RNA–Protein interactions for RNA: ENST00000349379.5

SNX3-202, Transcript of sorting nexin 3, humanhuman

TSL 2 BASIC

Gene SNX3, Length 890 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-202ENST00000349379 FHL3Q13643 280 aa17.16■□□□□ 0.34
SNX3-202ENST00000349379 IL18Q14116 193 aa17.16■□□□□ 0.34
SNX3-202ENST00000349379 DEFB136Q30KP8 78 aa17.16■□□□□ 0.34
SNX3-202ENST00000349379 OXLD1Q5BKU9 147 aa17.16■□□□□ 0.34
SNX3-202ENST00000349379 C1QL4Q86Z23 238 aa17.16■□□□□ 0.34
SNX3-202ENST00000349379 CMTM1Q8IZ96 169 aa17.16■□□□□ 0.34
SNX3-202ENST00000349379 CASTOR1Q8WTX7 329 aa17.16■□□□□ 0.34
SNX3-202ENST00000349379 SLA2Q9H6Q3 261 aa17.16■□□□□ 0.34
SNX3-202ENST00000349379 PLEKHA2Q9HB19 425 aa17.16■□□□□ 0.34
SNX3-202ENST00000349379 BET1LQ9NYM9 111 aa17.16■□□□□ 0.34
SNX3-202ENST00000349379 MEGF8Q7Z7M0 2845 aa17.16■□□□□ 0.34
SNX3-202ENST00000349379 IL6RP08887 468 aaPredicted RBP17.15■□□□□ 0.34
SNX3-202ENST00000349379 F2RP25116 425 aa17.15■□□□□ 0.34
SNX3-202ENST00000349379 DEFA6Q01524 100 aa17.15■□□□□ 0.34
SNX3-202ENST00000349379 SLC38A6Q8IZM9 456 aa17.15■□□□□ 0.34
SNX3-202ENST00000349379 POC5Q8NA72 575 aa17.15■□□□□ 0.34
SNX3-202ENST00000349379 OR4D10Q8NGI6 311 aa17.15■□□□□ 0.34
SNX3-202ENST00000349379 DUX3Q96PT4 197 aa17.15■□□□□ 0.34
SNX3-202ENST00000349379 AIFM2Q9BRQ8 373 aa17.15■□□□□ 0.34
SNX3-202ENST00000349379 COMMD9Q9P000 198 aa17.15■□□□□ 0.34
SNX3-202ENST00000349379 MSGN1A6NI15 193 aa17.14■□□□□ 0.33
SNX3-202ENST00000349379 GSTZ1O43708 216 aaPredicted RBP17.14■□□□□ 0.33
SNX3-202ENST00000349379 IFNA6P05013 189 aa17.14■□□□□ 0.33
SNX3-202ENST00000349379 NQO2P16083 231 aa17.14■□□□□ 0.33
SNX3-202ENST00000349379 C10orf55Q5SWW7 151 aa17.14■□□□□ 0.33
SNX3-202ENST00000349379 OR4A47Q6IF82 309 aa17.14■□□□□ 0.33
SNX3-202ENST00000349379 OR4A5Q8NH83 315 aa17.14■□□□□ 0.33
SNX3-202ENST00000349379 DGCR14Q96DF8 476 aaKnown RBP17.14■□□□□ 0.33
SNX3-202ENST00000349379 RCC1LQ96I51 464 aaKnown RBP17.14■□□□□ 0.33
SNX3-202ENST00000349379 FAM212BQ9NTI7 297 aaPredicted RBP17.14■□□□□ 0.33
SNX3-202ENST00000349379 ACTL6BO94805 426 aa17.13■□□□□ 0.33
SNX3-202ENST00000349379 S1PR2O95136 353 aa17.13■□□□□ 0.33
SNX3-202ENST00000349379 RAB3DO95716 219 aa17.13■□□□□ 0.33
SNX3-202ENST00000349379 ZNF735P0CB33 412 aa17.13■□□□□ 0.33
SNX3-202ENST00000349379 IGLL1P15814 213 aa17.13■□□□□ 0.33
SNX3-202ENST00000349379 MAS1LP35410 378 aa17.13■□□□□ 0.33
SNX3-202ENST00000349379 ZNF585BQ52M93 769 aa17.13■□□□□ 0.33
SNX3-202ENST00000349379 PHLDA2Q53GA4 152 aa17.13■□□□□ 0.33
SNX3-202ENST00000349379 STEAP1BQ6NZ63 245 aa17.13■□□□□ 0.33
SNX3-202ENST00000349379 SSX9Q7RTT3 188 aa17.13■□□□□ 0.33
SNX3-202ENST00000349379 OR5T1Q8NG75 326 aa17.13■□□□□ 0.33
SNX3-202ENST00000349379 DUS4LO95620 317 aaKnown RBP17.12■□□□□ 0.33
SNX3-202ENST00000349379 FGF2P09038 288 aa17.12■□□□□ 0.33
SNX3-202ENST00000349379 CD40LGP29965 261 aa17.12■□□□□ 0.33
SNX3-202ENST00000349379 TPPP2P59282 170 aa17.12■□□□□ 0.33
SNX3-202ENST00000349379 CADM3Q8N126 398 aa17.12■□□□□ 0.33
SNX3-202ENST00000349379 ADAD2Q8NCV1 583 aaKnown RBP17.12■□□□□ 0.33
SNX3-202ENST00000349379 OR11H1Q8NG94 326 aa17.12■□□□□ 0.33
SNX3-202ENST00000349379 MS4A10Q96PG2 267 aa17.12■□□□□ 0.33
SNX3-202ENST00000349379 SPIN2AQ99865 258 aa17.12■□□□□ 0.33
SNX3-202ENST00000349379 SPIN2BQ9BPZ2 258 aa17.12■□□□□ 0.33
SNX3-202ENST00000349379 A0A1B0GW64 132 aa17.11■□□□□ 0.33
SNX3-202ENST00000349379 FABP12A6NFH5 140 aa17.11■□□□□ 0.33
SNX3-202ENST00000349379 TEX22C9J3V5 150 aa17.11■□□□□ 0.33
SNX3-202ENST00000349379 E7EUB6 86 aa17.11■□□□□ 0.33
SNX3-202ENST00000349379 TRGV3P03979 118 aa17.11■□□□□ 0.33
SNX3-202ENST00000349379 LGALS1P09382 135 aaKnown RBP17.11■□□□□ 0.33
SNX3-202ENST00000349379 RND3P61587 244 aa17.11■□□□□ 0.33
SNX3-202ENST00000349379 RPL8P62917 257 aaKnown RBP17.11■□□□□ 0.33
SNX3-202ENST00000349379 TBC1D26Q86UD7 250 aa17.11■□□□□ 0.33
SNX3-202ENST00000349379 MRGPRFQ96AM1 343 aa17.11■□□□□ 0.33
SNX3-202ENST00000349379 ZNF486Q96H40 463 aaPredicted RBP17.11■□□□□ 0.33
SNX3-202ENST00000349379 PHB2Q99623 299 aa17.11■□□□□ 0.33
SNX3-202ENST00000349379 SLC2A9Q9NRM0 540 aa17.11■□□□□ 0.33
SNX3-202ENST00000349379 UPK2O00526 184 aa17.1■□□□□ 0.33
SNX3-202ENST00000349379 OR9G9P0C7N8 305 aa17.1■□□□□ 0.33
SNX3-202ENST00000349379 APELAP0DMC3 54 aa17.1■□□□□ 0.33
SNX3-202ENST00000349379 PTBP1P26599 531 aaKnown RBP eCLIP17.1■□□□□ 0.33
SNX3-202ENST00000349379 S100GP29377 79 aa17.1■□□□□ 0.33
SNX3-202ENST00000349379 RPL27AP46776 148 aaKnown RBP17.1■□□□□ 0.33
SNX3-202ENST00000349379 MEF2DQ14814 521 aa17.1■□□□□ 0.33
SNX3-202ENST00000349379 TERB2Q8NHR7 220 aa17.1■□□□□ 0.33
SNX3-202ENST00000349379 OR5B12Q96R08 314 aa17.1■□□□□ 0.33
SNX3-202ENST00000349379 TMEM140Q9NV12 185 aa17.1■□□□□ 0.33
SNX3-202ENST00000349379 V9GYH0 126 aa17.1■□□□□ 0.33
SNX3-202ENST00000349379 DNAH3Q8TD57 4116 aa17.1■□□□□ 0.33
SNX3-202ENST00000349379 TRAV3A0A0B4J244 114 aa17.09■□□□□ 0.33
SNX3-202ENST00000349379 ANKRD20A5PA0PJZ0 165 aa17.09■□□□□ 0.33
SNX3-202ENST00000349379 HLA-GP17693 338 aa17.09■□□□□ 0.33
SNX3-202ENST00000349379 LPAR6P43657 344 aa17.09■□□□□ 0.33
SNX3-202ENST00000349379 ZNF616Q08AN1 781 aa17.09■□□□□ 0.33
SNX3-202ENST00000349379 CCDC190Q86UF4 302 aa17.09■□□□□ 0.33
SNX3-202ENST00000349379 TTC9CQ8N5M4 171 aa17.09■□□□□ 0.33
SNX3-202ENST00000349379 OR4C16Q8NGL9 310 aa17.09■□□□□ 0.33
SNX3-202ENST00000349379 OR1N2Q8NGR9 330 aa17.09■□□□□ 0.33
SNX3-202ENST00000349379 ALX4Q9H161 411 aaPredicted RBP17.09■□□□□ 0.33
SNX3-202ENST00000349379 CGB1A6NKQ9 187 aa17.08■□□□□ 0.32
SNX3-202ENST00000349379 MARCH11A6NNE9 402 aa17.08■□□□□ 0.32
SNX3-202ENST00000349379 AKAIN1P0CW23 69 aa17.08■□□□□ 0.32
SNX3-202ENST00000349379 PPP5CP53041 499 aa17.08■□□□□ 0.32
SNX3-202ENST00000349379 FAAP20Q6NZ36 180 aa17.08■□□□□ 0.32
SNX3-202ENST00000349379 MCRIP2Q9BUT9 160 aaKnown RBP17.08■□□□□ 0.32
SNX3-202ENST00000349379 HRASLSQ9HDD0 168 aa17.08■□□□□ 0.32
SNX3-202ENST00000349379 ZNF355PQ9NSJ1 428 aa17.08■□□□□ 0.32
SNX3-202ENST00000349379 TRBV9A0A0B4J1U6 114 aa17.07■□□□□ 0.32
SNX3-202ENST00000349379 HMX3A6NHT5 357 aa17.07■□□□□ 0.32
SNX3-202ENST00000349379 MPPED1O15442 326 aa17.07■□□□□ 0.32
SNX3-202ENST00000349379 RBMXL2O75526 392 aaKnown RBP17.07■□□□□ 0.32
SNX3-202ENST00000349379 IGHV3-11P01762 117 aa17.07■□□□□ 0.32
SNX3-202ENST00000349379 OR8U8P0C7N1 319 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms