RNA–Protein interactions for RNA: ENST00000409326.6

PTCD3-202, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 522 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-202ENST00000409326 MMD2Q8IY49 270 aa15.92■□□□□ 0.14
PTCD3-202ENST00000409326 CCDC71LQ8N9Z2 235 aa15.92■□□□□ 0.14
PTCD3-202ENST00000409326 TMEM167AQ8TBQ9 72 aa15.92■□□□□ 0.14
PTCD3-202ENST00000409326 ZNF430Q9H8G1 570 aaPredicted RBP15.92■□□□□ 0.14
PTCD3-202ENST00000409326 BET1LQ9NYM9 111 aa15.92■□□□□ 0.14
PTCD3-202ENST00000409326 COPZ2Q9P299 210 aa15.92■□□□□ 0.14
PTCD3-202ENST00000409326 NUBP2Q9Y5Y2 271 aa15.92■□□□□ 0.14
PTCD3-202ENST00000409326 TCRBV4S1A1TA0A5B7 111 aa15.91■□□□□ 0.14
PTCD3-202ENST00000409326 LPAR6P43657 344 aa15.91■□□□□ 0.14
PTCD3-202ENST00000409326 TMEM267Q0VDI3 215 aaPredicted RBP15.91■□□□□ 0.14
PTCD3-202ENST00000409326 FOXE3Q13461 319 aa15.91■□□□□ 0.14
PTCD3-202ENST00000409326 ZNF57Q68EA5 555 aaPredicted RBP15.91■□□□□ 0.14
PTCD3-202ENST00000409326 OR4A47Q6IF82 309 aa15.91■□□□□ 0.14
PTCD3-202ENST00000409326 MINDY2Q8NBR6 621 aa15.91■□□□□ 0.14
PTCD3-202ENST00000409326 OR4A5Q8NH83 315 aa15.91■□□□□ 0.14
PTCD3-202ENST00000409326 GRPEL2Q8TAA5 225 aa15.91■□□□□ 0.14
PTCD3-202ENST00000409326 R3HDM4Q96D70 268 aa15.91■□□□□ 0.14
PTCD3-202ENST00000409326 GPR132Q9UNW8 380 aa15.91■□□□□ 0.14
PTCD3-202ENST00000409326 C14orf166Q9Y224 244 aaKnown RBP15.91■□□□□ 0.14
PTCD3-202ENST00000409326 TSSC4Q9Y5U2 329 aaPredicted RBP15.91■□□□□ 0.14
PTCD3-202ENST00000409326 ADARB2-AS1A8MUL3 147 aa15.9■□□□□ 0.14
PTCD3-202ENST00000409326 H0Y980 276 aa15.9■□□□□ 0.14
PTCD3-202ENST00000409326 ELANEP08246 267 aa15.9■□□□□ 0.14
PTCD3-202ENST00000409326 INPP1P49441 399 aa15.9■□□□□ 0.14
PTCD3-202ENST00000409326 TNXAQ16473 311 aa15.9■□□□□ 0.14
PTCD3-202ENST00000409326 AKIRIN2Q53H80 203 aa15.9■□□□□ 0.14
PTCD3-202ENST00000409326 PRR31Q5SQ13 230 aa15.9■□□□□ 0.14
PTCD3-202ENST00000409326 RNF152Q8N8N0 203 aa15.9■□□□□ 0.14
PTCD3-202ENST00000409326 RTBDNQ9BSG5 229 aaPredicted RBP15.9■□□□□ 0.14
PTCD3-202ENST00000409326 C5orf66Q9H5L9 145 aa15.9■□□□□ 0.14
PTCD3-202ENST00000409326 MARCH11A6NNE9 402 aa15.89■□□□□ 0.13
PTCD3-202ENST00000409326 ACTL6BO94805 426 aa15.89■□□□□ 0.13
PTCD3-202ENST00000409326 PSMB8P28062 276 aa15.89■□□□□ 0.13
PTCD3-202ENST00000409326 ERVK-16P61578 105 aa15.89■□□□□ 0.13
PTCD3-202ENST00000409326 NSUN5P1Q3KNT7 163 aa15.89■□□□□ 0.13
PTCD3-202ENST00000409326 CXorf66Q5JRM2 361 aaPredicted RBP15.89■□□□□ 0.13
PTCD3-202ENST00000409326 KHDC1LQ5JSQ8 128 aa15.89■□□□□ 0.13
PTCD3-202ENST00000409326 UNQ5815/PRO19632Q6UWF5 114 aa15.89■□□□□ 0.13
PTCD3-202ENST00000409326 LFNGQ8NES3 379 aa15.89■□□□□ 0.13
PTCD3-202ENST00000409326 DMBX1Q8NFW5 382 aa15.89■□□□□ 0.13
PTCD3-202ENST00000409326 SRSF12Q8WXF0 261 aaKnown RBP15.89■□□□□ 0.13
PTCD3-202ENST00000409326 S100ZQ8WXG8 99 aa15.89■□□□□ 0.13
PTCD3-202ENST00000409326 SCGB3A2Q96PL1 93 aa15.89■□□□□ 0.13
PTCD3-202ENST00000409326 TMEM140Q9NV12 185 aa15.89■□□□□ 0.13
PTCD3-202ENST00000409326 FOXA2Q9Y261 457 aaPredicted RBP15.89■□□□□ 0.13
PTCD3-202ENST00000409326 CMYA5Q8N3K9 4069 aa15.89■□□□□ 0.13
PTCD3-202ENST00000409326 A0A1W2PN81 502 aa15.88■□□□□ 0.13
PTCD3-202ENST00000409326 IGLV1-40P01703 118 aa15.88■□□□□ 0.13
PTCD3-202ENST00000409326 IL6RP08887 468 aaPredicted RBP15.88■□□□□ 0.13
PTCD3-202ENST00000409326 IL7P13232 177 aa15.88■□□□□ 0.13
PTCD3-202ENST00000409326 MAS1LP35410 378 aa15.88■□□□□ 0.13
PTCD3-202ENST00000409326 CHRNA7P36544 502 aa15.88■□□□□ 0.13
PTCD3-202ENST00000409326 CADM3Q8N126 398 aa15.88■□□□□ 0.13
PTCD3-202ENST00000409326 TMEM68Q96MH6 324 aa15.88■□□□□ 0.13
PTCD3-202ENST00000409326 TP53RKQ96S44 253 aa15.88■□□□□ 0.13
PTCD3-202ENST00000409326 ZFP57Q9NU63 452 aa15.88■□□□□ 0.13
PTCD3-202ENST00000409326 VSIG4Q9Y279 399 aa15.88■□□□□ 0.13
PTCD3-202ENST00000409326 VWFP04275 2813 aa15.87■□□□□ 0.13
PTCD3-202ENST00000409326 C3orf85A0A1B0GTC6 90 aa15.87■□□□□ 0.13
PTCD3-202ENST00000409326 B3GALNT1O75752 331 aa15.87■□□□□ 0.13
PTCD3-202ENST00000409326 TSPAN15O95858 294 aa15.87■□□□□ 0.13
PTCD3-202ENST00000409326 RPLP1P05386 114 aaKnown RBP15.87■□□□□ 0.13
PTCD3-202ENST00000409326 FGF2P09038 288 aa15.87■□□□□ 0.13
PTCD3-202ENST00000409326 RPA2P15927 270 aa15.87■□□□□ 0.13
PTCD3-202ENST00000409326 RPL23AP62750 156 aaKnown RBP15.87■□□□□ 0.13
PTCD3-202ENST00000409326 RPL8P62917 257 aaKnown RBP15.87■□□□□ 0.13
PTCD3-202ENST00000409326 A0A1W2PRX2 142 aa15.86■□□□□ 0.13
PTCD3-202ENST00000409326 NAP1L6A6NFF2 107 aa15.86■□□□□ 0.13
PTCD3-202ENST00000409326 UPK2O00526 184 aa15.86■□□□□ 0.13
PTCD3-202ENST00000409326 SOX15O60248 233 aa15.86■□□□□ 0.13
PTCD3-202ENST00000409326 KRASP01116 189 aa15.86■□□□□ 0.13
PTCD3-202ENST00000409326 IGKV1-39P01597 117 aa15.86■□□□□ 0.13
PTCD3-202ENST00000409326 IGKV1D-39P04432 117 aa15.86■□□□□ 0.13
PTCD3-202ENST00000409326 SERPINE2P07093 398 aa15.86■□□□□ 0.13
PTCD3-202ENST00000409326 G6PCP35575 357 aa15.86■□□□□ 0.13
PTCD3-202ENST00000409326 C10orf55Q5SWW7 151 aa15.86■□□□□ 0.13
PTCD3-202ENST00000409326 ASPHD1Q5U4P2 390 aa15.86■□□□□ 0.13
PTCD3-202ENST00000409326 LCNL1Q6ZST4 164 aa15.86■□□□□ 0.13
PTCD3-202ENST00000409326 OR5M8Q8NGP6 311 aa15.86■□□□□ 0.13
PTCD3-202ENST00000409326 PHB2Q99623 299 aa15.86■□□□□ 0.13
PTCD3-202ENST00000409326 CCDC32Q9BV29 185 aa15.86■□□□□ 0.13
PTCD3-202ENST00000409326 NAA60Q9H7X0 242 aa15.86■□□□□ 0.13
PTCD3-202ENST00000409326 PKD1L1Q8TDX9 2849 aa15.85■□□□□ 0.13
PTCD3-202ENST00000409326 TRAV3A0A0B4J244 114 aa15.85■□□□□ 0.13
PTCD3-202ENST00000409326 MSGN1A6NI15 193 aa15.85■□□□□ 0.13
PTCD3-202ENST00000409326 CRYM-AS1A6NIL9 109 aa15.85■□□□□ 0.13
PTCD3-202ENST00000409326 HLA-GP17693 338 aa15.85■□□□□ 0.13
PTCD3-202ENST00000409326 UCP1P25874 307 aa15.85■□□□□ 0.13
PTCD3-202ENST00000409326 RPL27AP46776 148 aaKnown RBP15.85■□□□□ 0.13
PTCD3-202ENST00000409326 TMEM65Q6PI78 240 aa15.85■□□□□ 0.13
PTCD3-202ENST00000409326 MYOZ3Q8TDC0 251 aa15.85■□□□□ 0.13
PTCD3-202ENST00000409326 SEC22AQ96IW7 307 aa15.85■□□□□ 0.13
PTCD3-202ENST00000409326 SPIN2AQ99865 258 aa15.85■□□□□ 0.13
PTCD3-202ENST00000409326 SPIN2BQ9BPZ2 258 aa15.85■□□□□ 0.13
PTCD3-202ENST00000409326 SLC25A21Q9BQT8 299 aaPredicted RBP15.85■□□□□ 0.13
PTCD3-202ENST00000409326 C7orf50Q9BRJ6 194 aaKnown RBP15.85■□□□□ 0.13
PTCD3-202ENST00000409326 TEX13DA0A0J9YY54 714 aaPredicted RBP15.84■□□□□ 0.13
PTCD3-202ENST00000409326 OR5AC1P0C628 307 aa15.84■□□□□ 0.13
PTCD3-202ENST00000409326 PF4V1P10720 104 aa15.84■□□□□ 0.13
PTCD3-202ENST00000409326 SP6Q3SY56 376 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms