RNA–Protein interactions for RNA: ENST00000389195.6

LTN1-203, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 2,714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-203ENST00000389195 RNASEK-C17orf49H0YIS7 233 aa8.26□□□□□ -1.09
LTN1-203ENST00000389195 SHOXO15266 292 aa8.26□□□□□ -1.09
LTN1-203ENST00000389195 MSMO1Q15800 293 aa8.26□□□□□ -1.09
LTN1-203ENST00000389195 TRAT1Q6PIZ9 186 aa8.26□□□□□ -1.09
LTN1-203ENST00000389195 LHFPL4Q7Z7J7 247 aa8.26□□□□□ -1.09
LTN1-203ENST00000389195 PUSL1Q8N0Z8 303 aaKnown RBP8.26□□□□□ -1.09
LTN1-203ENST00000389195 C17orf50Q8WW18 174 aa8.26□□□□□ -1.09
LTN1-203ENST00000389195 UQCC1Q9NVA1 299 aa8.26□□□□□ -1.09
LTN1-203ENST00000389195 DOPEY2Q9Y3R5 2298 aa8.25□□□□□ -1.09
LTN1-203ENST00000389195 SNRPCP09234 159 aaKnown RBP8.25□□□□□ -1.09
LTN1-203ENST00000389195 SFTA3P0C7M3 94 aa8.25□□□□□ -1.09
LTN1-203ENST00000389195 IGHV1-8P0DP01 117 aa8.25□□□□□ -1.09
LTN1-203ENST00000389195 NQO2P16083 231 aa8.25□□□□□ -1.09
LTN1-203ENST00000389195 ZNF266Q14584 549 aa8.25□□□□□ -1.09
LTN1-203ENST00000389195 ZNF726P1Q15940 193 aa8.25□□□□□ -1.09
LTN1-203ENST00000389195 CBLN2Q8IUK8 224 aa8.25□□□□□ -1.09
LTN1-203ENST00000389195 MMP26Q9NRE1 261 aa8.25□□□□□ -1.09
LTN1-203ENST00000389195 ZFP57Q9NU63 452 aa8.25□□□□□ -1.09
LTN1-203ENST00000389195 HILPDAQ9Y5L2 63 aa8.25□□□□□ -1.09
LTN1-203ENST00000389195 IGHV3-21A0A0B4J1V1 117 aa8.25□□□□□ -1.09
LTN1-203ENST00000389195 C15orf62A8K5M9 175 aa8.25□□□□□ -1.09
LTN1-203ENST00000389195 PMS2P5A8MQ11 134 aa8.25□□□□□ -1.09
LTN1-203ENST00000389195 J3QR06 171 aa8.25□□□□□ -1.09
LTN1-203ENST00000389195 SEC11BP0C7V7 166 aa8.25□□□□□ -1.09
LTN1-203ENST00000389195 SAA1P0DJI8 122 aaPredicted RBP8.25□□□□□ -1.09
LTN1-203ENST00000389195 NPBWR1P48145 328 aa8.25□□□□□ -1.09
LTN1-203ENST00000389195 RAB13P51153 203 aa8.25□□□□□ -1.09
LTN1-203ENST00000389195 RAB2AP61019 212 aa8.25□□□□□ -1.09
LTN1-203ENST00000389195 IQCF2Q8IXL9 164 aa8.25□□□□□ -1.09
LTN1-203ENST00000389195 GATAD1Q8WUU5 269 aa8.25□□□□□ -1.09
LTN1-203ENST00000389195 TSNAXQ99598 290 aaKnown RBP8.25□□□□□ -1.09
LTN1-203ENST00000389195 GAL3ST2Q9H3Q3 398 aa8.25□□□□□ -1.09
LTN1-203ENST00000389195 ABCA2Q9BZC7 2435 aa8.25□□□□□ -1.09
LTN1-203ENST00000389195 UBR5O95071 2799 aaPredicted RBP8.24□□□□□ -1.09
LTN1-203ENST00000389195 TEX15Q9BXT5 2789 aa8.24□□□□□ -1.09
LTN1-203ENST00000389195 PPIAL4CA0A0B4J2A2 164 aa8.24□□□□□ -1.09
LTN1-203ENST00000389195 IGHV2-70P01814 119 aa8.24□□□□□ -1.09
LTN1-203ENST00000389195 PPIAL4GP0DN37 164 aa8.24□□□□□ -1.09
LTN1-203ENST00000389195 GATA2P23769 480 aaPredicted RBP8.24□□□□□ -1.09
LTN1-203ENST00000389195 HOXA1P49639 335 aaPredicted RBP8.24□□□□□ -1.09
LTN1-203ENST00000389195 DLX6P56179 175 aa8.24□□□□□ -1.09
LTN1-203ENST00000389195 ERVK-16P61578 105 aa8.24□□□□□ -1.09
LTN1-203ENST00000389195 BAXQ07812 192 aa8.24□□□□□ -1.09
LTN1-203ENST00000389195 EIF5AL1Q6IS14 154 aaKnown RBP8.24□□□□□ -1.09
LTN1-203ENST00000389195 SCGB1C1Q8TD33 95 aa8.24□□□□□ -1.09
LTN1-203ENST00000389195 CORO2AQ92828 525 aa8.24□□□□□ -1.09
LTN1-203ENST00000389195 TMEM204Q9BSN7 226 aa8.24□□□□□ -1.09
LTN1-203ENST00000389195 STRAPQ9Y3F4 350 aaKnown RBP8.24□□□□□ -1.09
LTN1-203ENST00000389195 MXRA5Q9NR99 2828 aa8.24□□□□□ -1.09
LTN1-203ENST00000389195 IFNA5P01569 189 aa8.24□□□□□ -1.09
LTN1-203ENST00000389195 IFNA4P05014 189 aa8.24□□□□□ -1.09
LTN1-203ENST00000389195 ZFP36P26651 326 aaKnown RBP8.24□□□□□ -1.09
LTN1-203ENST00000389195 SNCAP37840 140 aa8.24□□□□□ -1.09
LTN1-203ENST00000389195 LCN2P80188 198 aa8.24□□□□□ -1.09
LTN1-203ENST00000389195 TMEM155Q4W5P6 130 aa8.24□□□□□ -1.09
LTN1-203ENST00000389195 ACSM6Q6P461 480 aa8.24□□□□□ -1.09
LTN1-203ENST00000389195 SPSB3Q6PJ21 355 aa8.24□□□□□ -1.09
LTN1-203ENST00000389195 TMEM14EPQ6UXP3 125 aa8.24□□□□□ -1.09
LTN1-203ENST00000389195 OR4S2Q8NH73 311 aa8.24□□□□□ -1.09
LTN1-203ENST00000389195 SSMEM1Q8WWF3 244 aa8.24□□□□□ -1.09
LTN1-203ENST00000389195 HARBI1Q96MB7 349 aa8.24□□□□□ -1.09
LTN1-203ENST00000389195 SLC25A22Q9H936 323 aa8.24□□□□□ -1.09
LTN1-203ENST00000389195 PATZ1Q9HBE1 687 aaKnown RBP8.24□□□□□ -1.09
LTN1-203ENST00000389195 CBLN4Q9NTU7 201 aa8.24□□□□□ -1.09
LTN1-203ENST00000389195 MED9Q9NWA0 146 aa8.24□□□□□ -1.09
LTN1-203ENST00000389195 TCF19Q9Y242 345 aa8.24□□□□□ -1.09
LTN1-203ENST00000389195 ZFP92A6NM28 416 aa8.23□□□□□ -1.09
LTN1-203ENST00000389195 SLC25A17O43808 307 aa8.23□□□□□ -1.09
LTN1-203ENST00000389195 H2AFB1P0C5Y9 115 aa8.23□□□□□ -1.09
LTN1-203ENST00000389195 SLC25A6P12236 298 aa8.23□□□□□ -1.09
LTN1-203ENST00000389195 FGF7P21781 194 aa8.23□□□□□ -1.09
LTN1-203ENST00000389195 COL8A1P27658 744 aa8.23□□□□□ -1.09
LTN1-203ENST00000389195 RAB7AP51149 207 aa8.23□□□□□ -1.09
LTN1-203ENST00000389195 F2RL1P55085 397 aa8.23□□□□□ -1.09
LTN1-203ENST00000389195 TAS2R30P59541 319 aa8.23□□□□□ -1.09
LTN1-203ENST00000389195 EIF5AP63241 154 aaKnown RBP8.23□□□□□ -1.09
LTN1-203ENST00000389195 GUK1Q16774 197 aa8.23□□□□□ -1.09
LTN1-203ENST00000389195 AKR1C8PQ5T2L2 129 aa8.23□□□□□ -1.09
LTN1-203ENST00000389195 WDR25Q64LD2 544 aaPredicted RBP8.23□□□□□ -1.09
LTN1-203ENST00000389195 RUSC1-AS1Q66K80 236 aa8.23□□□□□ -1.09
LTN1-203ENST00000389195 SCRT1Q9BWW7 348 aa8.23□□□□□ -1.09
LTN1-203ENST00000389195 PARP11Q9NR21 331 aa8.23□□□□□ -1.09
LTN1-203ENST00000389195 HELZ2Q9BYK8 2649 aaKnown RBP8.23□□□□□ -1.09
LTN1-203ENST00000389195 H0YJW9 148 aa8.23□□□□□ -1.09
LTN1-203ENST00000389195 PRB4P10163 310 aaPredicted RBP8.23□□□□□ -1.09
LTN1-203ENST00000389195 C11orf71Q6IPW1 123 aa8.23□□□□□ -1.09
LTN1-203ENST00000389195 RPP25LQ8N5L8 163 aaKnown RBP8.23□□□□□ -1.09
LTN1-203ENST00000389195 OR10P1Q8NGE3 313 aa8.23□□□□□ -1.09
LTN1-203ENST00000389195 WDR61Q9GZS3 305 aaKnown RBP8.23□□□□□ -1.09
LTN1-203ENST00000389195 RAB1BQ9H0U4 201 aa8.23□□□□□ -1.09
LTN1-203ENST00000389195 OR51B2Q9Y5P1 312 aa8.23□□□□□ -1.09
LTN1-203ENST00000389195 NAV2Q8IVL1 2488 aa8.23□□□□□ -1.09
LTN1-203ENST00000389195 IGHV3OR16-10A0A075B7F0 116 aa8.23□□□□□ -1.09
LTN1-203ENST00000389195 KRBOX1C9JBD0 128 aa8.23□□□□□ -1.09
LTN1-203ENST00000389195 C4orf17Q53FE4 359 aa8.23□□□□□ -1.09
LTN1-203ENST00000389195 RXFP4Q8TDU9 374 aa8.23□□□□□ -1.09
LTN1-203ENST00000389195 TAF15Q92804 592 aaKnown RBP eCLIP8.23□□□□□ -1.09
LTN1-203ENST00000389195 SAT2Q96F10 170 aaPredicted RBP8.23□□□□□ -1.09
LTN1-203ENST00000389195 GNG13Q9P2W3 67 aa8.23□□□□□ -1.09
LTN1-203ENST00000389195 APCP25054 2843 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms