RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 ADAM5Q6NVV9 412 aa9.95□□□□□ -0.82
HMGCL-202ENST00000374487 SSX8Q7RTT4 187 aa9.95□□□□□ -0.82
HMGCL-202ENST00000374487 ZFP82Q8N141 532 aa9.95□□□□□ -0.82
HMGCL-202ENST00000374487 ZCCHC24Q8N2G6 241 aaKnown RBP9.95□□□□□ -0.82
HMGCL-202ENST00000374487 LHX4Q969G2 390 aa9.95□□□□□ -0.82
HMGCL-202ENST00000374487 HIST1H2BAQ96A08 127 aa9.95□□□□□ -0.82
HMGCL-202ENST00000374487 MAP1LC3BQ9GZQ8 125 aa9.95□□□□□ -0.82
HMGCL-202ENST00000374487 HEYLQ9NQ87 328 aaPredicted RBP9.95□□□□□ -0.82
HMGCL-202ENST00000374487 GAB2Q9UQC2 676 aa9.95□□□□□ -0.82
HMGCL-202ENST00000374487 PRELID1Q9Y255 219 aa9.95□□□□□ -0.82
HMGCL-202ENST00000374487 SAA2-SAA4A0A096LPE2 208 aa9.95□□□□□ -0.82
HMGCL-202ENST00000374487 NKX6-3A6NJ46 265 aa9.95□□□□□ -0.82
HMGCL-202ENST00000374487 ZNF729A6NN14 1252 aaPredicted RBP9.95□□□□□ -0.82
HMGCL-202ENST00000374487 IFNA1P01562 189 aa9.95□□□□□ -0.82
HMGCL-202ENST00000374487 THBDP07204 575 aa9.95□□□□□ -0.82
HMGCL-202ENST00000374487 SAA2P0DJI9 122 aaPredicted RBP9.95□□□□□ -0.82
HMGCL-202ENST00000374487 TAGLN2P37802 199 aaKnown RBP9.95□□□□□ -0.82
HMGCL-202ENST00000374487 GNG10P50151 68 aa9.95□□□□□ -0.82
HMGCL-202ENST00000374487 MRPS11P82912 194 aaKnown RBP9.95□□□□□ -0.82
HMGCL-202ENST00000374487 TEX36Q5VZQ5 186 aa9.95□□□□□ -0.82
HMGCL-202ENST00000374487 SSX7Q7RTT5 188 aa9.95□□□□□ -0.82
HMGCL-202ENST00000374487 CENPVQ7Z7K6 275 aaPredicted RBP9.95□□□□□ -0.82
HMGCL-202ENST00000374487 RPP25LQ8N5L8 163 aaKnown RBP9.95□□□□□ -0.82
HMGCL-202ENST00000374487 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.95□□□□□ -0.82
HMGCL-202ENST00000374487 LINC01560Q8TB33 94 aa9.95□□□□□ -0.82
HMGCL-202ENST00000374487 EGLN1Q9GZT9 426 aa9.95□□□□□ -0.82
HMGCL-202ENST00000374487 TMEM140Q9NV12 185 aa9.95□□□□□ -0.82
HMGCL-202ENST00000374487 DCAF16Q9NXF7 216 aa9.95□□□□□ -0.82
HMGCL-202ENST00000374487 IDI2-AS1Q9NZ38 188 aa9.95□□□□□ -0.82
HMGCL-202ENST00000374487 CISD1Q9NZ45 108 aaKnown RBP9.95□□□□□ -0.82
HMGCL-202ENST00000374487 JKAMPQ9P055 326 aa9.95□□□□□ -0.82
HMGCL-202ENST00000374487 TRAV38-1A0A0B4J264 116 aa9.94□□□□□ -0.82
HMGCL-202ENST00000374487 A0A1W2PPE2 198 aa9.94□□□□□ -0.82
HMGCL-202ENST00000374487 A0A1W2PPH5 198 aa9.94□□□□□ -0.82
HMGCL-202ENST00000374487 hADV38S2A0JD32 116 aa9.94□□□□□ -0.82
HMGCL-202ENST00000374487 C17orf112F2Z3M2 114 aa9.94□□□□□ -0.82
HMGCL-202ENST00000374487 OR2C1O95371 312 aa9.94□□□□□ -0.82
HMGCL-202ENST00000374487 THBS3P49746 956 aa9.94□□□□□ -0.82
HMGCL-202ENST00000374487 KRTAP10-9P60411 292 aa9.94□□□□□ -0.82
HMGCL-202ENST00000374487 RAB5BP61020 215 aa9.94□□□□□ -0.82
HMGCL-202ENST00000374487 FFAR4Q5NUL3 377 aa9.94□□□□□ -0.82
HMGCL-202ENST00000374487 FAM24BQ8N5W8 94 aa9.94□□□□□ -0.82
HMGCL-202ENST00000374487 OR10G4Q8NGN3 311 aa9.94□□□□□ -0.82
HMGCL-202ENST00000374487 OR10G9Q8NGN4 311 aa9.94□□□□□ -0.82
HMGCL-202ENST00000374487 OR10G7Q8NGN6 311 aa9.94□□□□□ -0.82
HMGCL-202ENST00000374487 C2CD4CQ8TF44 421 aa9.94□□□□□ -0.82
HMGCL-202ENST00000374487 RAB39BQ96DA2 213 aa9.94□□□□□ -0.82
HMGCL-202ENST00000374487 TVP23CQ96ET8 276 aa9.94□□□□□ -0.82
HMGCL-202ENST00000374487 SAP30LQ9HAJ7 183 aa9.94□□□□□ -0.82
HMGCL-202ENST00000374487 NGBQ9NPG2 151 aa9.94□□□□□ -0.82
HMGCL-202ENST00000374487 C15orf62A8K5M9 175 aa9.94□□□□□ -0.82
HMGCL-202ENST00000374487 C1orf196B1AJZ1 125 aa9.94□□□□□ -0.82
HMGCL-202ENST00000374487 FOLR2P14207 255 aa9.94□□□□□ -0.82
HMGCL-202ENST00000374487 IGFBP2P18065 325 aa9.94□□□□□ -0.82
HMGCL-202ENST00000374487 AARDQ4LEZ3 155 aa9.94□□□□□ -0.82
HMGCL-202ENST00000374487 ACSM6Q6P461 480 aa9.94□□□□□ -0.82
HMGCL-202ENST00000374487 RBMS3Q6XE24 437 aaKnown RBP9.94□□□□□ -0.82
HMGCL-202ENST00000374487 C1orf229Q6ZS94 237 aaPredicted RBP9.94□□□□□ -0.82
HMGCL-202ENST00000374487 C1orf87Q8N0U7 546 aa9.94□□□□□ -0.82
HMGCL-202ENST00000374487 OR52E5Q8NH55 327 aa9.94□□□□□ -0.82
HMGCL-202ENST00000374487 DDB2Q92466 427 aa9.94□□□□□ -0.82
HMGCL-202ENST00000374487 ADTRPQ96IZ2 230 aa9.94□□□□□ -0.82
HMGCL-202ENST00000374487 NPCDR1Q9BY65 106 aa9.94□□□□□ -0.82
HMGCL-202ENST00000374487 BIN3Q9NQY0 253 aa9.94□□□□□ -0.82
HMGCL-202ENST00000374487 VAX2Q9UIW0 290 aa9.94□□□□□ -0.82
HMGCL-202ENST00000374487 PLCE1Q9P212 2302 aa9.93□□□□□ -0.82
HMGCL-202ENST00000374487 HMGB3O15347 200 aaKnown RBP9.93□□□□□ -0.82
HMGCL-202ENST00000374487 EIF3GO75821 320 aaKnown RBP eCLIP9.93□□□□□ -0.82
HMGCL-202ENST00000374487 IGKV1D-33P01593 117 aa9.93□□□□□ -0.82
HMGCL-202ENST00000374487 IGKV1-33P01594 117 aa9.93□□□□□ -0.82
HMGCL-202ENST00000374487 CD1BP29016 333 aa9.93□□□□□ -0.82
HMGCL-202ENST00000374487 DLK1P80370 383 aa9.93□□□□□ -0.82
HMGCL-202ENST00000374487 RELBQ01201 579 aa9.93□□□□□ -0.82
HMGCL-202ENST00000374487 VWC2Q2TAL6 325 aa9.93□□□□□ -0.82
HMGCL-202ENST00000374487 RNF212Q495C1 297 aa9.93□□□□□ -0.82
HMGCL-202ENST00000374487 TCF23Q7RTU1 214 aa9.93□□□□□ -0.82
HMGCL-202ENST00000374487 CCL17Q92583 94 aa9.93□□□□□ -0.82
HMGCL-202ENST00000374487 RHOVQ96L33 236 aa9.93□□□□□ -0.82
HMGCL-202ENST00000374487 WFIKKN1Q96NZ8 548 aa9.93□□□□□ -0.82
HMGCL-202ENST00000374487 SLC25A22Q9H936 323 aa9.93□□□□□ -0.82
HMGCL-202ENST00000374487 SLC25A10Q9UBX3 287 aaPredicted RBP9.93□□□□□ -0.82
HMGCL-202ENST00000374487 UNC79Q9P2D8 2635 aa9.93□□□□□ -0.82
HMGCL-202ENST00000374487 PKDREJQ9NTG1 2253 aa9.93□□□□□ -0.82
HMGCL-202ENST00000374487 TRAV3A0A0B4J244 114 aa9.92□□□□□ -0.82
HMGCL-202ENST00000374487 SMCO3A2RU48 225 aa9.92□□□□□ -0.82
HMGCL-202ENST00000374487 COX6B1P14854 86 aa9.92□□□□□ -0.82
HMGCL-202ENST00000374487 HOXA1P49639 335 aaPredicted RBP9.92□□□□□ -0.82
HMGCL-202ENST00000374487 TMEM30BQ3MIR4 351 aa9.92□□□□□ -0.82
HMGCL-202ENST00000374487 SLC35E3Q7Z769 313 aa9.92□□□□□ -0.82
HMGCL-202ENST00000374487 CORO2AQ92828 525 aa9.92□□□□□ -0.82
HMGCL-202ENST00000374487 P2RX4Q99571 388 aa9.92□□□□□ -0.82
HMGCL-202ENST00000374487 ACTR3CQ9C0K3 210 aaPredicted RBP9.92□□□□□ -0.82
HMGCL-202ENST00000374487 CTXND1A0A1B0GTU2 59 aa9.92□□□□□ -0.82
HMGCL-202ENST00000374487 MMP23AO75900 390 aa9.92□□□□□ -0.82
HMGCL-202ENST00000374487 RAB5AP20339 215 aa9.92□□□□□ -0.82
HMGCL-202ENST00000374487 AKR1D1P51857 326 aa9.92□□□□□ -0.82
HMGCL-202ENST00000374487 RPL31P62899 125 aaKnown RBP9.92□□□□□ -0.82
HMGCL-202ENST00000374487 IQCF2Q8IXL9 164 aa9.92□□□□□ -0.82
HMGCL-202ENST00000374487 DMRTC2Q8IXT2 367 aaPredicted RBP9.92□□□□□ -0.82
HMGCL-202ENST00000374487 ZNF251Q9BRH9 671 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms