RNA–Protein interactions for RNA: ENST00000407449.5

PIKFYVE-204, Transcript of phosphoinositide kinase, FYVE-type zinc finger containing, humanhuman

TSL 1 (best) BASIC

Gene PIKFYVE, Length 1,898 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIKFYVE-204ENST00000407449 IFNA1P01562 189 aa13.59□□□□□ -0.23
PIKFYVE-204ENST00000407449 FGF8P55075 233 aaPredicted RBP13.59□□□□□ -0.23
PIKFYVE-204ENST00000407449 FLI1Q01543 452 aaPredicted RBP13.59□□□□□ -0.23
PIKFYVE-204ENST00000407449 PMS2P11Q13670 270 aa13.59□□□□□ -0.23
PIKFYVE-204ENST00000407449 FFAR4Q5NUL3 377 aa13.59□□□□□ -0.23
PIKFYVE-204ENST00000407449 RPP25LQ8N5L8 163 aaKnown RBP13.59□□□□□ -0.23
PIKFYVE-204ENST00000407449 CYB561D1Q8N8Q1 229 aa13.59□□□□□ -0.23
PIKFYVE-204ENST00000407449 LINC01560Q8TB33 94 aa13.59□□□□□ -0.23
PIKFYVE-204ENST00000407449 C20orf24Q9BUV8 137 aa13.59□□□□□ -0.23
PIKFYVE-204ENST00000407449 TUBA4BQ9H853 241 aa13.59□□□□□ -0.23
PIKFYVE-204ENST00000407449 SLC39A9Q9NUM3 307 aa13.59□□□□□ -0.23
PIKFYVE-204ENST00000407449 CTSZQ9UBR2 303 aa13.59□□□□□ -0.23
PIKFYVE-204ENST00000407449 CTXND1A0A1B0GTU2 59 aa13.58□□□□□ -0.24
PIKFYVE-204ENST00000407449 NDUFA2O43678 99 aa13.58□□□□□ -0.24
PIKFYVE-204ENST00000407449 AKR1C3P42330 323 aa13.58□□□□□ -0.24
PIKFYVE-204ENST00000407449 HSPE1P61604 102 aaKnown RBP13.58□□□□□ -0.24
PIKFYVE-204ENST00000407449 FAM122CQ6P4D5 195 aa13.58□□□□□ -0.24
PIKFYVE-204ENST00000407449 PUS1Q9Y606 427 aaKnown RBP eCLIP13.58□□□□□ -0.24
PIKFYVE-204ENST00000407449 ZFP92A6NM28 416 aa13.57□□□□□ -0.24
PIKFYVE-204ENST00000407449 COLCA2A8K830 154 aa13.57□□□□□ -0.24
PIKFYVE-204ENST00000407449 PRSS46E5RG02 174 aa13.57□□□□□ -0.24
PIKFYVE-204ENST00000407449 DVL1O14640 695 aa13.57□□□□□ -0.24
PIKFYVE-204ENST00000407449 SOX15O60248 233 aa13.57□□□□□ -0.24
PIKFYVE-204ENST00000407449 PLAUP00749 431 aa13.57□□□□□ -0.24
PIKFYVE-204ENST00000407449 LOXP28300 417 aaPredicted RBP13.57□□□□□ -0.24
PIKFYVE-204ENST00000407449 CD1BP29016 333 aa13.57□□□□□ -0.24
PIKFYVE-204ENST00000407449 RAB11AP62491 216 aa13.57□□□□□ -0.24
PIKFYVE-204ENST00000407449 DLK1P80370 383 aa13.57□□□□□ -0.24
PIKFYVE-204ENST00000407449 C8orf31Q8N9H6 132 aa13.57□□□□□ -0.24
PIKFYVE-204ENST00000407449 OR10G9Q8NGN4 311 aa13.57□□□□□ -0.24
PIKFYVE-204ENST00000407449 OR10G7Q8NGN6 311 aa13.57□□□□□ -0.24
PIKFYVE-204ENST00000407449 OR13D1Q8NGV5 346 aa13.57□□□□□ -0.24
PIKFYVE-204ENST00000407449 LHX4Q969G2 390 aa13.57□□□□□ -0.24
PIKFYVE-204ENST00000407449 ZNRD1Q9P1U0 126 aa13.57□□□□□ -0.24
PIKFYVE-204ENST00000407449 PRNDQ9UKY0 176 aa13.57□□□□□ -0.24
PIKFYVE-204ENST00000407449 H3BQ15 152 aa13.57□□□□□ -0.24
PIKFYVE-204ENST00000407449 RRHO14718 337 aa13.57□□□□□ -0.24
PIKFYVE-204ENST00000407449 MPDU1O75352 247 aa13.57□□□□□ -0.24
PIKFYVE-204ENST00000407449 IL6RP08887 468 aaPredicted RBP13.57□□□□□ -0.24
PIKFYVE-204ENST00000407449 FBP1P09467 338 aa13.57□□□□□ -0.24
PIKFYVE-204ENST00000407449 ERVFRD-1P60508 538 aa13.57□□□□□ -0.24
PIKFYVE-204ENST00000407449 HNF4GQ14541 408 aa13.57□□□□□ -0.24
PIKFYVE-204ENST00000407449 FAM71F2Q6NXP2 309 aa13.57□□□□□ -0.24
PIKFYVE-204ENST00000407449 P2RX4Q99571 388 aa13.57□□□□□ -0.24
PIKFYVE-204ENST00000407449 ACTR3CQ9C0K3 210 aaPredicted RBP13.57□□□□□ -0.24
PIKFYVE-204ENST00000407449 ARFGEF3Q5TH69 2177 aa13.56□□□□□ -0.24
PIKFYVE-204ENST00000407449 APOA2P02652 100 aa13.56□□□□□ -0.24
PIKFYVE-204ENST00000407449 GRNP28799 593 aaKnown RBP13.56□□□□□ -0.24
PIKFYVE-204ENST00000407449 CEBPGP53567 150 aa13.56□□□□□ -0.24
PIKFYVE-204ENST00000407449 AVPI1Q5T686 147 aa13.56□□□□□ -0.24
PIKFYVE-204ENST00000407449 LINC00311Q8N616 119 aa13.56□□□□□ -0.24
PIKFYVE-204ENST00000407449 ZNF596Q8TC21 504 aa13.56□□□□□ -0.24
PIKFYVE-204ENST00000407449 SLC25A22Q9H936 323 aa13.56□□□□□ -0.24
PIKFYVE-204ENST00000407449 ENY2Q9NPA8 101 aa13.56□□□□□ -0.24
PIKFYVE-204ENST00000407449 MLXQ9UH92 298 aa13.56□□□□□ -0.24
PIKFYVE-204ENST00000407449 VAX2Q9UIW0 290 aa13.56□□□□□ -0.24
PIKFYVE-204ENST00000407449 ZNF257Q9Y2Q1 563 aa13.56□□□□□ -0.24
PIKFYVE-204ENST00000407449 UPK2O00526 184 aa13.55□□□□□ -0.24
PIKFYVE-204ENST00000407449 DLX6P56179 175 aa13.55□□□□□ -0.24
PIKFYVE-204ENST00000407449 ADORA2A-AS1P86434 159 aa13.55□□□□□ -0.24
PIKFYVE-204ENST00000407449 ACOT6Q3I5F7 207 aaPredicted RBP13.55□□□□□ -0.24
PIKFYVE-204ENST00000407449 Q8N7P7 452 aa13.55□□□□□ -0.24
PIKFYVE-204ENST00000407449 TMEM170AQ8WVE7 144 aa13.55□□□□□ -0.24
PIKFYVE-204ENST00000407449 MRPL20Q9BYC9 149 aaKnown RBP13.55□□□□□ -0.24
PIKFYVE-204ENST00000407449 OR51B2Q9Y5P1 312 aa13.55□□□□□ -0.24
PIKFYVE-204ENST00000407449 SIAH2O43255 324 aa13.55□□□□□ -0.24
PIKFYVE-204ENST00000407449 FOLR2P14207 255 aa13.55□□□□□ -0.24
PIKFYVE-204ENST00000407449 NPY1RP25929 384 aa13.55□□□□□ -0.24
PIKFYVE-204ENST00000407449 ZNF672Q499Z4 452 aaPredicted RBP13.55□□□□□ -0.24
PIKFYVE-204ENST00000407449 TMEM155Q4W5P6 130 aa13.55□□□□□ -0.24
PIKFYVE-204ENST00000407449 RBMS3Q6XE24 437 aaKnown RBP13.55□□□□□ -0.24
PIKFYVE-204ENST00000407449 ABHD12Q8N2K0 398 aa13.55□□□□□ -0.24
PIKFYVE-204ENST00000407449 MUC15Q8N387 334 aa13.55□□□□□ -0.24
PIKFYVE-204ENST00000407449 SLC24A4Q8NFF2 622 aa13.55□□□□□ -0.24
PIKFYVE-204ENST00000407449 OSR1Q8TAX0 266 aaPredicted RBP13.55□□□□□ -0.24
PIKFYVE-204ENST00000407449 NIPSNAP3BQ9BS92 247 aa13.55□□□□□ -0.24
PIKFYVE-204ENST00000407449 BET1LQ9NYM9 111 aa13.55□□□□□ -0.24
PIKFYVE-204ENST00000407449 POLEQ07864 2286 aa13.54□□□□□ -0.24
PIKFYVE-204ENST00000407449 IGF2RP11717 2491 aa13.54□□□□□ -0.24
PIKFYVE-204ENST00000407449 SMCO3A2RU48 225 aa13.54□□□□□ -0.24
PIKFYVE-204ENST00000407449 IGKV1-16P04430 117 aa13.54□□□□□ -0.24
PIKFYVE-204ENST00000407449 SMUG1Q53HV7 270 aa13.54□□□□□ -0.24
PIKFYVE-204ENST00000407449 FAM90A2PQ658T7 463 aa13.54□□□□□ -0.24
PIKFYVE-204ENST00000407449 SLC35E3Q7Z769 313 aa13.54□□□□□ -0.24
PIKFYVE-204ENST00000407449 CA5BP1Q8WTZ4 195 aa13.54□□□□□ -0.24
PIKFYVE-204ENST00000407449 HIST1H2BAQ96A08 127 aa13.54□□□□□ -0.24
PIKFYVE-204ENST00000407449 TVP23CQ96ET8 276 aa13.54□□□□□ -0.24
PIKFYVE-204ENST00000407449 A0A087X0M5 115 aa13.53□□□□□ -0.24
PIKFYVE-204ENST00000407449 TRBV23-1A0A0A0MS06 115 aa13.53□□□□□ -0.24
PIKFYVE-204ENST00000407449 A0A1B0GX30 115 aa13.53□□□□□ -0.24
PIKFYVE-204ENST00000407449 J3QR06 171 aa13.53□□□□□ -0.24
PIKFYVE-204ENST00000407449 CYB5BO43169 146 aa13.53□□□□□ -0.24
PIKFYVE-204ENST00000407449 KBTBD11O94819 623 aa13.53□□□□□ -0.24
PIKFYVE-204ENST00000407449 IFNA4P05014 189 aa13.53□□□□□ -0.24
PIKFYVE-204ENST00000407449 TAGLN2P37802 199 aaKnown RBP13.53□□□□□ -0.24
PIKFYVE-204ENST00000407449 PRCDQ00LT1 54 aa13.53□□□□□ -0.24
PIKFYVE-204ENST00000407449 TREML4Q6UXN2 200 aa13.53□□□□□ -0.24
PIKFYVE-204ENST00000407449 OR5AN1Q8NGI8 311 aa13.53□□□□□ -0.24
PIKFYVE-204ENST00000407449 OR10X1Q8NGY0 326 aa13.53□□□□□ -0.24
PIKFYVE-204ENST00000407449 TMEM186Q96B77 213 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms