RNA–Protein interactions for RNA: ENST00000393120.6

MKS1-203, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 1,926 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-203ENST00000393120 DLK1P80370 383 aa11.72□□□□□ -0.53
MKS1-203ENST00000393120 FFAR4Q5NUL3 377 aa11.72□□□□□ -0.53
MKS1-203ENST00000393120 TMEM200BQ69YZ2 307 aa11.72□□□□□ -0.53
MKS1-203ENST00000393120 ZNF833PQ6ZTB9 187 aa11.72□□□□□ -0.53
MKS1-203ENST00000393120 Q8N7P7 452 aa11.72□□□□□ -0.53
MKS1-203ENST00000393120 CCL17Q92583 94 aa11.72□□□□□ -0.53
MKS1-203ENST00000393120 RAB39BQ96DA2 213 aa11.72□□□□□ -0.53
MKS1-203ENST00000393120 TVP23CQ96ET8 276 aa11.72□□□□□ -0.53
MKS1-203ENST00000393120 ZNF714Q96N38 554 aa11.72□□□□□ -0.53
MKS1-203ENST00000393120 ZNF257Q9Y2Q1 563 aa11.72□□□□□ -0.53
MKS1-203ENST00000393120 PLCE1Q9P212 2302 aa11.71□□□□□ -0.53
MKS1-203ENST00000393120 NDUFB3O43676 98 aa11.71□□□□□ -0.53
MKS1-203ENST00000393120 NDUFA2O43678 99 aa11.71□□□□□ -0.53
MKS1-203ENST00000393120 FCN3O75636 299 aa11.71□□□□□ -0.53
MKS1-203ENST00000393120 CD3EP07766 207 aa11.71□□□□□ -0.53
MKS1-203ENST00000393120 RAB13P51153 203 aa11.71□□□□□ -0.53
MKS1-203ENST00000393120 RAB11AP62491 216 aa11.71□□□□□ -0.53
MKS1-203ENST00000393120 RTL8BQ17RB0 113 aa11.71□□□□□ -0.53
MKS1-203ENST00000393120 TMEM249Q2WGJ8 235 aa11.71□□□□□ -0.53
MKS1-203ENST00000393120 LRRC10Q5BKY1 277 aa11.71□□□□□ -0.53
MKS1-203ENST00000393120 FAM90A2PQ658T7 463 aa11.71□□□□□ -0.53
MKS1-203ENST00000393120 ZNF596Q8TC21 504 aa11.71□□□□□ -0.53
MKS1-203ENST00000393120 DYNLRB1Q9NP97 96 aa11.71□□□□□ -0.53
MKS1-203ENST00000393120 PRNDQ9UKY0 176 aa11.71□□□□□ -0.53
MKS1-203ENST00000393120 B4DEV8 164 aa11.7□□□□□ -0.54
MKS1-203ENST00000393120 RRHO14718 337 aa11.7□□□□□ -0.54
MKS1-203ENST00000393120 CYB5BO43169 146 aa11.7□□□□□ -0.54
MKS1-203ENST00000393120 RPS16P62249 146 aaKnown RBP11.7□□□□□ -0.54
MKS1-203ENST00000393120 ACOT6Q3I5F7 207 aaPredicted RBP11.7□□□□□ -0.54
MKS1-203ENST00000393120 ST6GALNAC3Q8NDV1 305 aa11.7□□□□□ -0.54
MKS1-203ENST00000393120 YPEL4Q96NS1 127 aa11.7□□□□□ -0.54
MKS1-203ENST00000393120 CXorf65A6NEN9 183 aa11.7□□□□□ -0.54
MKS1-203ENST00000393120 SEC14L6B5MCN3 397 aa11.7□□□□□ -0.54
MKS1-203ENST00000393120 HOXA1P49639 335 aaPredicted RBP11.7□□□□□ -0.54
MKS1-203ENST00000393120 PNRC1Q12796 327 aaPredicted RBP11.7□□□□□ -0.54
MKS1-203ENST00000393120 FAM71F2Q6NXP2 309 aa11.7□□□□□ -0.54
MKS1-203ENST00000393120 LINC00311Q8N616 119 aa11.7□□□□□ -0.54
MKS1-203ENST00000393120 TMEM170AQ8WVE7 144 aa11.7□□□□□ -0.54
MKS1-203ENST00000393120 MALSU1Q96EH3 234 aa11.7□□□□□ -0.54
MKS1-203ENST00000393120 SLC35D1Q9NTN3 355 aa11.7□□□□□ -0.54
MKS1-203ENST00000393120 RAXQ9Y2V3 346 aa11.7□□□□□ -0.54
MKS1-203ENST00000393120 RAI1Q7Z5J4 1906 aaPredicted RBP11.7□□□□□ -0.54
MKS1-203ENST00000393120 UPK2O00526 184 aa11.69□□□□□ -0.54
MKS1-203ENST00000393120 FSTL3O95633 263 aa11.69□□□□□ -0.54
MKS1-203ENST00000393120 CHRNB4P30926 498 aa11.69□□□□□ -0.54
MKS1-203ENST00000393120 OPRK1P41145 380 aa11.69□□□□□ -0.54
MKS1-203ENST00000393120 CEBPGP53567 150 aa11.69□□□□□ -0.54
MKS1-203ENST00000393120 ATP5IP56385 69 aaPredicted RBP11.69□□□□□ -0.54
MKS1-203ENST00000393120 KLRB1Q12918 225 aa11.69□□□□□ -0.54
MKS1-203ENST00000393120 ABHD12Q8N2K0 398 aa11.69□□□□□ -0.54
MKS1-203ENST00000393120 OR13D1Q8NGV5 346 aa11.69□□□□□ -0.54
MKS1-203ENST00000393120 RAB24Q969Q5 203 aa11.69□□□□□ -0.54
MKS1-203ENST00000393120 SIRT7Q9NRC8 400 aa11.69□□□□□ -0.54
MKS1-203ENST00000393120 KLF2Q9Y5W3 355 aaPredicted RBP11.69□□□□□ -0.54
MKS1-203ENST00000393120 TANC2Q9HCD6 1990 aa11.69□□□□□ -0.54
MKS1-203ENST00000393120 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.68□□□□□ -0.54
MKS1-203ENST00000393120 A0A1W2PPE2 198 aa11.68□□□□□ -0.54
MKS1-203ENST00000393120 A0A1W2PPH5 198 aa11.68□□□□□ -0.54
MKS1-203ENST00000393120 FNDC10F2Z333 226 aa11.68□□□□□ -0.54
MKS1-203ENST00000393120 OR2C1O95371 312 aa11.68□□□□□ -0.54
MKS1-203ENST00000393120 LYPD2Q6UXB3 125 aa11.68□□□□□ -0.54
MKS1-203ENST00000393120 TREML4Q6UXN2 200 aa11.68□□□□□ -0.54
MKS1-203ENST00000393120 OR5AN1Q8NGI8 311 aa11.68□□□□□ -0.54
MKS1-203ENST00000393120 OSR1Q8TAX0 266 aaPredicted RBP11.68□□□□□ -0.54
MKS1-203ENST00000393120 NEUROG1Q92886 237 aa11.68□□□□□ -0.54
MKS1-203ENST00000393120 RAB1CQ92928 201 aa11.68□□□□□ -0.54
MKS1-203ENST00000393120 ISOC2Q96AB3 205 aa11.68□□□□□ -0.54
MKS1-203ENST00000393120 ENY2Q9NPA8 101 aa11.68□□□□□ -0.54
MKS1-203ENST00000393120 MANBALQ9NQG1 85 aa11.68□□□□□ -0.54
MKS1-203ENST00000393120 BIN3Q9NQY0 253 aa11.68□□□□□ -0.54
MKS1-203ENST00000393120 FKBP11Q9NYL4 201 aa11.68□□□□□ -0.54
MKS1-203ENST00000393120 BET1LQ9NYM9 111 aa11.68□□□□□ -0.54
MKS1-203ENST00000393120 OR51B2Q9Y5P1 312 aa11.68□□□□□ -0.54
MKS1-203ENST00000393120 RP1L1Q8IWN7 2480 aaPredicted RBP11.68□□□□□ -0.54
MKS1-203ENST00000393120 BOD1L1Q8NFC6 3051 aa11.68□□□□□ -0.54
MKS1-203ENST00000393120 A0A087X0M5 115 aa11.68□□□□□ -0.54
MKS1-203ENST00000393120 IGHV1-69-2A0A0G2JMI3 117 aa11.68□□□□□ -0.54
MKS1-203ENST00000393120 A0A1B0GX30 115 aa11.68□□□□□ -0.54
MKS1-203ENST00000393120 C1orf196B1AJZ1 125 aa11.68□□□□□ -0.54
MKS1-203ENST00000393120 TMEM250H0YL14 139 aa11.68□□□□□ -0.54
MKS1-203ENST00000393120 TSPAN9O75954 239 aa11.68□□□□□ -0.54
MKS1-203ENST00000393120 CCL3L1P16619 93 aa11.68□□□□□ -0.54
MKS1-203ENST00000393120 RAB5AP20339 215 aa11.68□□□□□ -0.54
MKS1-203ENST00000393120 AGAP20933 346 aa11.68□□□□□ -0.54
MKS1-203ENST00000393120 NPY1RP25929 384 aa11.68□□□□□ -0.54
MKS1-203ENST00000393120 PSMB3P49720 205 aa11.68□□□□□ -0.54
MKS1-203ENST00000393120 RAB5BP61020 215 aa11.68□□□□□ -0.54
MKS1-203ENST00000393120 MEF2BQ02080 365 aaPredicted RBP11.68□□□□□ -0.54
MKS1-203ENST00000393120 SLC24A4Q8NFF2 622 aa11.68□□□□□ -0.54
MKS1-203ENST00000393120 SLC25A22Q9H936 323 aa11.68□□□□□ -0.54
MKS1-203ENST00000393120 NPVFQ9HCQ7 196 aa11.68□□□□□ -0.54
MKS1-203ENST00000393120 CTSZQ9UBR2 303 aa11.68□□□□□ -0.54
MKS1-203ENST00000393120 LSM4Q9Y4Z0 139 aaKnown RBP11.68□□□□□ -0.54
MKS1-203ENST00000393120 DIDO1Q9BTC0 2240 aaKnown RBP11.67□□□□□ -0.54
MKS1-203ENST00000393120 SRRM4A7MD48 611 aaKnown RBP11.67□□□□□ -0.54
MKS1-203ENST00000393120 DVL1O14640 695 aa11.67□□□□□ -0.54
MKS1-203ENST00000393120 KBTBD11O94819 623 aa11.67□□□□□ -0.54
MKS1-203ENST00000393120 IGKV1-16P04430 117 aa11.67□□□□□ -0.54
MKS1-203ENST00000393120 IFNA4P05014 189 aa11.67□□□□□ -0.54
MKS1-203ENST00000393120 LOXP28300 417 aaPredicted RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms