RNA–Protein interactions for RNA: ENST00000422991.1

COL7A1-202, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-202ENST00000422991 G6PCP35575 357 aa13.43□□□□□ -0.26
COL7A1-202ENST00000422991 VDAC2P45880 294 aaPredicted RBP13.43□□□□□ -0.26
COL7A1-202ENST00000422991 SSBP2P81877 361 aaPredicted RBP13.43□□□□□ -0.26
COL7A1-202ENST00000422991 NDPQ00604 133 aa13.43□□□□□ -0.26
COL7A1-202ENST00000422991 PJVKQ0ZLH3 352 aa13.43□□□□□ -0.26
COL7A1-202ENST00000422991 PRSS8Q16651 343 aa13.43□□□□□ -0.26
COL7A1-202ENST00000422991 ARSJQ5FYB0 599 aaPredicted RBP13.43□□□□□ -0.26
COL7A1-202ENST00000422991 SLC35E3Q7Z769 313 aa13.43□□□□□ -0.26
COL7A1-202ENST00000422991 CADM3Q8N126 398 aa13.43□□□□□ -0.26
COL7A1-202ENST00000422991 DUSP18Q8NEJ0 188 aa13.43□□□□□ -0.26
COL7A1-202ENST00000422991 LHFPL5Q8TAF8 219 aa13.43□□□□□ -0.26
COL7A1-202ENST00000422991 TMEM167AQ8TBQ9 72 aa13.43□□□□□ -0.26
COL7A1-202ENST00000422991 TMEM56Q96MV1 263 aa13.43□□□□□ -0.26
COL7A1-202ENST00000422991 CLCC1Q96S66 551 aa13.43□□□□□ -0.26
COL7A1-202ENST00000422991 ZNF430Q9H8G1 570 aaPredicted RBP13.43□□□□□ -0.26
COL7A1-202ENST00000422991 SERTAD4Q9NUC0 356 aa13.43□□□□□ -0.26
COL7A1-202ENST00000422991 TMEM56-RWDD3S4R434 201 aa13.43□□□□□ -0.26
COL7A1-202ENST00000422991 KCNAB3O43448 404 aa13.42□□□□□ -0.26
COL7A1-202ENST00000422991 CREBL2O60519 120 aaPredicted RBP13.42□□□□□ -0.26
COL7A1-202ENST00000422991 SFT2D2O95562 160 aa13.42□□□□□ -0.26
COL7A1-202ENST00000422991 IL6RP08887 468 aaPredicted RBP13.42□□□□□ -0.26
COL7A1-202ENST00000422991 H2AFB2P0C5Z0 115 aa13.42□□□□□ -0.26
COL7A1-202ENST00000422991 ANXA3P12429 323 aa13.42□□□□□ -0.26
COL7A1-202ENST00000422991 CX3CL1P78423 397 aa13.42□□□□□ -0.26
COL7A1-202ENST00000422991 OR4A5Q8NH83 315 aa13.42□□□□□ -0.26
COL7A1-202ENST00000422991 RBPMSQ93062 196 aaKnown RBP13.42□□□□□ -0.26
COL7A1-202ENST00000422991 ALX4Q9H161 411 aaPredicted RBP13.42□□□□□ -0.26
COL7A1-202ENST00000422991 OR51J1Q9H342 316 aa13.42□□□□□ -0.26
COL7A1-202ENST00000422991 BEX1Q9HBH7 125 aa13.42□□□□□ -0.26
COL7A1-202ENST00000422991 PRR13Q9NZ81 148 aa13.42□□□□□ -0.26
COL7A1-202ENST00000422991 MMP24Q9Y5R2 645 aa13.42□□□□□ -0.26
COL7A1-202ENST00000422991 CLPSL1A2RUU4 121 aa13.41□□□□□ -0.26
COL7A1-202ENST00000422991 LINC01548A6NM66 108 aa13.41□□□□□ -0.26
COL7A1-202ENST00000422991 IGKV1-5P01602 117 aa13.41□□□□□ -0.26
COL7A1-202ENST00000422991 OR4E1P0C645 316 aa13.41□□□□□ -0.26
COL7A1-202ENST00000422991 P0C879 139 aa13.41□□□□□ -0.26
COL7A1-202ENST00000422991 MECP2P51608 486 aaKnown RBP13.41□□□□□ -0.26
COL7A1-202ENST00000422991 SRPXP78539 464 aa13.41□□□□□ -0.26
COL7A1-202ENST00000422991 FOXL1Q12952 345 aa13.41□□□□□ -0.26
COL7A1-202ENST00000422991 DHRS2Q13268 280 aa13.41□□□□□ -0.26
COL7A1-202ENST00000422991 ZNF562Q6V9R5 426 aa13.41□□□□□ -0.26
COL7A1-202ENST00000422991 MMD2Q8IY49 270 aa13.41□□□□□ -0.26
COL7A1-202ENST00000422991 SELENOHQ8IZQ5 122 aaKnown RBP13.41□□□□□ -0.26
COL7A1-202ENST00000422991 IL22RA2Q969J5 263 aa13.41□□□□□ -0.26
COL7A1-202ENST00000422991 ANK2Q01484 3957 aa13.4□□□□□ -0.26
COL7A1-202ENST00000422991 TRAV3A0A0B4J244 114 aa13.4□□□□□ -0.26
COL7A1-202ENST00000422991 A0A1B0GUS0 222 aa13.4□□□□□ -0.26
COL7A1-202ENST00000422991 C9orf170A2RU37 121 aa13.4□□□□□ -0.26
COL7A1-202ENST00000422991 UPK2O00526 184 aa13.4□□□□□ -0.26
COL7A1-202ENST00000422991 ATG12O94817 140 aa13.4□□□□□ -0.26
COL7A1-202ENST00000422991 PTTG1O95997 202 aa13.4□□□□□ -0.26
COL7A1-202ENST00000422991 HLA-AP01891 365 aaKnown RBP13.4□□□□□ -0.26
COL7A1-202ENST00000422991 FGF2P09038 288 aa13.4□□□□□ -0.26
COL7A1-202ENST00000422991 AKR1C2P52895 323 aa13.4□□□□□ -0.26
COL7A1-202ENST00000422991 GNB1P62873 340 aa13.4□□□□□ -0.26
COL7A1-202ENST00000422991 ANKRD55Q3KP44 614 aa13.4□□□□□ -0.26
COL7A1-202ENST00000422991 C4orf46Q504U0 113 aa13.4□□□□□ -0.26
COL7A1-202ENST00000422991 TMEM268Q5VZI3 342 aa13.4□□□□□ -0.26
COL7A1-202ENST00000422991 LYG2Q86SG7 212 aa13.4□□□□□ -0.26
COL7A1-202ENST00000422991 ZNF695Q8IW36 515 aa13.4□□□□□ -0.26
COL7A1-202ENST00000422991 FOXRED2Q8IWF2 684 aa13.4□□□□□ -0.26
COL7A1-202ENST00000422991 CASTOR1Q8WTX7 329 aa13.4□□□□□ -0.26
COL7A1-202ENST00000422991 ARPC1AQ92747 370 aa13.4□□□□□ -0.26
COL7A1-202ENST00000422991 PARP11Q9NR21 331 aa13.4□□□□□ -0.26
COL7A1-202ENST00000422991 ZNF580Q9UK33 172 aa13.4□□□□□ -0.26
COL7A1-202ENST00000422991 FBXO7Q9Y3I1 522 aa13.4□□□□□ -0.26
COL7A1-202ENST00000422991 RNF114Q9Y508 228 aa13.4□□□□□ -0.26
COL7A1-202ENST00000422991 AP4M1O00189 453 aa13.39□□□□□ -0.27
COL7A1-202ENST00000422991 ATP6V0E1O15342 81 aa13.39□□□□□ -0.27
COL7A1-202ENST00000422991 IGF1P05019 195 aa13.39□□□□□ -0.27
COL7A1-202ENST00000422991 OR9G9P0C7N8 305 aa13.39□□□□□ -0.27
COL7A1-202ENST00000422991 SPNP16150 400 aa13.39□□□□□ -0.27
COL7A1-202ENST00000422991 MAS1LP35410 378 aa13.39□□□□□ -0.27
COL7A1-202ENST00000422991 COMPP49747 757 aaPredicted RBP13.39□□□□□ -0.27
COL7A1-202ENST00000422991 RAB25P57735 213 aa13.39□□□□□ -0.27
COL7A1-202ENST00000422991 PROK1P58294 105 aa13.39□□□□□ -0.27
COL7A1-202ENST00000422991 RPL8P62917 257 aaKnown RBP13.39□□□□□ -0.27
COL7A1-202ENST00000422991 FXYD3Q14802 87 aa13.39□□□□□ -0.27
COL7A1-202ENST00000422991 TNXAQ16473 311 aa13.39□□□□□ -0.27
COL7A1-202ENST00000422991 AWAT1Q58HT5 328 aa13.39□□□□□ -0.27
COL7A1-202ENST00000422991 PLET1Q6UQ28 207 aa13.39□□□□□ -0.27
COL7A1-202ENST00000422991 H2BFWTQ7Z2G1 175 aa13.39□□□□□ -0.27
COL7A1-202ENST00000422991 LGI3Q8N145 548 aa13.39□□□□□ -0.27
COL7A1-202ENST00000422991 SLC35G3Q8N808 338 aa13.39□□□□□ -0.27
COL7A1-202ENST00000422991 NOL4LQ96MY1 436 aaPredicted RBP13.39□□□□□ -0.27
COL7A1-202ENST00000422991 WNT10AQ9GZT5 417 aa13.39□□□□□ -0.27
COL7A1-202ENST00000422991 A0A0G2JRQ6 117 aa13.38□□□□□ -0.27
COL7A1-202ENST00000422991 CNIH1O95406 144 aa13.38□□□□□ -0.27
COL7A1-202ENST00000422991 DUS4LO95620 317 aaKnown RBP13.38□□□□□ -0.27
COL7A1-202ENST00000422991 EGR2P11161 476 aaPredicted RBP13.38□□□□□ -0.27
COL7A1-202ENST00000422991 HLA-GP17693 338 aa13.38□□□□□ -0.27
COL7A1-202ENST00000422991 CRIP2P52943 208 aaPredicted RBP13.38□□□□□ -0.27
COL7A1-202ENST00000422991 C10orf55Q5SWW7 151 aa13.38□□□□□ -0.27
COL7A1-202ENST00000422991 STPG2Q8N412 459 aa13.38□□□□□ -0.27
COL7A1-202ENST00000422991 LRTM2Q8N967 370 aa13.38□□□□□ -0.27
COL7A1-202ENST00000422991 GRPEL2Q8TAA5 225 aa13.38□□□□□ -0.27
COL7A1-202ENST00000422991 RRNAD1Q96FB5 475 aaKnown RBP13.38□□□□□ -0.27
COL7A1-202ENST00000422991 MARVELD1Q9BSK0 173 aa13.38□□□□□ -0.27
COL7A1-202ENST00000422991 LINC00527Q9UJ94 153 aa13.38□□□□□ -0.27
COL7A1-202ENST00000422991 FBN3Q75N90 2809 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms