RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 COMMD9Q9P000 198 aa16.58■□□□□ 0.24
TSPAN4-206ENST00000397408 FOXA2Q9Y261 457 aaPredicted RBP16.58■□□□□ 0.24
TSPAN4-206ENST00000397408 ACTL6BO94805 426 aa16.57■□□□□ 0.24
TSPAN4-206ENST00000397408 PSMB8P28062 276 aa16.57■□□□□ 0.24
TSPAN4-206ENST00000397408 PIGPP57054 158 aa16.57■□□□□ 0.24
TSPAN4-206ENST00000397408 RND3P61587 244 aa16.57■□□□□ 0.24
TSPAN4-206ENST00000397408 KLF9Q13886 244 aaPredicted RBP16.57■□□□□ 0.24
TSPAN4-206ENST00000397408 TOMM5Q8N4H5 51 aa16.57■□□□□ 0.24
TSPAN4-206ENST00000397408 RNF152Q8N8N0 203 aa16.57■□□□□ 0.24
TSPAN4-206ENST00000397408 OR51S1Q8NGJ8 323 aa16.57■□□□□ 0.24
TSPAN4-206ENST00000397408 TMEM167AQ8TBQ9 72 aa16.57■□□□□ 0.24
TSPAN4-206ENST00000397408 AIFM2Q9BRQ8 373 aa16.57■□□□□ 0.24
TSPAN4-206ENST00000397408 MCUBQ9NWR8 336 aa16.57■□□□□ 0.24
TSPAN4-206ENST00000397408 SOX15O60248 233 aa16.56■□□□□ 0.24
TSPAN4-206ENST00000397408 IGLV1-40P01703 118 aa16.56■□□□□ 0.24
TSPAN4-206ENST00000397408 PF4V1P10720 104 aa16.56■□□□□ 0.24
TSPAN4-206ENST00000397408 LPAR6P43657 344 aa16.56■□□□□ 0.24
TSPAN4-206ENST00000397408 AP3S2P59780 193 aa16.56■□□□□ 0.24
TSPAN4-206ENST00000397408 AKIRIN2Q53H80 203 aa16.56■□□□□ 0.24
TSPAN4-206ENST00000397408 OR4A47Q6IF82 309 aa16.56■□□□□ 0.24
TSPAN4-206ENST00000397408 ZFAND1Q8TCF1 268 aa16.56■□□□□ 0.24
TSPAN4-206ENST00000397408 SRSF12Q8WXF0 261 aaKnown RBP16.56■□□□□ 0.24
TSPAN4-206ENST00000397408 ZFP57Q9NU63 452 aa16.56■□□□□ 0.24
TSPAN4-206ENST00000397408 SLC2A8Q9NY64 477 aa16.56■□□□□ 0.24
TSPAN4-206ENST00000397408 NUDT19A8MXV4 375 aa16.55■□□□□ 0.24
TSPAN4-206ENST00000397408 RPA2P15927 270 aa16.55■□□□□ 0.24
TSPAN4-206ENST00000397408 FAUP35544 74 aaKnown RBP16.55■□□□□ 0.24
TSPAN4-206ENST00000397408 ECI1P42126 302 aa16.55■□□□□ 0.24
TSPAN4-206ENST00000397408 ERVK-16P61578 105 aa16.55■□□□□ 0.24
TSPAN4-206ENST00000397408 POU2AF1Q16633 256 aa16.55■□□□□ 0.24
TSPAN4-206ENST00000397408 CNPY1Q3B7I2 92 aa16.55■□□□□ 0.24
TSPAN4-206ENST00000397408 ZNF585BQ52M93 769 aa16.55■□□□□ 0.24
TSPAN4-206ENST00000397408 C10orf55Q5SWW7 151 aa16.55■□□□□ 0.24
TSPAN4-206ENST00000397408 TMEM65Q6PI78 240 aa16.55■□□□□ 0.24
TSPAN4-206ENST00000397408 C18orf65Q6ZTR6 163 aa16.55■□□□□ 0.24
TSPAN4-206ENST00000397408 KLHL30-AS1Q8NEE0 82 aa16.55■□□□□ 0.24
TSPAN4-206ENST00000397408 DMBX1Q8NFW5 382 aa16.55■□□□□ 0.24
TSPAN4-206ENST00000397408 PHB2Q99623 299 aa16.55■□□□□ 0.24
TSPAN4-206ENST00000397408 KLK15Q9H2R5 256 aa16.55■□□□□ 0.24
TSPAN4-206ENST00000397408 HRASLSQ9HDD0 168 aa16.55■□□□□ 0.24
TSPAN4-206ENST00000397408 BET1LQ9NYM9 111 aa16.55■□□□□ 0.24
TSPAN4-206ENST00000397408 SCP2D1Q9UJQ7 156 aa16.55■□□□□ 0.24
TSPAN4-206ENST00000397408 MPPED1O15442 326 aa16.54■□□□□ 0.24
TSPAN4-206ENST00000397408 CTSDP07339 412 aaPredicted RBP16.54■□□□□ 0.24
TSPAN4-206ENST00000397408 CCDC71LQ8N9Z2 235 aa16.54■□□□□ 0.24
TSPAN4-206ENST00000397408 OR4A5Q8NH83 315 aa16.54■□□□□ 0.24
TSPAN4-206ENST00000397408 CASTOR1Q8WTX7 329 aa16.54■□□□□ 0.24
TSPAN4-206ENST00000397408 FAM212BQ9NTI7 297 aaPredicted RBP16.54■□□□□ 0.24
TSPAN4-206ENST00000397408 TMEM140Q9NV12 185 aa16.54■□□□□ 0.24
TSPAN4-206ENST00000397408 COPZ2Q9P299 210 aa16.54■□□□□ 0.24
TSPAN4-206ENST00000397408 NBEAL1Q6ZS30 2694 aa16.54■□□□□ 0.24
TSPAN4-206ENST00000397408 FBN3Q75N90 2809 aa16.54■□□□□ 0.24
TSPAN4-206ENST00000397408 MSGN1A6NI15 193 aa16.53■□□□□ 0.24
TSPAN4-206ENST00000397408 MARCH11A6NNE9 402 aa16.53■□□□□ 0.24
TSPAN4-206ENST00000397408 APELAP0DMC3 54 aa16.53■□□□□ 0.24
TSPAN4-206ENST00000397408 SURF2Q15527 256 aaPredicted RBP16.53■□□□□ 0.24
TSPAN4-206ENST00000397408 ASPHD1Q5U4P2 390 aa16.53■□□□□ 0.24
TSPAN4-206ENST00000397408 GDPD1Q8N9F7 314 aa16.53■□□□□ 0.24
TSPAN4-206ENST00000397408 OR5M8Q8NGP6 311 aa16.53■□□□□ 0.24
TSPAN4-206ENST00000397408 C14orf166Q9Y224 244 aaKnown RBP16.53■□□□□ 0.24
TSPAN4-206ENST00000397408 RPL8P62917 257 aaKnown RBP16.53■□□□□ 0.24
TSPAN4-206ENST00000397408 TRIQKQ629K1 86 aa16.53■□□□□ 0.24
TSPAN4-206ENST00000397408 C8orf86Q6ZUL3 223 aa16.53■□□□□ 0.24
TSPAN4-206ENST00000397408 ZNF695Q8IW36 515 aa16.53■□□□□ 0.24
TSPAN4-206ENST00000397408 OR5T1Q8NG75 326 aa16.53■□□□□ 0.24
TSPAN4-206ENST00000397408 MYOZ3Q8TDC0 251 aa16.53■□□□□ 0.24
TSPAN4-206ENST00000397408 TRAV3A0A0B4J244 114 aa16.52■□□□□ 0.23
TSPAN4-206ENST00000397408 H0Y980 276 aa16.52■□□□□ 0.23
TSPAN4-206ENST00000397408 KRASP01116 189 aa16.52■□□□□ 0.23
TSPAN4-206ENST00000397408 MAS1LP35410 378 aa16.52■□□□□ 0.23
TSPAN4-206ENST00000397408 G6PCP35575 357 aa16.52■□□□□ 0.23
TSPAN4-206ENST00000397408 RPL27AP46776 148 aaKnown RBP16.52■□□□□ 0.23
TSPAN4-206ENST00000397408 CDX1P47902 265 aaPredicted RBP16.52■□□□□ 0.23
TSPAN4-206ENST00000397408 RAB9AP51151 201 aa16.52■□□□□ 0.23
TSPAN4-206ENST00000397408 BAK1Q16611 211 aa16.52■□□□□ 0.23
TSPAN4-206ENST00000397408 ZNF57Q68EA5 555 aaPredicted RBP16.52■□□□□ 0.23
TSPAN4-206ENST00000397408 TMEM68Q96MH6 324 aa16.52■□□□□ 0.23
TSPAN4-206ENST00000397408 SPIN2AQ99865 258 aa16.52■□□□□ 0.23
TSPAN4-206ENST00000397408 SPIN2BQ9BPZ2 258 aa16.52■□□□□ 0.23
TSPAN4-206ENST00000397408 C5orf66Q9H5L9 145 aa16.52■□□□□ 0.23
TSPAN4-206ENST00000397408 BATF3Q9NR55 127 aa16.52■□□□□ 0.23
TSPAN4-206ENST00000397408 CMYA5Q8N3K9 4069 aa16.51■□□□□ 0.23
TSPAN4-206ENST00000397408 UPK2O00526 184 aa16.51■□□□□ 0.23
TSPAN4-206ENST00000397408 PF4P02776 101 aa16.51■□□□□ 0.23
TSPAN4-206ENST00000397408 SERPINE2P07093 398 aa16.51■□□□□ 0.23
TSPAN4-206ENST00000397408 MYOD1P15172 320 aa16.51■□□□□ 0.23
TSPAN4-206ENST00000397408 HLA-GP17693 338 aa16.51■□□□□ 0.23
TSPAN4-206ENST00000397408 CD40LGP29965 261 aa16.51■□□□□ 0.23
TSPAN4-206ENST00000397408 SLC6A1P30531 599 aa16.51■□□□□ 0.23
TSPAN4-206ENST00000397408 INPP1P49441 399 aa16.51■□□□□ 0.23
TSPAN4-206ENST00000397408 ZNF45Q02386 682 aa16.51■□□□□ 0.23
TSPAN4-206ENST00000397408 TP53RKQ96S44 253 aa16.51■□□□□ 0.23
TSPAN4-206ENST00000397408 SDHCQ99643 169 aaPredicted RBP16.51■□□□□ 0.23
TSPAN4-206ENST00000397408 RTBDNQ9BSG5 229 aaPredicted RBP16.51■□□□□ 0.23
TSPAN4-206ENST00000397408 GPR132Q9UNW8 380 aa16.51■□□□□ 0.23
TSPAN4-206ENST00000397408 C3orf85A0A1B0GTC6 90 aa16.5■□□□□ 0.23
TSPAN4-206ENST00000397408 IL6RP08887 468 aaPredicted RBP16.5■□□□□ 0.23
TSPAN4-206ENST00000397408 KIAA0141Q14154 515 aaPredicted RBP16.5■□□□□ 0.23
TSPAN4-206ENST00000397408 ZNF491Q8N8L2 437 aa16.5■□□□□ 0.23
TSPAN4-206ENST00000397408 DEDD2Q8WXF8 326 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms