RNA–Protein interactions for RNA: ENST00000400301.5

USP48-204, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 1 (best) BASIC

Gene USP48, Length 4,309 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-204ENST00000400301 OR1B1Q8NGR6 318 aa15.53■□□□□ 0.08
USP48-204ENST00000400301 RNF2Q99496 336 aa15.53■□□□□ 0.08
USP48-204ENST00000400301 IL19Q9UHD0 177 aa15.53■□□□□ 0.08
USP48-204ENST00000400301 RPL30P62888 115 aaKnown RBP15.53■□□□□ 0.08
USP48-204ENST00000400301 SRP14P37108 136 aaKnown RBP15.52■□□□□ 0.08
USP48-204ENST00000400301 C20orf202A1L168 122 aa15.52■□□□□ 0.08
USP48-204ENST00000400301 KIR2DL2P43627 348 aaPredicted RBP15.52■□□□□ 0.08
USP48-204ENST00000400301 GGACTQ9BVM4 153 aa15.52■□□□□ 0.08
USP48-204ENST00000400301 C19orf67A6NJJ6 358 aa15.52■□□□□ 0.07
USP48-204ENST00000400301 H0Y8G0 127 aa15.52■□□□□ 0.07
USP48-204ENST00000400301 CT45A10P0DMU9 189 aa15.52■□□□□ 0.07
USP48-204ENST00000400301 AGAP20933 346 aa15.52■□□□□ 0.07
USP48-204ENST00000400301 CCKARP32238 428 aa15.52■□□□□ 0.07
USP48-204ENST00000400301 MRPL54Q6P161 138 aaKnown RBP15.52■□□□□ 0.07
USP48-204ENST00000400301 COA4Q9NYJ1 87 aa15.52■□□□□ 0.07
USP48-204ENST00000400301 HSPB7Q9UBY9 170 aa15.52■□□□□ 0.07
USP48-204ENST00000400301 IGHV3-72A0A0B4J1Y9 119 aa15.52■□□□□ 0.07
USP48-204ENST00000400301 SNURFLB1AK76 121 aa15.52■□□□□ 0.07
USP48-204ENST00000400301 TMEM50AO95807 157 aa15.52■□□□□ 0.07
USP48-204ENST00000400301 ARSJQ5FYB0 599 aaPredicted RBP15.52■□□□□ 0.07
USP48-204ENST00000400301 OR1L6Q8NGR2 347 aa15.52■□□□□ 0.07
USP48-204ENST00000400301 RPL8P62917 257 aaKnown RBP15.51■□□□□ 0.07
USP48-204ENST00000400301 FAM216BQ8N7L0 139 aa15.51■□□□□ 0.07
USP48-204ENST00000400301 OR1P1Q8NH06 330 aa15.51■□□□□ 0.07
USP48-204ENST00000400301 SFXN3Q9BWM7 321 aa15.51■□□□□ 0.07
USP48-204ENST00000400301 MBD3L1Q8WWY6 194 aa15.51■□□□□ 0.07
USP48-204ENST00000400301 SEBOXQ9HB31 216 aaPredicted RBP15.51■□□□□ 0.07
USP48-204ENST00000400301 INSIG2Q9Y5U4 225 aa15.51■□□□□ 0.07
USP48-204ENST00000400301 IGHV1-18A0A0C4DH31 117 aa15.51■□□□□ 0.07
USP48-204ENST00000400301 ZNF729A6NN14 1252 aaPredicted RBP15.51■□□□□ 0.07
USP48-204ENST00000400301 CDX4O14627 284 aaPredicted RBP15.51■□□□□ 0.07
USP48-204ENST00000400301 PPIHO43447 177 aaKnown RBP15.51■□□□□ 0.07
USP48-204ENST00000400301 CEACAM1P13688 526 aa15.51■□□□□ 0.07
USP48-204ENST00000400301 CAMPP49913 170 aa15.51■□□□□ 0.07
USP48-204ENST00000400301 SRD5A3Q9H8P0 318 aa15.51■□□□□ 0.07
USP48-204ENST00000400301 C10orf113Q5VZT2 155 aa15.5■□□□□ 0.07
USP48-204ENST00000400301 PDPNQ86YL7 162 aa15.5■□□□□ 0.07
USP48-204ENST00000400301 STPG3Q8N7X2 389 aa15.5■□□□□ 0.07
USP48-204ENST00000400301 CA2P00918 260 aa15.5■□□□□ 0.07
USP48-204ENST00000400301 AMTP48728 403 aa15.5■□□□□ 0.07
USP48-204ENST00000400301 PAX5Q02548 391 aa15.5■□□□□ 0.07
USP48-204ENST00000400301 HEPN1Q6WQI6 88 aa15.5■□□□□ 0.07
USP48-204ENST00000400301 PARD6AQ9NPB6 346 aa15.5■□□□□ 0.07
USP48-204ENST00000400301 METRNQ9UJH8 293 aa15.5■□□□□ 0.07
USP48-204ENST00000400301 IGHV3-21A0A0B4J1V1 117 aa15.5■□□□□ 0.07
USP48-204ENST00000400301 ZNF253O75346 499 aa15.5■□□□□ 0.07
USP48-204ENST00000400301 ELOBQ15370 118 aa15.5■□□□□ 0.07
USP48-204ENST00000400301 WDR73Q6P4I2 378 aa15.5■□□□□ 0.07
USP48-204ENST00000400301 DTX1Q86Y01 620 aa15.5■□□□□ 0.07
USP48-204ENST00000400301 A0A1W2PRD5 423 aa15.49■□□□□ 0.07
USP48-204ENST00000400301 A0A1W2PRF3 423 aa15.49■□□□□ 0.07
USP48-204ENST00000400301 A0A1W2PRM7 423 aa15.49■□□□□ 0.07
USP48-204ENST00000400301 FOLR2P14207 255 aa15.49■□□□□ 0.07
USP48-204ENST00000400301 CSN1S1P47710 185 aa15.49■□□□□ 0.07
USP48-204ENST00000400301 SLC35B1P78383 322 aa15.49■□□□□ 0.07
USP48-204ENST00000400301 SRSF6Q13247 344 aaKnown RBP15.49■□□□□ 0.07
USP48-204ENST00000400301 VAMP8Q9BV40 100 aa15.49■□□□□ 0.07
USP48-204ENST00000400301 TRBV23-1A0A0A0MS06 115 aa15.49■□□□□ 0.07
USP48-204ENST00000400301 LYZP61626 148 aa15.49■□□□□ 0.07
USP48-204ENST00000400301 SPNS3Q6ZMD2 512 aa15.49■□□□□ 0.07
USP48-204ENST00000400301 DIRC2Q96SL1 478 aa15.49■□□□□ 0.07
USP48-204ENST00000400301 A0A1B0GW64 132 aa15.49■□□□□ 0.07
USP48-204ENST00000400301 LINC00869P0C866 280 aa15.49■□□□□ 0.07
USP48-204ENST00000400301 MORN2Q502X0 79 aa15.49■□□□□ 0.07
USP48-204ENST00000400301 LRP11Q86VZ4 500 aa15.49■□□□□ 0.07
USP48-204ENST00000400301 HOXA5P20719 270 aa15.49■□□□□ 0.07
USP48-204ENST00000400301 ATP5G3P48201 142 aa15.49■□□□□ 0.07
USP48-204ENST00000400301 AKAP6Q13023 2319 aa15.49■□□□□ 0.07
USP48-204ENST00000400301 PEAR1Q5VY43 1037 aaPredicted RBP15.49■□□□□ 0.07
USP48-204ENST00000400301 OR4A47Q6IF82 309 aa15.49■□□□□ 0.07
USP48-204ENST00000400301 S100A7P31151 101 aa15.48■□□□□ 0.07
USP48-204ENST00000400301 RANP62826 216 aaKnown RBP15.48■□□□□ 0.07
USP48-204ENST00000400301 PQLC2Q6ZP29 291 aa15.48■□□□□ 0.07
USP48-204ENST00000400301 ASCL5Q7RTU5 278 aa15.48■□□□□ 0.07
USP48-204ENST00000400301 AP1S3Q96PC3 154 aa15.48■□□□□ 0.07
USP48-204ENST00000400301 ABCA1O95477 2261 aa15.48■□□□□ 0.07
USP48-204ENST00000400301 KBTBD11-OT1A0A1B0GTJ5 212 aa15.48■□□□□ 0.07
USP48-204ENST00000400301 DUTP33316 252 aaKnown RBP15.48■□□□□ 0.07
USP48-204ENST00000400301 RPL29P47914 159 aaKnown RBP15.48■□□□□ 0.07
USP48-204ENST00000400301 PKIAP61925 76 aa15.48■□□□□ 0.07
USP48-204ENST00000400301 SPSB3Q6PJ21 355 aa15.48■□□□□ 0.07
USP48-204ENST00000400301 RPP25LQ8N5L8 163 aaKnown RBP15.48■□□□□ 0.07
USP48-204ENST00000400301 WDR31Q8NA23 367 aa15.48■□□□□ 0.07
USP48-204ENST00000400301 BPTFQ12830 3046 aa15.48■□□□□ 0.07
USP48-204ENST00000400301 WNK2Q9Y3S1 2297 aa15.48■□□□□ 0.07
USP48-204ENST00000400301 IL6RP08887 468 aaPredicted RBP15.48■□□□□ 0.07
USP48-204ENST00000400301 GCHFRP30047 84 aa15.48■□□□□ 0.07
USP48-204ENST00000400301 RPL23P62829 140 aaKnown RBP15.48■□□□□ 0.07
USP48-204ENST00000400301 ABCA4P78363 2273 aa15.47■□□□□ 0.07
USP48-204ENST00000400301 C5orf52A6NGY3 159 aa15.47■□□□□ 0.07
USP48-204ENST00000400301 NCBP2LA6PVI3 153 aaKnown RBP15.47■□□□□ 0.07
USP48-204ENST00000400301 C10orf142B7Z368 130 aa15.47■□□□□ 0.07
USP48-204ENST00000400301 MLNRO43193 412 aa15.47■□□□□ 0.07
USP48-204ENST00000400301 CD40P25942 277 aa15.47■□□□□ 0.07
USP48-204ENST00000400301 ARL16Q0P5N6 197 aa15.47■□□□□ 0.07
USP48-204ENST00000400301 NABP2Q9BQ15 211 aa15.47■□□□□ 0.07
USP48-204ENST00000400301 TRAV1-1A0A0B4J248 108 aa15.47■□□□□ 0.07
USP48-204ENST00000400301 YPEL1O60688 119 aa15.47■□□□□ 0.07
USP48-204ENST00000400301 VENTXO95231 258 aa15.47■□□□□ 0.07
USP48-204ENST00000400301 PLAUP00749 431 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms