RNA–Protein interactions for RNA: ENST00000335760.9

APOBEC3B-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

TSL 1 (best)

Gene APOBEC3B, Length 1,359 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-202ENST00000335760 MRGPRG-AS1Q2M3A8 158 aa11.14□□□□□ -0.63
APOBEC3B-202ENST00000335760 TMEM95Q3KNT9 176 aa11.14□□□□□ -0.63
APOBEC3B-202ENST00000335760 ZNF695Q8IW36 515 aa11.14□□□□□ -0.63
APOBEC3B-202ENST00000335760 SELENOHQ8IZQ5 122 aaKnown RBP11.14□□□□□ -0.63
APOBEC3B-202ENST00000335760 DUSP18Q8NEJ0 188 aa11.14□□□□□ -0.63
APOBEC3B-202ENST00000335760 LINC01006Q8NI28 216 aa11.14□□□□□ -0.63
APOBEC3B-202ENST00000335760 TMEM167AQ8TBQ9 72 aa11.14□□□□□ -0.63
APOBEC3B-202ENST00000335760 ZNF430Q9H8G1 570 aaPredicted RBP11.14□□□□□ -0.63
APOBEC3B-202ENST00000335760 BET1LQ9NYM9 111 aa11.14□□□□□ -0.63
APOBEC3B-202ENST00000335760 CLPSL1A2RUU4 121 aa11.13□□□□□ -0.63
APOBEC3B-202ENST00000335760 KCNAB3O43448 404 aa11.13□□□□□ -0.63
APOBEC3B-202ENST00000335760 ATG12O94817 140 aa11.13□□□□□ -0.63
APOBEC3B-202ENST00000335760 CNIH1O95406 144 aa11.13□□□□□ -0.63
APOBEC3B-202ENST00000335760 CDS2O95674 445 aa11.13□□□□□ -0.63
APOBEC3B-202ENST00000335760 RAB25P57735 213 aa11.13□□□□□ -0.63
APOBEC3B-202ENST00000335760 CX3CL1P78423 397 aa11.13□□□□□ -0.63
APOBEC3B-202ENST00000335760 C4orf46Q504U0 113 aa11.13□□□□□ -0.63
APOBEC3B-202ENST00000335760 TMEM268Q5VZI3 342 aa11.13□□□□□ -0.63
APOBEC3B-202ENST00000335760 ZNF562Q6V9R5 426 aa11.13□□□□□ -0.63
APOBEC3B-202ENST00000335760 H2BFWTQ7Z2G1 175 aa11.13□□□□□ -0.63
APOBEC3B-202ENST00000335760 MMD2Q8IY49 270 aa11.13□□□□□ -0.63
APOBEC3B-202ENST00000335760 OR4A5Q8NH83 315 aa11.13□□□□□ -0.63
APOBEC3B-202ENST00000335760 LHFPL5Q8TAF8 219 aa11.13□□□□□ -0.63
APOBEC3B-202ENST00000335760 CASTOR1Q8WTX7 329 aa11.13□□□□□ -0.63
APOBEC3B-202ENST00000335760 SEC22AQ96IW7 307 aa11.13□□□□□ -0.63
APOBEC3B-202ENST00000335760 TMEM56Q96MV1 263 aa11.13□□□□□ -0.63
APOBEC3B-202ENST00000335760 OR51J1Q9H342 316 aa11.13□□□□□ -0.63
APOBEC3B-202ENST00000335760 TMEM56-RWDD3S4R434 201 aa11.13□□□□□ -0.63
APOBEC3B-202ENST00000335760 TRAV3A0A0B4J244 114 aa11.12□□□□□ -0.63
APOBEC3B-202ENST00000335760 C9orf170A2RU37 121 aa11.12□□□□□ -0.63
APOBEC3B-202ENST00000335760 UPK2O00526 184 aa11.12□□□□□ -0.63
APOBEC3B-202ENST00000335760 CREBL2O60519 120 aaPredicted RBP11.12□□□□□ -0.63
APOBEC3B-202ENST00000335760 ACTL6BO94805 426 aa11.12□□□□□ -0.63
APOBEC3B-202ENST00000335760 IGKV1-5P01602 117 aa11.12□□□□□ -0.63
APOBEC3B-202ENST00000335760 HLA-AP01891 365 aaKnown RBP11.12□□□□□ -0.63
APOBEC3B-202ENST00000335760 SPNP16150 400 aa11.12□□□□□ -0.63
APOBEC3B-202ENST00000335760 AKR1C2P52895 323 aa11.12□□□□□ -0.63
APOBEC3B-202ENST00000335760 DHRS2Q13268 280 aa11.12□□□□□ -0.63
APOBEC3B-202ENST00000335760 FXYD3Q14802 87 aa11.12□□□□□ -0.63
APOBEC3B-202ENST00000335760 TNXAQ16473 311 aa11.12□□□□□ -0.63
APOBEC3B-202ENST00000335760 PLET1Q6UQ28 207 aa11.12□□□□□ -0.63
APOBEC3B-202ENST00000335760 LYG2Q86SG7 212 aa11.12□□□□□ -0.63
APOBEC3B-202ENST00000335760 FOXRED2Q8IWF2 684 aa11.12□□□□□ -0.63
APOBEC3B-202ENST00000335760 LGI3Q8N145 548 aa11.12□□□□□ -0.63
APOBEC3B-202ENST00000335760 RNASE11Q8TAA1 199 aaKnown RBP11.12□□□□□ -0.63
APOBEC3B-202ENST00000335760 ABHD5Q8WTS1 349 aa11.12□□□□□ -0.63
APOBEC3B-202ENST00000335760 RBPMSQ93062 196 aaKnown RBP11.12□□□□□ -0.63
APOBEC3B-202ENST00000335760 PARP11Q9NR21 331 aa11.12□□□□□ -0.63
APOBEC3B-202ENST00000335760 SERTAD4Q9NUC0 356 aa11.12□□□□□ -0.63
APOBEC3B-202ENST00000335760 LINC00527Q9UJ94 153 aa11.12□□□□□ -0.63
APOBEC3B-202ENST00000335760 RNF114Q9Y508 228 aa11.12□□□□□ -0.63
APOBEC3B-202ENST00000335760 A0A1B0GUS0 222 aa11.11□□□□□ -0.63
APOBEC3B-202ENST00000335760 ATP6V0E1O15342 81 aa11.11□□□□□ -0.63
APOBEC3B-202ENST00000335760 SNAPC5O75971 98 aa11.11□□□□□ -0.63
APOBEC3B-202ENST00000335760 IL6RP08887 468 aaPredicted RBP11.11□□□□□ -0.63
APOBEC3B-202ENST00000335760 OR9G9P0C7N8 305 aa11.11□□□□□ -0.63
APOBEC3B-202ENST00000335760 SRPXP78539 464 aa11.11□□□□□ -0.63
APOBEC3B-202ENST00000335760 SSBP2P81877 361 aaPredicted RBP11.11□□□□□ -0.63
APOBEC3B-202ENST00000335760 NDPQ00604 133 aa11.11□□□□□ -0.63
APOBEC3B-202ENST00000335760 ANKRD55Q3KP44 614 aa11.11□□□□□ -0.63
APOBEC3B-202ENST00000335760 AWAT1Q58HT5 328 aa11.11□□□□□ -0.63
APOBEC3B-202ENST00000335760 OR52B4Q8NGK2 314 aa11.11□□□□□ -0.63
APOBEC3B-202ENST00000335760 GRPEL2Q8TAA5 225 aa11.11□□□□□ -0.63
APOBEC3B-202ENST00000335760 ARPC1AQ92747 370 aa11.11□□□□□ -0.63
APOBEC3B-202ENST00000335760 IL22RA2Q969J5 263 aa11.11□□□□□ -0.63
APOBEC3B-202ENST00000335760 RRNAD1Q96FB5 475 aaKnown RBP11.11□□□□□ -0.63
APOBEC3B-202ENST00000335760 NOL4LQ96MY1 436 aaPredicted RBP11.11□□□□□ -0.63
APOBEC3B-202ENST00000335760 ALX4Q9H161 411 aaPredicted RBP11.11□□□□□ -0.63
APOBEC3B-202ENST00000335760 NSG2Q9Y328 171 aa11.11□□□□□ -0.63
APOBEC3B-202ENST00000335760 MMP24Q9Y5R2 645 aa11.11□□□□□ -0.63
APOBEC3B-202ENST00000335760 AP4M1O00189 453 aa11.1□□□□□ -0.63
APOBEC3B-202ENST00000335760 PTTG1O95997 202 aa11.1□□□□□ -0.63
APOBEC3B-202ENST00000335760 MYOD1P15172 320 aa11.1□□□□□ -0.63
APOBEC3B-202ENST00000335760 HLA-GP17693 338 aa11.1□□□□□ -0.63
APOBEC3B-202ENST00000335760 MAS1LP35410 378 aa11.1□□□□□ -0.63
APOBEC3B-202ENST00000335760 MECP2P51608 486 aaKnown RBP11.1□□□□□ -0.63
APOBEC3B-202ENST00000335760 RPL8P62917 257 aaKnown RBP11.1□□□□□ -0.63
APOBEC3B-202ENST00000335760 IZUMO4Q1ZYL8 232 aa11.1□□□□□ -0.63
APOBEC3B-202ENST00000335760 CADM3Q8N126 398 aa11.1□□□□□ -0.63
APOBEC3B-202ENST00000335760 SLC35G3Q8N808 338 aa11.1□□□□□ -0.63
APOBEC3B-202ENST00000335760 FAM103A1Q9BTL3 118 aaKnown RBP11.1□□□□□ -0.63
APOBEC3B-202ENST00000335760 FBXO7Q9Y3I1 522 aa11.1□□□□□ -0.63
APOBEC3B-202ENST00000335760 FBN1P35555 2871 aaKnown RBP11.1□□□□□ -0.63
APOBEC3B-202ENST00000335760 A0A0G2JRQ6 117 aa11.09□□□□□ -0.63
APOBEC3B-202ENST00000335760 INMT-MINDY4F8WBC2 141 aa11.09□□□□□ -0.63
APOBEC3B-202ENST00000335760 OPN1MWP04001 364 aa11.09□□□□□ -0.63
APOBEC3B-202ENST00000335760 IGF1P05019 195 aa11.09□□□□□ -0.63
APOBEC3B-202ENST00000335760 P0C879 139 aa11.09□□□□□ -0.63
APOBEC3B-202ENST00000335760 OPN1MW2P0DN77 364 aa11.09□□□□□ -0.63
APOBEC3B-202ENST00000335760 OPN1MW3P0DN78 364 aa11.09□□□□□ -0.63
APOBEC3B-202ENST00000335760 EGR2P11161 476 aaPredicted RBP11.09□□□□□ -0.63
APOBEC3B-202ENST00000335760 COMPP49747 757 aaPredicted RBP11.09□□□□□ -0.63
APOBEC3B-202ENST00000335760 PROK1P58294 105 aa11.09□□□□□ -0.63
APOBEC3B-202ENST00000335760 OR2B8PP59922 312 aa11.09□□□□□ -0.63
APOBEC3B-202ENST00000335760 C10orf55Q5SWW7 151 aa11.09□□□□□ -0.63
APOBEC3B-202ENST00000335760 LYZL2Q7Z4W2 148 aa11.09□□□□□ -0.63
APOBEC3B-202ENST00000335760 CENPVQ7Z7K6 275 aaPredicted RBP11.09□□□□□ -0.63
APOBEC3B-202ENST00000335760 STPG2Q8N412 459 aa11.09□□□□□ -0.63
APOBEC3B-202ENST00000335760 KLHDC1Q8N7A1 406 aa11.09□□□□□ -0.63
APOBEC3B-202ENST00000335760 LRTM2Q8N967 370 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms