RNA–Protein interactions for RNA: ENST00000417664.6

SSBP3-205, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-205ENST00000417664 PSMG3Q9BT73 122 aaPredicted RBP13.66□□□□□ -0.22
SSBP3-205ENST00000417664 TCF19Q9Y242 345 aa13.66□□□□□ -0.22
SSBP3-205ENST00000417664 WASHC3Q9Y3C0 194 aa13.66□□□□□ -0.22
SSBP3-205ENST00000417664 USP24Q9UPU5 2620 aa13.66□□□□□ -0.22
SSBP3-205ENST00000417664 LOC105371242A0A075B767 164 aa13.66□□□□□ -0.22
SSBP3-205ENST00000417664 H7C2Y5 167 aa13.66□□□□□ -0.22
SSBP3-205ENST00000417664 UPK2O00526 184 aa13.66□□□□□ -0.22
SSBP3-205ENST00000417664 PRH1P02810 166 aa13.66□□□□□ -0.22
SSBP3-205ENST00000417664 VDAC2P45880 294 aaPredicted RBP13.66□□□□□ -0.22
SSBP3-205ENST00000417664 CAMLGP49069 296 aa13.66□□□□□ -0.22
SSBP3-205ENST00000417664 OR4A5Q8NH83 315 aa13.66□□□□□ -0.22
SSBP3-205ENST00000417664 HRH4Q9H3N8 390 aa13.66□□□□□ -0.22
SSBP3-205ENST00000417664 PMS2P5A8MQ11 134 aa13.65□□□□□ -0.22
SSBP3-205ENST00000417664 SERF2P84101 59 aa13.65□□□□□ -0.22
SSBP3-205ENST00000417664 OR8G2PQ6IF36 304 aa13.65□□□□□ -0.22
SSBP3-205ENST00000417664 TMEM182Q6ZP80 229 aaPredicted RBP13.65□□□□□ -0.22
SSBP3-205ENST00000417664 C1orf122Q6ZSJ8 110 aa13.65□□□□□ -0.22
SSBP3-205ENST00000417664 CCDC28AQ8IWP9 274 aa13.65□□□□□ -0.22
SSBP3-205ENST00000417664 HARBI1Q96MB7 349 aa13.65□□□□□ -0.22
SSBP3-205ENST00000417664 TMEM147Q9BVK8 224 aa13.65□□□□□ -0.22
SSBP3-205ENST00000417664 HEYLQ9NQ87 328 aaPredicted RBP13.65□□□□□ -0.22
SSBP3-205ENST00000417664 TRAV3A0A0B4J244 114 aa13.64□□□□□ -0.23
SSBP3-205ENST00000417664 C22orf46C9J442 243 aa13.64□□□□□ -0.23
SSBP3-205ENST00000417664 ATP5IP56385 69 aaPredicted RBP13.64□□□□□ -0.23
SSBP3-205ENST00000417664 KIR3DL3Q8N743 410 aa13.64□□□□□ -0.23
SSBP3-205ENST00000417664 OR5B3Q8NH48 314 aa13.64□□□□□ -0.23
SSBP3-205ENST00000417664 GGACTQ9BVM4 153 aa13.64□□□□□ -0.23
SSBP3-205ENST00000417664 WDR61Q9GZS3 305 aaKnown RBP13.64□□□□□ -0.23
SSBP3-205ENST00000417664 ENY2Q9NPA8 101 aa13.64□□□□□ -0.23
SSBP3-205ENST00000417664 CFAP46Q8IYW2 2715 aa13.63□□□□□ -0.23
SSBP3-205ENST00000417664 SRRM4A7MD48 611 aaKnown RBP13.63□□□□□ -0.23
SSBP3-205ENST00000417664 C15orf62A8K5M9 175 aa13.63□□□□□ -0.23
SSBP3-205ENST00000417664 BUB1B-PAK6H3BSN5 160 aa13.63□□□□□ -0.23
SSBP3-205ENST00000417664 KBTBD11O94819 623 aa13.63□□□□□ -0.23
SSBP3-205ENST00000417664 USF1P22415 310 aaPredicted RBP13.63□□□□□ -0.23
SSBP3-205ENST00000417664 LGALS7P47929 136 aa13.63□□□□□ -0.23
SSBP3-205ENST00000417664 HOXA1P49639 335 aaPredicted RBP13.63□□□□□ -0.23
SSBP3-205ENST00000417664 VWC2Q2TAL6 325 aa13.63□□□□□ -0.23
SSBP3-205ENST00000417664 AKR1C8PQ5T2L2 129 aa13.63□□□□□ -0.23
SSBP3-205ENST00000417664 THNSL2Q86YJ6 484 aa13.63□□□□□ -0.23
SSBP3-205ENST00000417664 LFNGQ8NES3 379 aa13.63□□□□□ -0.23
SSBP3-205ENST00000417664 UQCC1Q9NVA1 299 aa13.63□□□□□ -0.23
SSBP3-205ENST00000417664 ONECUT1Q9UBC0 465 aa13.63□□□□□ -0.23
SSBP3-205ENST00000417664 TIMM9Q9Y5J7 89 aa13.63□□□□□ -0.23
SSBP3-205ENST00000417664 OR51B2Q9Y5P1 312 aa13.63□□□□□ -0.23
SSBP3-205ENST00000417664 TSPAN15O95858 294 aa13.63□□□□□ -0.23
SSBP3-205ENST00000417664 IFNA10P01566 189 aa13.63□□□□□ -0.23
SSBP3-205ENST00000417664 SAA1P0DJI8 122 aaPredicted RBP13.63□□□□□ -0.23
SSBP3-205ENST00000417664 RAB11AP62491 216 aa13.63□□□□□ -0.23
SSBP3-205ENST00000417664 ZNF616Q08AN1 781 aa13.63□□□□□ -0.23
SSBP3-205ENST00000417664 CENPVQ7Z7K6 275 aaPredicted RBP13.63□□□□□ -0.23
SSBP3-205ENST00000417664 ZNF843Q8N446 348 aa13.63□□□□□ -0.23
SSBP3-205ENST00000417664 IGFBPL1Q8WX77 278 aa13.63□□□□□ -0.23
SSBP3-205ENST00000417664 TAF15Q92804 592 aaKnown RBP eCLIP13.63□□□□□ -0.236e-7■■■■□ 20.6
SSBP3-205ENST00000417664 BBC3Q96PG8 261 aaPredicted RBP13.63□□□□□ -0.23
SSBP3-205ENST00000417664 HRNRQ86YZ3 2850 aaPredicted RBP13.62□□□□□ -0.23
SSBP3-205ENST00000417664 BTBD17A6NE02 478 aa13.62□□□□□ -0.23
SSBP3-205ENST00000417664 REG1BP48304 166 aa13.62□□□□□ -0.23
SSBP3-205ENST00000417664 RPS16P62249 146 aaKnown RBP13.62□□□□□ -0.23
SSBP3-205ENST00000417664 PRCDQ00LT1 54 aa13.62□□□□□ -0.23
SSBP3-205ENST00000417664 RUNX1Q01196 453 aa13.62□□□□□ -0.23
SSBP3-205ENST00000417664 SPINK9Q5DT21 86 aa13.62□□□□□ -0.23
SSBP3-205ENST00000417664 OR11H6Q8NGC7 330 aa13.62□□□□□ -0.23
SSBP3-205ENST00000417664 LINC00052Q96N35 136 aa13.62□□□□□ -0.23
SSBP3-205ENST00000417664 MS4A7Q9GZW8 240 aaPredicted RBP13.62□□□□□ -0.23
SSBP3-205ENST00000417664 IGHV2-5P01817 119 aa13.61□□□□□ -0.23
SSBP3-205ENST00000417664 PRTN3P24158 256 aa13.61□□□□□ -0.23
SSBP3-205ENST00000417664 Q8N7P7 452 aa13.61□□□□□ -0.23
SSBP3-205ENST00000417664 FAM213BQ8TBF2 198 aa13.61□□□□□ -0.23
SSBP3-205ENST00000417664 TMEM167AQ8TBQ9 72 aa13.61□□□□□ -0.23
SSBP3-205ENST00000417664 UNKLQ9H9P5 680 aaKnown RBP13.61□□□□□ -0.23
SSBP3-205ENST00000417664 INSIG2Q9Y5U4 225 aa13.61□□□□□ -0.23
SSBP3-205ENST00000417664 ENSAO43768 121 aaKnown RBP13.6□□□□□ -0.23
SSBP3-205ENST00000417664 SOX15O60248 233 aa13.6□□□□□ -0.23
SSBP3-205ENST00000417664 NDUFS7O75251 213 aa13.6□□□□□ -0.23
SSBP3-205ENST00000417664 DIAPH2-AS1Q14236 149 aa13.6□□□□□ -0.23
SSBP3-205ENST00000417664 VMA21Q3ZAQ7 101 aa13.6□□□□□ -0.23
SSBP3-205ENST00000417664 BPIFCQ8NFQ6 507 aa13.6□□□□□ -0.23
SSBP3-205ENST00000417664 OR4P4Q8NGL7 312 aa13.6□□□□□ -0.23
SSBP3-205ENST00000417664 RPEQ96AT9 228 aa13.6□□□□□ -0.23
SSBP3-205ENST00000417664 PLEKHA3Q9HB20 300 aa13.6□□□□□ -0.23
SSBP3-205ENST00000417664 KPTNQ9Y664 436 aa13.6□□□□□ -0.23
SSBP3-205ENST00000417664 DOPEY1Q5JWR5 2465 aa13.6□□□□□ -0.23
SSBP3-205ENST00000417664 UBE2L5PA0A1B0GUS4 154 aa13.59□□□□□ -0.23
SSBP3-205ENST00000417664 INS-IGF2F8WCM5 200 aa13.59□□□□□ -0.23
SSBP3-205ENST00000417664 LY6LH3BQJ8 138 aa13.59□□□□□ -0.23
SSBP3-205ENST00000417664 C1QL1O75973 258 aa13.59□□□□□ -0.23
SSBP3-205ENST00000417664 PRB1P04280 392 aa13.59□□□□□ -0.23
SSBP3-205ENST00000417664 RAB2AP61019 212 aa13.59□□□□□ -0.23
SSBP3-205ENST00000417664 RPL8P62917 257 aaKnown RBP13.59□□□□□ -0.23
SSBP3-205ENST00000417664 ETV3LQ6ZN32 361 aa13.59□□□□□ -0.23
SSBP3-205ENST00000417664 RNF5Q99942 180 aa13.59□□□□□ -0.23
SSBP3-205ENST00000417664 IGHV1-3A0A0C4DH29 117 aa13.59□□□□□ -0.23
SSBP3-205ENST00000417664 TMEM218A2RU14 115 aa13.59□□□□□ -0.23
SSBP3-205ENST00000417664 MPDU1O75352 247 aa13.59□□□□□ -0.23
SSBP3-205ENST00000417664 HBE1P02100 147 aa13.59□□□□□ -0.23
SSBP3-205ENST00000417664 MDKP21741 143 aaPredicted RBP13.59□□□□□ -0.23
SSBP3-205ENST00000417664 SNCAP37840 140 aa13.59□□□□□ -0.23
SSBP3-205ENST00000417664 CEACAM3P40198 252 aa13.59□□□□□ -0.23
SSBP3-205ENST00000417664 FHITP49789 147 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms