RNA–Protein interactions for RNA: ENST00000335798.8

UBE2E2-201, Transcript of ubiquitin conjugating enzyme E2 E2, humanhuman

TSL 1 (best)

Gene UBE2E2, Length 1,330 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E2-201ENST00000335798 PRSS8Q16651 343 aa15.32■□□□□ 0.04
UBE2E2-201ENST00000335798 ZNF562Q6V9R5 426 aa15.32■□□□□ 0.04
UBE2E2-201ENST00000335798 SSX9Q7RTT3 188 aa15.32■□□□□ 0.04
UBE2E2-201ENST00000335798 WIPF2Q8TF74 440 aaPredicted RBP15.32■□□□□ 0.04
UBE2E2-201ENST00000335798 CLCC1Q96S66 551 aa15.32■□□□□ 0.04
UBE2E2-201ENST00000335798 ZNF430Q9H8G1 570 aaPredicted RBP15.32■□□□□ 0.04
UBE2E2-201ENST00000335798 TMEM140Q9NV12 185 aa15.32■□□□□ 0.04
UBE2E2-201ENST00000335798 FBXO7Q9Y3I1 522 aa15.32■□□□□ 0.04
UBE2E2-201ENST00000335798 RNF114Q9Y508 228 aa15.32■□□□□ 0.04
UBE2E2-201ENST00000335798 FAM240BA0A1B0GVZ2 78 aa15.31■□□□□ 0.04
UBE2E2-201ENST00000335798 KRASP01116 189 aa15.31■□□□□ 0.04
UBE2E2-201ENST00000335798 IGF1P05019 195 aa15.31■□□□□ 0.04
UBE2E2-201ENST00000335798 P0C879 139 aa15.31■□□□□ 0.04
UBE2E2-201ENST00000335798 VDAC2P45880 294 aaPredicted RBP15.31■□□□□ 0.04
UBE2E2-201ENST00000335798 MECP2P51608 486 aaKnown RBP15.31■□□□□ 0.04
UBE2E2-201ENST00000335798 CRIP2P52943 208 aaPredicted RBP15.31■□□□□ 0.04
UBE2E2-201ENST00000335798 PPP1R1AQ13522 171 aa15.31■□□□□ 0.04
UBE2E2-201ENST00000335798 OR4A5Q8NH83 315 aa15.31■□□□□ 0.04
UBE2E2-201ENST00000335798 TMEM56Q96MV1 263 aa15.31■□□□□ 0.04
UBE2E2-201ENST00000335798 OR51J1Q9H342 316 aa15.31■□□□□ 0.04
UBE2E2-201ENST00000335798 PALMDQ9NP74 551 aa15.31■□□□□ 0.04
UBE2E2-201ENST00000335798 NUDT15Q9NV35 164 aa15.31■□□□□ 0.04
UBE2E2-201ENST00000335798 TMEM56-RWDD3S4R434 201 aa15.31■□□□□ 0.04
UBE2E2-201ENST00000335798 TENM1Q9UKZ4 2725 aa15.3■□□□□ 0.04
UBE2E2-201ENST00000335798 ATP6V0E1O15342 81 aa15.3■□□□□ 0.04
UBE2E2-201ENST00000335798 IGKV1-5P01602 117 aa15.3■□□□□ 0.04
UBE2E2-201ENST00000335798 FGF2P09038 288 aa15.3■□□□□ 0.04
UBE2E2-201ENST00000335798 EGR2P11161 476 aaPredicted RBP15.3■□□□□ 0.04
UBE2E2-201ENST00000335798 DEFA1P59665 94 aa15.3■□□□□ 0.04
UBE2E2-201ENST00000335798 DEFA3P59666 94 aa15.3■□□□□ 0.04
UBE2E2-201ENST00000335798 NRARPQ7Z6K4 114 aa15.3■□□□□ 0.04
UBE2E2-201ENST00000335798 MMD2Q8IY49 270 aa15.3■□□□□ 0.04
UBE2E2-201ENST00000335798 DUSP18Q8NEJ0 188 aa15.3■□□□□ 0.04
UBE2E2-201ENST00000335798 DMBX1Q8NFW5 382 aa15.3■□□□□ 0.04
UBE2E2-201ENST00000335798 NOL4LQ96MY1 436 aaPredicted RBP15.3■□□□□ 0.04
UBE2E2-201ENST00000335798 PRR13Q9NZ81 148 aa15.3■□□□□ 0.04
UBE2E2-201ENST00000335798 KCNIP3Q9Y2W7 256 aa15.3■□□□□ 0.04
UBE2E2-201ENST00000335798 TRAV3A0A0B4J244 114 aa15.29■□□□□ 0.04
UBE2E2-201ENST00000335798 AP4M1O00189 453 aa15.29■□□□□ 0.04
UBE2E2-201ENST00000335798 UPK2O00526 184 aa15.29■□□□□ 0.04
UBE2E2-201ENST00000335798 SFT2D2O95562 160 aa15.29■□□□□ 0.04
UBE2E2-201ENST00000335798 ANXA7P20073 488 aaKnown RBP15.29■□□□□ 0.04
UBE2E2-201ENST00000335798 ERVK-16P61578 105 aa15.29■□□□□ 0.04
UBE2E2-201ENST00000335798 TRIM16LQ309B1 348 aa15.29■□□□□ 0.04
UBE2E2-201ENST00000335798 C19orf54Q5BKX5 351 aa15.29■□□□□ 0.04
UBE2E2-201ENST00000335798 FOXRED2Q8IWF2 684 aa15.29■□□□□ 0.04
UBE2E2-201ENST00000335798 SELENOHQ8IZQ5 122 aaKnown RBP15.29■□□□□ 0.04
UBE2E2-201ENST00000335798 STPG2Q8N412 459 aa15.29■□□□□ 0.04
UBE2E2-201ENST00000335798 WFDC12Q8WWY7 111 aa15.29■□□□□ 0.04
UBE2E2-201ENST00000335798 ALX4Q9H161 411 aaPredicted RBP15.29■□□□□ 0.04
UBE2E2-201ENST00000335798 TRAV6A0A075B6T7 132 aa15.28■□□□□ 0.04
UBE2E2-201ENST00000335798 CREBL2O60519 120 aaPredicted RBP15.28■□□□□ 0.04
UBE2E2-201ENST00000335798 OR4E1P0C645 316 aa15.28■□□□□ 0.04
UBE2E2-201ENST00000335798 OR9G9P0C7N8 305 aa15.28■□□□□ 0.04
UBE2E2-201ENST00000335798 CFHR3Q02985 330 aa15.28■□□□□ 0.04
UBE2E2-201ENST00000335798 ARSJQ5FYB0 599 aaPredicted RBP15.28■□□□□ 0.04
UBE2E2-201ENST00000335798 ENKURQ8TC29 256 aa15.28■□□□□ 0.04
UBE2E2-201ENST00000335798 RBPMSQ93062 196 aaKnown RBP15.28■□□□□ 0.04
UBE2E2-201ENST00000335798 IL22RA2Q969J5 263 aa15.28■□□□□ 0.04
UBE2E2-201ENST00000335798 LINC00527Q9UJ94 153 aa15.28■□□□□ 0.04
UBE2E2-201ENST00000335798 NUBP2Q9Y5Y2 271 aa15.28■□□□□ 0.04
UBE2E2-201ENST00000335798 A0A0G2JRQ6 117 aa15.27■□□□□ 0.04
UBE2E2-201ENST00000335798 C9orf170A2RU37 121 aa15.27■□□□□ 0.04
UBE2E2-201ENST00000335798 ANXA3P12429 323 aa15.27■□□□□ 0.04
UBE2E2-201ENST00000335798 VAMP1P23763 118 aa15.27■□□□□ 0.04
UBE2E2-201ENST00000335798 KRTAP10-3P60369 221 aa15.27■□□□□ 0.04
UBE2E2-201ENST00000335798 RPL8P62917 257 aaKnown RBP15.27■□□□□ 0.04
UBE2E2-201ENST00000335798 DHRS2Q13268 280 aa15.27■□□□□ 0.04
UBE2E2-201ENST00000335798 FXYD3Q14802 87 aa15.27■□□□□ 0.04
UBE2E2-201ENST00000335798 ANKRD55Q3KP44 614 aa15.27■□□□□ 0.04
UBE2E2-201ENST00000335798 KLHDC1Q8N7A1 406 aa15.27■□□□□ 0.04
UBE2E2-201ENST00000335798 LRTM2Q8N967 370 aa15.27■□□□□ 0.04
UBE2E2-201ENST00000335798 SGMS2Q8NHU3 365 aa15.27■□□□□ 0.04
UBE2E2-201ENST00000335798 ARPC1AQ92747 370 aa15.27■□□□□ 0.04
UBE2E2-201ENST00000335798 PARP11Q9NR21 331 aa15.27■□□□□ 0.04
UBE2E2-201ENST00000335798 A0A1B0GW64 132 aa15.26■□□□□ 0.03
UBE2E2-201ENST00000335798 H2AFB2P0C5Z0 115 aa15.26■□□□□ 0.03
UBE2E2-201ENST00000335798 MAS1LP35410 378 aa15.26■□□□□ 0.03
UBE2E2-201ENST00000335798 GNB1P62873 340 aa15.26■□□□□ 0.03
UBE2E2-201ENST00000335798 TNXAQ16473 311 aa15.26■□□□□ 0.03
UBE2E2-201ENST00000335798 C10orf55Q5SWW7 151 aa15.26■□□□□ 0.03
UBE2E2-201ENST00000335798 TMEM268Q5VZI3 342 aa15.26■□□□□ 0.03
UBE2E2-201ENST00000335798 SLC35G3Q8N808 338 aa15.26■□□□□ 0.03
UBE2E2-201ENST00000335798 CHPT1Q8WUD6 406 aa15.26■□□□□ 0.03
UBE2E2-201ENST00000335798 SRSF12Q8WXF0 261 aaKnown RBP15.26■□□□□ 0.03
UBE2E2-201ENST00000335798 FAM103A1Q9BTL3 118 aaKnown RBP15.26■□□□□ 0.03
UBE2E2-201ENST00000335798 CGB1A6NKQ9 187 aa15.25■□□□□ 0.03
UBE2E2-201ENST00000335798 E7EUB6 86 aa15.25■□□□□ 0.03
UBE2E2-201ENST00000335798 G3V318 75 aa15.25■□□□□ 0.03
UBE2E2-201ENST00000335798 HLA-AP01891 365 aaKnown RBP15.25■□□□□ 0.03
UBE2E2-201ENST00000335798 MYOD1P15172 320 aa15.25■□□□□ 0.03
UBE2E2-201ENST00000335798 HLA-GP17693 338 aa15.25■□□□□ 0.03
UBE2E2-201ENST00000335798 PPIFP30405 207 aaKnown RBP15.25■□□□□ 0.03
UBE2E2-201ENST00000335798 SRPXP78539 464 aa15.25■□□□□ 0.03
UBE2E2-201ENST00000335798 DCTN2Q13561 401 aaKnown RBP15.25■□□□□ 0.03
UBE2E2-201ENST00000335798 IZUMO4Q1ZYL8 232 aa15.25■□□□□ 0.03
UBE2E2-201ENST00000335798 ASPHD1Q5U4P2 390 aa15.25■□□□□ 0.03
UBE2E2-201ENST00000335798 C10orf99Q6UWK7 81 aa15.25■□□□□ 0.03
UBE2E2-201ENST00000335798 H2BFWTQ7Z2G1 175 aa15.25■□□□□ 0.03
UBE2E2-201ENST00000335798 LYG2Q86SG7 212 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms