXN4-203ENST00000423960 GRPEL2Q8TAA5 225 aa13.37□□□□□ -0.27
FOXN4-203ENST00000423960 WIPF2Q8TF74 440 aaPredicted RBP13.37□□□□□ -0.27
FOXN4-203ENST00000423960 FBXO7Q9Y3I1 522 aa13.37□□□□□ -0.27
FOXN4-203ENST00000423960 NUBP2Q9Y5Y2 271 aa13.37□□□□□ -0.27
FOXN4-203ENST00000423960 TRAV3A0A0B4J244 114 aa13.36□□□□□ -0.27
FOXN4-203ENST00000423960 TRAV41A0A0B4J266 112 aa13.36□□□□□ -0.27
FOXN4-203ENST00000423960 SNAPC5O75971 98 aa13.36□□□□□ -0.27
FOXN4-203ENST00000423960 HLA-GP17693 338 aa13.36□□□□□ -0.27
FOXN4-203ENST00000423960 VAMP1P23763 118 aa13.36□□□□□ -0.27
FOXN4-203ENST00000423960 CRIP2P52943 208 aaPredicted RBP13.36□□□□□ -0.27
FOXN4-203ENST00000423960 H2BFWTQ7Z2G1 175 aa13.36□□□□□ -0.27
FOXN4-203ENST00000423960 ZNF329Q86UD4 541 aa13.36□□□□□ -0.27
FOXN4-203ENST00000423960 SELENOHQ8IZQ5 122 aaKnown RBP13.36□□□□□ -0.27
FOXN4-203ENST00000423960 RBPMSQ93062 196 aaKnown RBP13.36□□□□□ -0.27
FOXN4-203ENST00000423960 TMEM56Q96MV1 263 aa13.36□□□□□ -0.27
FOXN4-203ENST00000423960 FAM103A1Q9BTL3 118 aaKnown RBP13.36□□□□□ -0.27
FOXN4-203ENST00000423960 TMEM56-RWDD3S4R434 201 aa13.36□□□□□ -0.27
FOXN4-203ENST00000423960 MSGN1A6NI15 193 aa13.35□□□□□ -0.27
FOXN4-203ENST00000423960 G3V318 75 aa13.35□□□□□ -0.27
FOXN4-203ENST00000423960 SFT2D2O95562 160 aa13.35□□□□□ -0.27
FOXN4-203ENST00000423960 IGKV1-5P01602 117 aa13.35□□□□□ -0.27
FOXN4-203ENST00000423960 FGF2P09038 288 aa13.35□□□□□ -0.27
FOXN4-203ENST00000423960 OR9G9P0C7N8 305 aa13.35□□□□□ -0.27
FOXN4-203ENST00000423960 AKR1C2P52895 323 aa13.35□□□□□ -0.27
FOXN4-203ENST00000423960 SRSF4Q08170 494 aaKnown RBP13.35□□□□□ -0.27
FOXN4-203ENST00000423960 PPP1R1AQ13522 171 aa13.35□□□□□ -0.27
FOXN4-203ENST00000423960 AKIRIN2Q53H80 203 aa13.35□□□□□ -0.27
FOXN4-203ENST00000423960 TMEM268Q5VZI3 342 aa13.35□□□□□ -0.27
FOXN4-203ENST00000423960 LFNGQ8NES3 379 aa13.35□□□□□ -0.27
FOXN4-203ENST00000423960 LHFPL5Q8TAF8 219 aa13.35□□□□□ -0.27
FOXN4-203ENST00000423960 ENKURQ8TC29 256 aa13.35□□□□□ -0.27
FOXN4-203ENST00000423960 SRSF12Q8WXF0 261 aaKnown RBP13.35□□□□□ -0.27
FOXN4-203ENST00000423960 IL22RA2Q969J5 263 aa13.35□□□□□ -0.27
FOXN4-203ENST00000423960 RRNAD1Q96FB5 475 aaKnown RBP13.35□□□□□ -0.27
FOXN4-203ENST00000423960 C20orf85Q9H1P6 137 aa13.35□□□□□ -0.27
FOXN4-203ENST00000423960 H2AFB2P0C5Z0 115 aa13.34□□□□□ -0.27
FOXN4-203ENST00000423960 OR4E1P0C645 316 aa13.34□□□□□ -0.27
FOXN4-203ENST00000423960 ANXA7P20073 488 aaKnown RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms