RNA–Protein interactions for RNA: ENST00000396521.3

EXOSC3-202, Transcript of exosome component 3, humanhuman

TSL 2 BASIC

Gene EXOSC3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-202ENST00000396521 ALMS1Q8TCU4 4167 aa13.1□□□□□ -0.31
EXOSC3-202ENST00000396521 LINC00473A8K010 186 aa13.1□□□□□ -0.31
EXOSC3-202ENST00000396521 CD36P16671 472 aa13.1□□□□□ -0.31
EXOSC3-202ENST00000396521 GALP22466 123 aa13.1□□□□□ -0.31
EXOSC3-202ENST00000396521 ARL3P36405 182 aa13.1□□□□□ -0.31
EXOSC3-202ENST00000396521 ARFRP1Q13795 201 aa13.1□□□□□ -0.31
EXOSC3-202ENST00000396521 TMEM91Q6ZNR0 172 aa13.1□□□□□ -0.31
EXOSC3-202ENST00000396521 ZNF645Q8N7E2 425 aa13.1□□□□□ -0.31
EXOSC3-202ENST00000396521 UXS1Q8NBZ7 420 aa13.1□□□□□ -0.31
EXOSC3-202ENST00000396521 OR10R2Q8NGX6 335 aa13.1□□□□□ -0.31
EXOSC3-202ENST00000396521 EEF1AKMT3Q96AZ1 226 aa13.1□□□□□ -0.31
EXOSC3-202ENST00000396521 AIFM2Q9BRQ8 373 aa13.1□□□□□ -0.31
EXOSC3-202ENST00000396521 TRBV7-1A0A0A6YYK4 115 aa13.09□□□□□ -0.31
EXOSC3-202ENST00000396521 ZNF320A2RRD8 509 aa13.09□□□□□ -0.31
EXOSC3-202ENST00000396521 TMEM213A2RRL7 107 aa13.09□□□□□ -0.31
EXOSC3-202ENST00000396521 METTL21EPA6NDL7 271 aa13.09□□□□□ -0.31
EXOSC3-202ENST00000396521 FCGR3BO75015 233 aa13.09□□□□□ -0.31
EXOSC3-202ENST00000396521 CRYGCP07315 174 aa13.09□□□□□ -0.31
EXOSC3-202ENST00000396521 PSMB6P28072 239 aa13.09□□□□□ -0.31
EXOSC3-202ENST00000396521 ELLP55199 621 aaPredicted RBP13.09□□□□□ -0.31
EXOSC3-202ENST00000396521 MLLT11Q13015 90 aaPredicted RBP13.09□□□□□ -0.31
EXOSC3-202ENST00000396521 RBPMS2Q6ZRY4 209 aaKnown RBP13.09□□□□□ -0.31
EXOSC3-202ENST00000396521 KCTD9Q7L273 389 aa13.09□□□□□ -0.31
EXOSC3-202ENST00000396521 SLC38A6Q8IZM9 456 aa13.09□□□□□ -0.31
EXOSC3-202ENST00000396521 FCGR1BQ92637 280 aa13.09□□□□□ -0.31
EXOSC3-202ENST00000396521 CXorf58Q96LI9 332 aa13.09□□□□□ -0.31
EXOSC3-202ENST00000396521 FYTTD1Q96QD9 318 aaKnown RBP13.09□□□□□ -0.31
EXOSC3-202ENST00000396521 OR2A7Q96R45 310 aa13.09□□□□□ -0.31
EXOSC3-202ENST00000396521 VCX3AQ9NNX9 186 aa13.09□□□□□ -0.31
EXOSC3-202ENST00000396521 ACOT13Q9NPJ3 140 aa13.09□□□□□ -0.31
EXOSC3-202ENST00000396521 TMEM272A0A1B0GTI8 110 aa13.08□□□□□ -0.32
EXOSC3-202ENST00000396521 TEX22C9J3V5 150 aa13.08□□□□□ -0.32
EXOSC3-202ENST00000396521 MFNGO00587 321 aa13.08□□□□□ -0.32
EXOSC3-202ENST00000396521 HLA-AP01891 365 aaKnown RBP13.08□□□□□ -0.32
EXOSC3-202ENST00000396521 HIST1H1DP16402 221 aaKnown RBP13.08□□□□□ -0.32
EXOSC3-202ENST00000396521 RAB6AP20340 208 aa13.08□□□□□ -0.32
EXOSC3-202ENST00000396521 DTYMKP23919 212 aa13.08□□□□□ -0.32
EXOSC3-202ENST00000396521 CALRP27797 417 aaKnown RBP13.08□□□□□ -0.32
EXOSC3-202ENST00000396521 PSMB9P28065 219 aa13.08□□□□□ -0.32
EXOSC3-202ENST00000396521 RPL27AP46776 148 aaKnown RBP13.08□□□□□ -0.32
EXOSC3-202ENST00000396521 CLDN12P56749 244 aa13.08□□□□□ -0.32
EXOSC3-202ENST00000396521 TM4SF20Q53R12 229 aa13.08□□□□□ -0.32
EXOSC3-202ENST00000396521 CLEC19AQ6UXS0 136 aa13.08□□□□□ -0.32
EXOSC3-202ENST00000396521 OR1L6Q8NGR2 347 aa13.08□□□□□ -0.32
EXOSC3-202ENST00000396521 OR4S2Q8NH73 311 aa13.08□□□□□ -0.32
EXOSC3-202ENST00000396521 HSD17B10Q99714 261 aaKnown RBP13.08□□□□□ -0.32
EXOSC3-202ENST00000396521 MRPL27Q9P0M9 148 aaKnown RBP13.08□□□□□ -0.32
EXOSC3-202ENST00000396521 MLXQ9UH92 298 aa13.08□□□□□ -0.32
EXOSC3-202ENST00000396521 OR2W1Q9Y3N9 320 aa13.08□□□□□ -0.32
EXOSC3-202ENST00000396521 KIR2DL5BA0A0G2JN68 375 aa13.07□□□□□ -0.32
EXOSC3-202ENST00000396521 KIR2DL5BA0A0G2JPC4 375 aa13.07□□□□□ -0.32
EXOSC3-202ENST00000396521 RAB27BO00194 218 aa13.07□□□□□ -0.32
EXOSC3-202ENST00000396521 PDCD5O14737 125 aa13.07□□□□□ -0.32
EXOSC3-202ENST00000396521 SPRY2O43597 315 aa13.07□□□□□ -0.32
EXOSC3-202ENST00000396521 KBTBD11O94819 623 aa13.07□□□□□ -0.32
EXOSC3-202ENST00000396521 ZNF735P0CB33 412 aa13.07□□□□□ -0.32
EXOSC3-202ENST00000396521 C8orf88P0DMB2 117 aa13.07□□□□□ -0.32
EXOSC3-202ENST00000396521 MYOD1P15172 320 aa13.07□□□□□ -0.32
EXOSC3-202ENST00000396521 GNB3P16520 340 aa13.07□□□□□ -0.32
EXOSC3-202ENST00000396521 PMS2P11Q13670 270 aa13.07□□□□□ -0.32
EXOSC3-202ENST00000396521 C10orf55Q5SWW7 151 aa13.07□□□□□ -0.32
EXOSC3-202ENST00000396521 SPARTQ8N0X7 666 aa13.07□□□□□ -0.32
EXOSC3-202ENST00000396521 KIR2DL5AQ8N109 375 aa13.07□□□□□ -0.32
EXOSC3-202ENST00000396521 KIR2DL5BQ8NHK3 375 aa13.07□□□□□ -0.32
EXOSC3-202ENST00000396521 TMEM167AQ8TBQ9 72 aa13.07□□□□□ -0.32
EXOSC3-202ENST00000396521 CCDC140Q96MF4 163 aa13.07□□□□□ -0.32
EXOSC3-202ENST00000396521 FANCD2OSQ96PS1 177 aa13.07□□□□□ -0.32
EXOSC3-202ENST00000396521 MGLLQ99685 303 aa13.07□□□□□ -0.32
EXOSC3-202ENST00000396521 KRTAP17-1Q9BYP8 105 aa13.07□□□□□ -0.32
EXOSC3-202ENST00000396521 UFC1Q9Y3C8 167 aa13.07□□□□□ -0.32
EXOSC3-202ENST00000396521 A0A0J9YWU9 116 aa13.06□□□□□ -0.32
EXOSC3-202ENST00000396521 SCAF4O95104 1147 aaKnown RBP13.06□□□□□ -0.32
EXOSC3-202ENST00000396521 HRASP01112 189 aa13.06□□□□□ -0.32
EXOSC3-202ENST00000396521 HLA-DQB1P01920 261 aa13.06□□□□□ -0.32
EXOSC3-202ENST00000396521 DEFA4P12838 97 aa13.06□□□□□ -0.32
EXOSC3-202ENST00000396521 LYG2Q86SG7 212 aa13.06□□□□□ -0.32
EXOSC3-202ENST00000396521 OR2C3Q8N628 320 aa13.06□□□□□ -0.32
EXOSC3-202ENST00000396521 CACNG8Q8WXS5 425 aa13.06□□□□□ -0.32
EXOSC3-202ENST00000396521 SPAG8Q99932 426 aaPredicted RBP13.06□□□□□ -0.32
EXOSC3-202ENST00000396521 C5orf66Q9H5L9 145 aa13.06□□□□□ -0.32
EXOSC3-202ENST00000396521 RBMX2Q9Y388 322 aaKnown RBP13.06□□□□□ -0.32
EXOSC3-202ENST00000396521 A0A087WXM4 84 aa13.05□□□□□ -0.32
EXOSC3-202ENST00000396521 HMX3A6NHT5 357 aa13.05□□□□□ -0.32
EXOSC3-202ENST00000396521 IL6RP08887 468 aaPredicted RBP13.05□□□□□ -0.32
EXOSC3-202ENST00000396521 CTRB1P17538 263 aa13.05□□□□□ -0.32
EXOSC3-202ENST00000396521 NEDD8Q15843 81 aa13.05□□□□□ -0.32
EXOSC3-202ENST00000396521 CTRB2Q6GPI1 263 aa13.05□□□□□ -0.32
EXOSC3-202ENST00000396521 PUSL1Q8N0Z8 303 aaKnown RBP13.05□□□□□ -0.32
EXOSC3-202ENST00000396521 STPG3Q8N7X2 389 aa13.05□□□□□ -0.32
EXOSC3-202ENST00000396521 TSPAN14Q8NG11 270 aa13.05□□□□□ -0.32
EXOSC3-202ENST00000396521 DCSTAMPQ9H295 470 aa13.05□□□□□ -0.32
EXOSC3-202ENST00000396521 THYN1Q9P016 225 aa13.05□□□□□ -0.32
EXOSC3-202ENST00000396521 TRAV1-2A0A0B4J238 106 aa13.04□□□□□ -0.32
EXOSC3-202ENST00000396521 CYB5BO43169 146 aa13.04□□□□□ -0.32
EXOSC3-202ENST00000396521 CLEC3BP05452 202 aa13.04□□□□□ -0.32
EXOSC3-202ENST00000396521 RPS25P62851 125 aaKnown RBP13.04□□□□□ -0.32
EXOSC3-202ENST00000396521 RPL8P62917 257 aaKnown RBP13.04□□□□□ -0.32
EXOSC3-202ENST00000396521 HES5Q5TA89 166 aa13.04□□□□□ -0.32
EXOSC3-202ENST00000396521 UBE2UQ5VVX9 321 aa13.04□□□□□ -0.32
EXOSC3-202ENST00000396521 LAMTOR1Q6IAA8 161 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms