RNA–Protein interactions for RNA: ENST00000361439.8

NSMCE1-201, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSMCE1, Length 1,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-201ENST00000361439 GLYATL2Q8WU03 294 aa10.93□□□□□ -0.66
NSMCE1-201ENST00000361439 TMEM68Q96MH6 324 aa10.93□□□□□ -0.66
NSMCE1-201ENST00000361439 WNT10AQ9GZT5 417 aa10.93□□□□□ -0.66
NSMCE1-201ENST00000361439 FCN1O00602 326 aa10.92□□□□□ -0.66
NSMCE1-201ENST00000361439 ACTL6BO94805 426 aa10.92□□□□□ -0.66
NSMCE1-201ENST00000361439 KRASP01116 189 aa10.92□□□□□ -0.66
NSMCE1-201ENST00000361439 MECP2P51608 486 aaKnown RBP10.92□□□□□ -0.66
NSMCE1-201ENST00000361439 RPL8P62917 257 aaKnown RBP10.92□□□□□ -0.66
NSMCE1-201ENST00000361439 SUPT4H1P63272 117 aaKnown RBP10.92□□□□□ -0.66
NSMCE1-201ENST00000361439 TMEM267Q0VDI3 215 aaPredicted RBP10.92□□□□□ -0.66
NSMCE1-201ENST00000361439 TRIM16LQ309B1 348 aa10.92□□□□□ -0.66
NSMCE1-201ENST00000361439 FAM219AQ8IW50 185 aa10.92□□□□□ -0.66
NSMCE1-201ENST00000361439 VKORC1L1Q8N0U8 176 aa10.92□□□□□ -0.66
NSMCE1-201ENST00000361439 DUSP18Q8NEJ0 188 aa10.92□□□□□ -0.66
NSMCE1-201ENST00000361439 ENKURQ8TC29 256 aa10.92□□□□□ -0.66
NSMCE1-201ENST00000361439 RBPMSQ93062 196 aaKnown RBP10.92□□□□□ -0.66
NSMCE1-201ENST00000361439 RBMXL1Q96E39 390 aaKnown RBP10.92□□□□□ -0.66
NSMCE1-201ENST00000361439 SEC22AQ96IW7 307 aa10.92□□□□□ -0.66
NSMCE1-201ENST00000361439 HSPB9Q9BQS6 159 aa10.92□□□□□ -0.66
NSMCE1-201ENST00000361439 TMEM140Q9NV12 185 aa10.92□□□□□ -0.66
NSMCE1-201ENST00000361439 NUBP2Q9Y5Y2 271 aa10.92□□□□□ -0.66
NSMCE1-201ENST00000361439 UPK2O00526 184 aa10.91□□□□□ -0.66
NSMCE1-201ENST00000361439 CNIH1O95406 144 aa10.91□□□□□ -0.66
NSMCE1-201ENST00000361439 CA2P00918 260 aa10.91□□□□□ -0.66
NSMCE1-201ENST00000361439 IGKV1-39P01597 117 aa10.91□□□□□ -0.66
NSMCE1-201ENST00000361439 IGKV1D-39P04432 117 aa10.91□□□□□ -0.66
NSMCE1-201ENST00000361439 TMEM187Q14656 261 aa10.91□□□□□ -0.66
NSMCE1-201ENST00000361439 FXYD3Q14802 87 aa10.91□□□□□ -0.66
NSMCE1-201ENST00000361439 MRGPRG-AS1Q2M3A8 158 aa10.91□□□□□ -0.66
NSMCE1-201ENST00000361439 AKIRIN2Q53H80 203 aa10.91□□□□□ -0.66
NSMCE1-201ENST00000361439 STPG2Q8N412 459 aa10.91□□□□□ -0.66
NSMCE1-201ENST00000361439 COMMD1Q8N668 190 aa10.91□□□□□ -0.66
NSMCE1-201ENST00000361439 SGMS2Q8NHU3 365 aa10.91□□□□□ -0.66
NSMCE1-201ENST00000361439 ARPC1AQ92747 370 aa10.91□□□□□ -0.66
NSMCE1-201ENST00000361439 C20orf85Q9H1P6 137 aa10.91□□□□□ -0.66
NSMCE1-201ENST00000361439 ZNF430Q9H8G1 570 aaPredicted RBP10.91□□□□□ -0.66
NSMCE1-201ENST00000361439 TPSG1Q9NRR2 321 aa10.91□□□□□ -0.66
NSMCE1-201ENST00000361439 FKBP11Q9NYL4 201 aa10.91□□□□□ -0.66
NSMCE1-201ENST00000361439 CACFD1Q9UGQ2 172 aa10.91□□□□□ -0.66
NSMCE1-201ENST00000361439 DUXBA0A1W2PPF3 345 aa10.9□□□□□ -0.66
NSMCE1-201ENST00000361439 SH2D7A6NKC9 451 aaPredicted RBP10.9□□□□□ -0.66
NSMCE1-201ENST00000361439 ARPC1BO15143 372 aaKnown RBP10.9□□□□□ -0.66
NSMCE1-201ENST00000361439 SFT2D2O95562 160 aa10.9□□□□□ -0.66
NSMCE1-201ENST00000361439 G6PCP35575 357 aa10.9□□□□□ -0.66
NSMCE1-201ENST00000361439 SLC35B1P78383 322 aa10.9□□□□□ -0.66
NSMCE1-201ENST00000361439 SP6Q3SY56 376 aa10.9□□□□□ -0.66
NSMCE1-201ENST00000361439 THOC7Q6I9Y2 204 aaKnown RBP10.9□□□□□ -0.66
NSMCE1-201ENST00000361439 SSX9Q7RTT3 188 aa10.9□□□□□ -0.66
NSMCE1-201ENST00000361439 H2BFWTQ7Z2G1 175 aa10.9□□□□□ -0.66
NSMCE1-201ENST00000361439 ZNF695Q8IW36 515 aa10.9□□□□□ -0.66
NSMCE1-201ENST00000361439 LGI3Q8N145 548 aa10.9□□□□□ -0.66
NSMCE1-201ENST00000361439 LRTM2Q8N967 370 aa10.9□□□□□ -0.66
NSMCE1-201ENST00000361439 WIPF2Q8TF74 440 aaPredicted RBP10.9□□□□□ -0.66
NSMCE1-201ENST00000361439 TAF15Q92804 592 aaKnown RBP eCLIP10.9□□□□□ -0.66
NSMCE1-201ENST00000361439 LSM10Q969L4 123 aaKnown RBP10.9□□□□□ -0.66
NSMCE1-201ENST00000361439 RRNAD1Q96FB5 475 aaKnown RBP10.9□□□□□ -0.66
NSMCE1-201ENST00000361439 CLCC1Q96S66 551 aa10.9□□□□□ -0.66
NSMCE1-201ENST00000361439 PRNDQ9UKY0 176 aa10.9□□□□□ -0.66
NSMCE1-201ENST00000361439 A0A0B4J2A0 478 aa10.89□□□□□ -0.67
NSMCE1-201ENST00000361439 SNAPC5O75971 98 aa10.89□□□□□ -0.67
NSMCE1-201ENST00000361439 OR4E1P0C645 316 aa10.89□□□□□ -0.67
NSMCE1-201ENST00000361439 P0C879 139 aa10.89□□□□□ -0.67
NSMCE1-201ENST00000361439 HLA-GP17693 338 aa10.89□□□□□ -0.67
NSMCE1-201ENST00000361439 VDAC1P21796 283 aa10.89□□□□□ -0.67
NSMCE1-201ENST00000361439 VAMP1P23763 118 aa10.89□□□□□ -0.67
NSMCE1-201ENST00000361439 AKR1C2P52895 323 aa10.89□□□□□ -0.67
NSMCE1-201ENST00000361439 RAB25P57735 213 aa10.89□□□□□ -0.67
NSMCE1-201ENST00000361439 PJVKQ0ZLH3 352 aa10.89□□□□□ -0.67
NSMCE1-201ENST00000361439 PPP1R1AQ13522 171 aa10.89□□□□□ -0.67
NSMCE1-201ENST00000361439 DCTN2Q13561 401 aaKnown RBP10.89□□□□□ -0.67
NSMCE1-201ENST00000361439 C12orf54Q6X4T0 127 aa10.89□□□□□ -0.67
NSMCE1-201ENST00000361439 CENPVQ7Z7K6 275 aaPredicted RBP10.89□□□□□ -0.67
NSMCE1-201ENST00000361439 ZNF429Q86V71 674 aa10.89□□□□□ -0.67
NSMCE1-201ENST00000361439 SELENOHQ8IZQ5 122 aaKnown RBP10.89□□□□□ -0.67
NSMCE1-201ENST00000361439 KLHDC1Q8N7A1 406 aa10.89□□□□□ -0.67
NSMCE1-201ENST00000361439 SPATA3Q8NHX4 192 aa10.89□□□□□ -0.67
NSMCE1-201ENST00000361439 WFDC12Q8WWY7 111 aa10.89□□□□□ -0.67
NSMCE1-201ENST00000361439 MDFIQ99750 246 aa10.89□□□□□ -0.67
NSMCE1-201ENST00000361439 SPIN2AQ99865 258 aa10.89□□□□□ -0.67
NSMCE1-201ENST00000361439 SPIN2BQ9BPZ2 258 aa10.89□□□□□ -0.67
NSMCE1-201ENST00000361439 SRSF8Q9BRL6 282 aaKnown RBP10.89□□□□□ -0.67
NSMCE1-201ENST00000361439 ZNF747Q9BV97 191 aa10.89□□□□□ -0.67
NSMCE1-201ENST00000361439 PARP11Q9NR21 331 aa10.89□□□□□ -0.67
NSMCE1-201ENST00000361439 NUDT15Q9NV35 164 aa10.89□□□□□ -0.67
NSMCE1-201ENST00000361439 SHPKQ9UHJ6 478 aa10.89□□□□□ -0.67
NSMCE1-201ENST00000361439 FLVCR2Q9UPI3 526 aa10.89□□□□□ -0.67
NSMCE1-201ENST00000361439 C9orf170A2RU37 121 aa10.88□□□□□ -0.67
NSMCE1-201ENST00000361439 LINC01548A6NM66 108 aa10.88□□□□□ -0.67
NSMCE1-201ENST00000361439 ATP6V0E1O15342 81 aa10.88□□□□□ -0.67
NSMCE1-201ENST00000361439 DUS4LO95620 317 aaKnown RBP10.88□□□□□ -0.67
NSMCE1-201ENST00000361439 PTTG1O95997 202 aa10.88□□□□□ -0.67
NSMCE1-201ENST00000361439 HLA-AP01891 365 aaKnown RBP10.88□□□□□ -0.67
NSMCE1-201ENST00000361439 H2AFB2P0C5Z0 115 aa10.88□□□□□ -0.67
NSMCE1-201ENST00000361439 EGR2P11161 476 aaPredicted RBP10.88□□□□□ -0.67
NSMCE1-201ENST00000361439 GNB1P62873 340 aa10.88□□□□□ -0.67
NSMCE1-201ENST00000361439 SSBP2P81877 361 aaPredicted RBP10.88□□□□□ -0.67
NSMCE1-201ENST00000361439 NDPQ00604 133 aa10.88□□□□□ -0.67
NSMCE1-201ENST00000361439 CFHR3Q02985 330 aa10.88□□□□□ -0.67
NSMCE1-201ENST00000361439 DHRS2Q13268 280 aa10.88□□□□□ -0.67
NSMCE1-201ENST00000361439 TNXAQ16473 311 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms