RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 TMEM238C9JI98 176 aa6.39□□□□□ -1.39
BRCA1-201ENST00000352993 SCRG1O75711 98 aa6.39□□□□□ -1.39
BRCA1-201ENST00000352993 RHBDL1O75783 438 aa6.39□□□□□ -1.39
BRCA1-201ENST00000352993 APOA2P02652 100 aa6.39□□□□□ -1.39
BRCA1-201ENST00000352993 CCL3P10147 92 aa6.39□□□□□ -1.39
BRCA1-201ENST00000352993 COL8A2P25067 703 aa6.39□□□□□ -1.39
BRCA1-201ENST00000352993 CEACAM21Q3KPI0 293 aa6.39□□□□□ -1.39
BRCA1-201ENST00000352993 OR10J3Q5JRS4 329 aa6.39□□□□□ -1.39
BRCA1-201ENST00000352993 FAM53AQ6NSI3 398 aaPredicted RBP6.39□□□□□ -1.39
BRCA1-201ENST00000352993 CPT1CQ8TCG5 803 aa6.39□□□□□ -1.39
BRCA1-201ENST00000352993 ZC2HC1AQ96GY0 325 aa6.39□□□□□ -1.39
BRCA1-201ENST00000352993 CSTL1Q9H114 145 aa6.39□□□□□ -1.39
BRCA1-201ENST00000352993 TRAV9-1A0A075B6T8 112 aa6.39□□□□□ -1.39
BRCA1-201ENST00000352993 RRHO14718 337 aa6.39□□□□□ -1.39
BRCA1-201ENST00000352993 GCHFRP30047 84 aa6.39□□□□□ -1.39
BRCA1-201ENST00000352993 NTF4P34130 210 aa6.39□□□□□ -1.39
BRCA1-201ENST00000352993 UBE2G1P62253 170 aa6.39□□□□□ -1.39
BRCA1-201ENST00000352993 RPL30P62888 115 aaKnown RBP6.39□□□□□ -1.39
BRCA1-201ENST00000352993 TNXAQ16473 311 aa6.39□□□□□ -1.39
BRCA1-201ENST00000352993 Q6ZS52 159 aa6.39□□□□□ -1.39
BRCA1-201ENST00000352993 FOXL2NBQ6ZUU3 175 aa6.39□□□□□ -1.39
BRCA1-201ENST00000352993 OR2T6Q8NHC8 308 aa6.39□□□□□ -1.39
BRCA1-201ENST00000352993 SFXN3Q9BWM7 321 aa6.39□□□□□ -1.39
BRCA1-201ENST00000352993 CLEC5AQ9NY25 188 aa6.39□□□□□ -1.39
BRCA1-201ENST00000352993 IGHV3-43A0A0B4J1X8 118 aa6.39□□□□□ -1.39
BRCA1-201ENST00000352993 OR5B21A6NL26 309 aa6.39□□□□□ -1.39
BRCA1-201ENST00000352993 DEFB108AA8MXU0 73 aa6.39□□□□□ -1.39
BRCA1-201ENST00000352993 BMPR1BO00238 502 aa6.39□□□□□ -1.39
BRCA1-201ENST00000352993 TIAF1O95411 115 aa6.39□□□□□ -1.39
BRCA1-201ENST00000352993 NGFP01138 241 aa6.39□□□□□ -1.39
BRCA1-201ENST00000352993 CGAP01215 116 aa6.39□□□□□ -1.39
BRCA1-201ENST00000352993 PPBPP02775 128 aa6.39□□□□□ -1.39
BRCA1-201ENST00000352993 AMY1AP04745 511 aa6.39□□□□□ -1.39
BRCA1-201ENST00000352993 IGHV3-43DP0DP04 118 aa6.39□□□□□ -1.39
BRCA1-201ENST00000352993 CA7P43166 264 aa6.39□□□□□ -1.39
BRCA1-201ENST00000352993 GPR6P46095 362 aaPredicted RBP6.39□□□□□ -1.39
BRCA1-201ENST00000352993 CFHR1Q03591 330 aa6.39□□□□□ -1.39
BRCA1-201ENST00000352993 SRYQ05066 204 aa6.39□□□□□ -1.39
BRCA1-201ENST00000352993 SRSF7Q16629 238 aaKnown RBP eCLIP6.39□□□□□ -1.39
BRCA1-201ENST00000352993 SPATA46Q5T0L3 261 aa6.39□□□□□ -1.39
BRCA1-201ENST00000352993 SPATA31B1PQ5VZV4 182 aa6.39□□□□□ -1.39
BRCA1-201ENST00000352993 ZNF841Q6ZN19 808 aa6.39□□□□□ -1.39
BRCA1-201ENST00000352993 OR8B2Q96RD0 313 aa6.39□□□□□ -1.39
BRCA1-201ENST00000352993 MUC21A0A0G2JKD1 596 aa6.38□□□□□ -1.39
BRCA1-201ENST00000352993 MUC21A0A140T8X8 626 aa6.38□□□□□ -1.39
BRCA1-201ENST00000352993 OR7C2O60412 319 aa6.38□□□□□ -1.39
BRCA1-201ENST00000352993 FOXH1O75593 365 aa6.38□□□□□ -1.39
BRCA1-201ENST00000352993 MMP23AO75900 390 aa6.38□□□□□ -1.39
BRCA1-201ENST00000352993 IGLV2-14P01704 120 aa6.38□□□□□ -1.39
BRCA1-201ENST00000352993 HLA-DQA1P01909 254 aa6.38□□□□□ -1.39
BRCA1-201ENST00000352993 CCR5P51681 352 aa6.38□□□□□ -1.39
BRCA1-201ENST00000352993 PSG5Q15238 335 aa6.38□□□□□ -1.39
BRCA1-201ENST00000352993 GABRA6Q16445 453 aa6.38□□□□□ -1.39
BRCA1-201ENST00000352993 MUC21Q5SSG8 566 aa6.38□□□□□ -1.39
BRCA1-201ENST00000352993 DCAF12Q5T6F0 453 aa6.38□□□□□ -1.39
BRCA1-201ENST00000352993 PRAMEF5Q5TYX0 476 aa6.38□□□□□ -1.39
BRCA1-201ENST00000352993 PRAMEF6Q5VXH4 476 aa6.38□□□□□ -1.39
BRCA1-201ENST00000352993 TMEM136Q6ZRR5 245 aa6.38□□□□□ -1.39
BRCA1-201ENST00000352993 WFDC8Q8IUA0 241 aa6.38□□□□□ -1.39
BRCA1-201ENST00000352993 PNKDQ8N490 385 aa6.38□□□□□ -1.39
BRCA1-201ENST00000352993 OR52L2PQ8NGH6 319 aa6.38□□□□□ -1.39
BRCA1-201ENST00000352993 MAFAQ8NHW3 353 aaPredicted RBP6.38□□□□□ -1.39
BRCA1-201ENST00000352993 FGF23Q9GZV9 251 aaPredicted RBP6.38□□□□□ -1.39
BRCA1-201ENST00000352993 HEATR1Q9H583 2144 aaKnown RBP6.38□□□□□ -1.39
BRCA1-201ENST00000352993 GAGE12BA1L429 117 aa6.38□□□□□ -1.39
BRCA1-201ENST00000352993 MFAP2P55001 183 aa6.38□□□□□ -1.39
BRCA1-201ENST00000352993 C1orf185Q5T7R7 199 aa6.38□□□□□ -1.39
BRCA1-201ENST00000352993 OR4A16Q8NH70 328 aa6.38□□□□□ -1.39
BRCA1-201ENST00000352993 RFESDQ8TAC1 157 aa6.38□□□□□ -1.39
BRCA1-201ENST00000352993 TXNDC17Q9BRA2 123 aa6.38□□□□□ -1.39
BRCA1-201ENST00000352993 FSCN3Q9NQT6 498 aa6.38□□□□□ -1.39
BRCA1-201ENST00000352993 WDR83OSQ9Y284 106 aa6.38□□□□□ -1.39
BRCA1-201ENST00000352993 V9GYV3 84 aa6.38□□□□□ -1.39
BRCA1-201ENST00000352993 hDV102S1A0JD36 115 aa6.38□□□□□ -1.39
BRCA1-201ENST00000352993 GJE1A6NN92 205 aa6.38□□□□□ -1.39
BRCA1-201ENST00000352993 NEURL1O76050 574 aa6.38□□□□□ -1.39
BRCA1-201ENST00000352993 LINC00869P0C866 280 aa6.38□□□□□ -1.39
BRCA1-201ENST00000352993 STAG3L2P0CL84 134 aa6.38□□□□□ -1.39
BRCA1-201ENST00000352993 STAG3L3P0CL85 134 aa6.38□□□□□ -1.39
BRCA1-201ENST00000352993 DSCR4P56555 118 aaPredicted RBP6.38□□□□□ -1.39
BRCA1-201ENST00000352993 RHOBP62745 196 aa6.38□□□□□ -1.39
BRCA1-201ENST00000352993 CX3CL1P78423 397 aa6.38□□□□□ -1.39
BRCA1-201ENST00000352993 MORN2Q502X0 79 aa6.38□□□□□ -1.39
BRCA1-201ENST00000352993 IBA57Q5T440 356 aaKnown RBP6.38□□□□□ -1.39
BRCA1-201ENST00000352993 FADS6Q8N9I5 356 aa6.38□□□□□ -1.39
BRCA1-201ENST00000352993 OR2M7Q8NG81 312 aa6.38□□□□□ -1.39
BRCA1-201ENST00000352993 ABHD3Q8WU67 409 aa6.38□□□□□ -1.39
BRCA1-201ENST00000352993 KCNE4Q8WWG9 221 aa6.38□□□□□ -1.39
BRCA1-201ENST00000352993 MS4A5Q9H3V2 200 aa6.38□□□□□ -1.39
BRCA1-201ENST00000352993 SEPSECSQ9HD40 501 aaKnown RBP6.38□□□□□ -1.39
BRCA1-201ENST00000352993 MMP17Q9ULZ9 603 aa6.38□□□□□ -1.39
BRCA1-201ENST00000352993 CHCHD2Q9Y6H1 151 aaPredicted RBP6.38□□□□□ -1.39
BRCA1-201ENST00000352993 DOCK10Q96BY6 2186 aa6.37□□□□□ -1.39
BRCA1-201ENST00000352993 IGLV3-32A0A0A0MS00 114 aa6.37□□□□□ -1.39
BRCA1-201ENST00000352993 FAM181BA6NEQ2 426 aa6.37□□□□□ -1.39
BRCA1-201ENST00000352993 OR4C46A6NHA9 309 aa6.37□□□□□ -1.39
BRCA1-201ENST00000352993 PMS2P5A8MQ11 134 aa6.37□□□□□ -1.39
BRCA1-201ENST00000352993 SNAI2O43623 268 aa6.37□□□□□ -1.39
BRCA1-201ENST00000352993 ZIC3O60481 467 aa6.37□□□□□ -1.39
BRCA1-201ENST00000352993 MRPL33O75394 65 aaKnown RBP6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms