RNA–Protein interactions for RNA: ENST00000345662.5

SPAST-202, Transcript of spastin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SPAST, Length 5,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-202ENST00000345662 A0A1W2PRD5 423 aa14.86□□□□□ -0.03
SPAST-202ENST00000345662 A0A1W2PRF3 423 aa14.86□□□□□ -0.03
SPAST-202ENST00000345662 A0A1W2PRM7 423 aa14.86□□□□□ -0.03
SPAST-202ENST00000345662 CALYQ9NYX4 217 aa14.86□□□□□ -0.03
SPAST-202ENST00000345662 WNK3Q9BYP7 1800 aa14.86□□□□□ -0.03
SPAST-202ENST00000345662 SAMD13Q5VXD3 122 aa14.86□□□□□ -0.03
SPAST-202ENST00000345662 ANKRD36A6QL64 1941 aa14.86□□□□□ -0.03
SPAST-202ENST00000345662 PTGDSP41222 190 aa14.86□□□□□ -0.03
SPAST-202ENST00000345662 RAB1CQ92928 201 aa14.86□□□□□ -0.03
SPAST-202ENST00000345662 SNAI2O43623 268 aa14.85□□□□□ -0.03
SPAST-202ENST00000345662 VKORC1L1Q8N0U8 176 aa14.85□□□□□ -0.03
SPAST-202ENST00000345662 A6NNC1 897 aa14.85□□□□□ -0.03
SPAST-202ENST00000345662 NDUFA2O43678 99 aa14.85□□□□□ -0.03
SPAST-202ENST00000345662 TTTY12Q9BZ98 90 aa14.85□□□□□ -0.03
SPAST-202ENST00000345662 TNFSF13O75888 250 aa14.85□□□□□ -0.03
SPAST-202ENST00000345662 TFPI2P48307 235 aa14.85□□□□□ -0.03
SPAST-202ENST00000345662 A0A1B0GW64 132 aa14.85□□□□□ -0.03
SPAST-202ENST00000345662 LYPD3O95274 346 aa14.85□□□□□ -0.03
SPAST-202ENST00000345662 TMEM78Q5T7P6 136 aa14.85□□□□□ -0.03
SPAST-202ENST00000345662 DERL1Q9BUN8 251 aa14.85□□□□□ -0.03
SPAST-202ENST00000345662 C19orf67A6NJJ6 358 aa14.84□□□□□ -0.03
SPAST-202ENST00000345662 LDLRAD4O15165 306 aa14.84□□□□□ -0.03
SPAST-202ENST00000345662 CELA2AP08217 269 aa14.84□□□□□ -0.03
SPAST-202ENST00000345662 SCARF2Q96GP6 870 aaPredicted RBP14.84□□□□□ -0.03
SPAST-202ENST00000345662 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.84□□□□□ -0.03
SPAST-202ENST00000345662 ZNF236Q9UL36 1845 aa14.84□□□□□ -0.03
SPAST-202ENST00000345662 C1QTNF9P0C862 333 aa14.84□□□□□ -0.03
SPAST-202ENST00000345662 CCL13Q99616 98 aa14.84□□□□□ -0.03
SPAST-202ENST00000345662 TRAV9-2A0A087WT02 112 aa14.84□□□□□ -0.03
SPAST-202ENST00000345662 IZUMO1RA6ND01 250 aa14.84□□□□□ -0.03
SPAST-202ENST00000345662 PAQR4Q8N4S7 273 aaPredicted RBP14.84□□□□□ -0.03
SPAST-202ENST00000345662 CLEC1BQ9P126 229 aa14.84□□□□□ -0.03
SPAST-202ENST00000345662 LINC00614P0C842 121 aa14.84□□□□□ -0.03
SPAST-202ENST00000345662 C1orf194Q5T5A4 169 aa14.84□□□□□ -0.03
SPAST-202ENST00000345662 PCSK4Q6UW60 755 aa14.84□□□□□ -0.03
SPAST-202ENST00000345662 C1QTNF9BB2RNN3 333 aa14.83□□□□□ -0.03
SPAST-202ENST00000345662 LDLRAD2Q5SZI1 272 aa14.83□□□□□ -0.03
SPAST-202ENST00000345662 JKAMPQ9P055 326 aa14.83□□□□□ -0.03
SPAST-202ENST00000345662 SOX21Q9Y651 276 aaPredicted RBP14.83□□□□□ -0.03
SPAST-202ENST00000345662 hCG_38984A0A1B0GV85 526 aa14.83□□□□□ -0.04
SPAST-202ENST00000345662 ZNF324O75467 553 aaPredicted RBP14.83□□□□□ -0.04
SPAST-202ENST00000345662 OR4A5Q8NH83 315 aa14.83□□□□□ -0.04
SPAST-202ENST00000345662 TTC9CQ8N5M4 171 aa14.83□□□□□ -0.04
SPAST-202ENST00000345662 OR5P3Q8WZ94 311 aa14.83□□□□□ -0.04
SPAST-202ENST00000345662 TMEM74BQ9NUR3 256 aa14.83□□□□□ -0.04
SPAST-202ENST00000345662 TAF1LQ8IZX4 1826 aa14.83□□□□□ -0.04
SPAST-202ENST00000345662 ARID2Q68CP9 1835 aa14.83□□□□□ -0.04
SPAST-202ENST00000345662 IGHV1-45A0A0A0MS14 117 aa14.83□□□□□ -0.04
SPAST-202ENST00000345662 A0A1B0GWB2 263 aa14.83□□□□□ -0.04
SPAST-202ENST00000345662 C5orf67F2Z3F1 127 aa14.83□□□□□ -0.04
SPAST-202ENST00000345662 LRTM2Q8N967 370 aa14.83□□□□□ -0.04
SPAST-202ENST00000345662 NEUROG1Q92886 237 aa14.83□□□□□ -0.04
SPAST-202ENST00000345662 UBR3Q6ZT12 1888 aa14.83□□□□□ -0.04
SPAST-202ENST00000345662 RBFOX2O43251 390 aaKnown RBP eCLIP14.82□□□□□ -0.04
SPAST-202ENST00000345662 APOHP02749 345 aaPredicted RBP14.82□□□□□ -0.04
SPAST-202ENST00000345662 GPR183P32249 361 aa14.82□□□□□ -0.04
SPAST-202ENST00000345662 GOLT1AQ6ZVE7 132 aa14.82□□□□□ -0.04
SPAST-202ENST00000345662 MBD3L1Q8WWY6 194 aa14.82□□□□□ -0.04
SPAST-202ENST00000345662 PPIAL4EA0A075B759 164 aa14.82□□□□□ -0.04
SPAST-202ENST00000345662 OR11H12B2RN74 326 aa14.82□□□□□ -0.04
SPAST-202ENST00000345662 C21orf140B9A014 251 aa14.82□□□□□ -0.04
SPAST-202ENST00000345662 PPIAL4DF5H284 164 aa14.82□□□□□ -0.04
SPAST-202ENST00000345662 ATXN7O15265 892 aaPredicted RBP14.82□□□□□ -0.04
SPAST-202ENST00000345662 PPIAL4FP0DN26 164 aa14.82□□□□□ -0.04
SPAST-202ENST00000345662 CEACAM1P13688 526 aa14.82□□□□□ -0.04
SPAST-202ENST00000345662 MST1P26927 711 aa14.82□□□□□ -0.04
SPAST-202ENST00000345662 ID3Q02535 119 aa14.82□□□□□ -0.04
SPAST-202ENST00000345662 FAM89BQ8N5H3 189 aa14.82□□□□□ -0.04
SPAST-202ENST00000345662 OR11H1Q8NG94 326 aa14.82□□□□□ -0.04
SPAST-202ENST00000345662 OR11H2Q8NH07 326 aa14.82□□□□□ -0.04
SPAST-202ENST00000345662 NPIPB3Q92617 1050 aa14.82□□□□□ -0.04
SPAST-202ENST00000345662 SLX1AQ9BQ83 275 aa14.82□□□□□ -0.04
SPAST-202ENST00000345662 PPIAL4AQ9Y536 164 aa14.82□□□□□ -0.04
SPAST-202ENST00000345662 HES7Q9BYE0 225 aa14.82□□□□□ -0.04
SPAST-202ENST00000345662 SRXN1Q9BYN0 137 aa14.82□□□□□ -0.04
SPAST-202ENST00000345662 RGPD3A6NKT7 1758 aaPredicted RBP14.82□□□□□ -0.04
SPAST-202ENST00000345662 RGPD4Q7Z3J3 1758 aa14.82□□□□□ -0.04
SPAST-202ENST00000345662 UNC13CQ8NB66 2214 aa14.82□□□□□ -0.04
SPAST-202ENST00000345662 ANOS1P23352 680 aa14.82□□□□□ -0.04
SPAST-202ENST00000345662 PSMG4Q5JS54 123 aa14.82□□□□□ -0.04
SPAST-202ENST00000345662 MBNL2Q5VZF2 373 aaKnown RBP14.82□□□□□ -0.04
SPAST-202ENST00000345662 IDI2-AS1Q9NZ38 188 aa14.82□□□□□ -0.04
SPAST-202ENST00000345662 COL11A1P12107 1806 aaPredicted RBP14.82□□□□□ -0.04
SPAST-202ENST00000345662 A0A1W2PRS3 328 aa14.81□□□□□ -0.04
SPAST-202ENST00000345662 SH2D7A6NKC9 451 aaPredicted RBP14.81□□□□□ -0.04
SPAST-202ENST00000345662 H3BTX0 84 aa14.81□□□□□ -0.04
SPAST-202ENST00000345662 H3BUT2 72 aa14.81□□□□□ -0.04
SPAST-202ENST00000345662 ACSF3Q4G176 576 aaPredicted RBP14.81□□□□□ -0.04
SPAST-202ENST00000345662 C5orf30Q96GV9 206 aa14.81□□□□□ -0.04
SPAST-202ENST00000345662 MRPL13Q9BYD1 178 aaKnown RBP14.81□□□□□ -0.04
SPAST-202ENST00000345662 CABIN1Q9Y6J0 2220 aa14.81□□□□□ -0.04
SPAST-202ENST00000345662 PROB1E7EW31 1015 aa14.81□□□□□ -0.04
SPAST-202ENST00000345662 ADCYAP1P18509 176 aa14.81□□□□□ -0.04
SPAST-202ENST00000345662 WDR31Q8NA23 367 aa14.81□□□□□ -0.04
SPAST-202ENST00000345662 ZNF784Q8NCA9 323 aaPredicted RBP14.81□□□□□ -0.04
SPAST-202ENST00000345662 TMEM208Q9BTX3 173 aa14.81□□□□□ -0.04
SPAST-202ENST00000345662 RAB1BQ9H0U4 201 aa14.81□□□□□ -0.04
SPAST-202ENST00000345662 MS4A5Q9H3V2 200 aa14.81□□□□□ -0.04
SPAST-202ENST00000345662 RSPO4Q2I0M5 234 aaPredicted RBP14.81□□□□□ -0.04
SPAST-202ENST00000345662 TRAV8-6A0A0B4J262 113 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms