RNA–Protein interactions for RNA: ENST00000331450.9

LRRC28-202, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 752 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-202ENST00000331450 CLCC1Q96S66 551 aa12.65□□□□□ -0.38
LRRC28-202ENST00000331450 C20orf85Q9H1P6 137 aa12.65□□□□□ -0.38
LRRC28-202ENST00000331450 OR51J1Q9H342 316 aa12.65□□□□□ -0.38
LRRC28-202ENST00000331450 ZNF430Q9H8G1 570 aaPredicted RBP12.65□□□□□ -0.38
LRRC28-202ENST00000331450 TMEM140Q9NV12 185 aa12.65□□□□□ -0.38
LRRC28-202ENST00000331450 FLVCR2Q9UPI3 526 aa12.65□□□□□ -0.38
LRRC28-202ENST00000331450 FBXO7Q9Y3I1 522 aa12.65□□□□□ -0.38
LRRC28-202ENST00000331450 TET2Q6N021 2002 aaPredicted RBP12.64□□□□□ -0.39
LRRC28-202ENST00000331450 AP4M1O00189 453 aa12.64□□□□□ -0.39
LRRC28-202ENST00000331450 CDS2O95674 445 aa12.64□□□□□ -0.39
LRRC28-202ENST00000331450 FGF2P09038 288 aa12.64□□□□□ -0.39
LRRC28-202ENST00000331450 P0C879 139 aa12.64□□□□□ -0.39
LRRC28-202ENST00000331450 G6PCP35575 357 aa12.64□□□□□ -0.39
LRRC28-202ENST00000331450 UBE2MP61081 183 aaKnown RBP12.64□□□□□ -0.39
LRRC28-202ENST00000331450 ERVK-16P61578 105 aa12.64□□□□□ -0.39
LRRC28-202ENST00000331450 TMEM187Q14656 261 aa12.64□□□□□ -0.39
LRRC28-202ENST00000331450 ARSJQ5FYB0 599 aaPredicted RBP12.64□□□□□ -0.39
LRRC28-202ENST00000331450 FOXRED2Q8IWF2 684 aa12.64□□□□□ -0.39
LRRC28-202ENST00000331450 MMD2Q8IY49 270 aa12.64□□□□□ -0.39
LRRC28-202ENST00000331450 OR4A5Q8NH83 315 aa12.64□□□□□ -0.39
LRRC28-202ENST00000331450 FAM240BA0A1B0GVZ2 78 aa12.63□□□□□ -0.39
LRRC28-202ENST00000331450 CREBL2O60519 120 aaPredicted RBP12.63□□□□□ -0.39
LRRC28-202ENST00000331450 KRASP01116 189 aa12.63□□□□□ -0.39
LRRC28-202ENST00000331450 IGKV1-5P01602 117 aa12.63□□□□□ -0.39
LRRC28-202ENST00000331450 EGR2P11161 476 aaPredicted RBP12.63□□□□□ -0.39
LRRC28-202ENST00000331450 PPP1R1AQ13522 171 aa12.63□□□□□ -0.39
LRRC28-202ENST00000331450 C19orf54Q5BKX5 351 aa12.63□□□□□ -0.39
LRRC28-202ENST00000331450 STPG2Q8N412 459 aa12.63□□□□□ -0.39
LRRC28-202ENST00000331450 KLHDC1Q8N7A1 406 aa12.63□□□□□ -0.39
LRRC28-202ENST00000331450 DMBX1Q8NFW5 382 aa12.63□□□□□ -0.39
LRRC28-202ENST00000331450 TMEM56Q96MV1 263 aa12.63□□□□□ -0.39
LRRC28-202ENST00000331450 NOL4LQ96MY1 436 aaPredicted RBP12.63□□□□□ -0.39
LRRC28-202ENST00000331450 PALMDQ9NP74 551 aa12.63□□□□□ -0.39
LRRC28-202ENST00000331450 PARP11Q9NR21 331 aa12.63□□□□□ -0.39
LRRC28-202ENST00000331450 NUDT15Q9NV35 164 aa12.63□□□□□ -0.39
LRRC28-202ENST00000331450 KCNIP3Q9Y2W7 256 aa12.63□□□□□ -0.39
LRRC28-202ENST00000331450 TMEM56-RWDD3S4R434 201 aa12.63□□□□□ -0.39
LRRC28-202ENST00000331450 TNCP24821 2201 aa12.63□□□□□ -0.39
LRRC28-202ENST00000331450 TRAV3A0A0B4J244 114 aa12.62□□□□□ -0.39
LRRC28-202ENST00000331450 UPK2O00526 184 aa12.62□□□□□ -0.39
LRRC28-202ENST00000331450 MAS1LP35410 378 aa12.62□□□□□ -0.39
LRRC28-202ENST00000331450 MECP2P51608 486 aaKnown RBP12.62□□□□□ -0.39
LRRC28-202ENST00000331450 DEFA1P59665 94 aa12.62□□□□□ -0.39
LRRC28-202ENST00000331450 DEFA3P59666 94 aa12.62□□□□□ -0.39
LRRC28-202ENST00000331450 KRTAP10-3P60369 221 aa12.62□□□□□ -0.39
LRRC28-202ENST00000331450 CFHR3Q02985 330 aa12.62□□□□□ -0.39
LRRC28-202ENST00000331450 FXYD3Q14802 87 aa12.62□□□□□ -0.39
LRRC28-202ENST00000331450 TNXAQ16473 311 aa12.62□□□□□ -0.39
LRRC28-202ENST00000331450 TRIM16LQ309B1 348 aa12.62□□□□□ -0.39
LRRC28-202ENST00000331450 DUSP18Q8NEJ0 188 aa12.62□□□□□ -0.39
LRRC28-202ENST00000331450 CHPT1Q8WUD6 406 aa12.62□□□□□ -0.39
LRRC28-202ENST00000331450 ARPC1AQ92747 370 aa12.62□□□□□ -0.39
LRRC28-202ENST00000331450 RBPMSQ93062 196 aaKnown RBP12.62□□□□□ -0.39
LRRC28-202ENST00000331450 IL22RA2Q969J5 263 aa12.62□□□□□ -0.39
LRRC28-202ENST00000331450 ALX4Q9H161 411 aaPredicted RBP12.62□□□□□ -0.39
LRRC28-202ENST00000331450 LINC00527Q9UJ94 153 aa12.62□□□□□ -0.39
LRRC28-202ENST00000331450 SFT2D2O95562 160 aa12.61□□□□□ -0.39
LRRC28-202ENST00000331450 OR9G9P0C7N8 305 aa12.61□□□□□ -0.39
LRRC28-202ENST00000331450 ANXA7P20073 488 aaKnown RBP12.61□□□□□ -0.39
LRRC28-202ENST00000331450 VAMP1P23763 118 aa12.61□□□□□ -0.39
LRRC28-202ENST00000331450 RPL8P62917 257 aaKnown RBP12.61□□□□□ -0.39
LRRC28-202ENST00000331450 C10orf55Q5SWW7 151 aa12.61□□□□□ -0.39
LRRC28-202ENST00000331450 TMEM268Q5VZI3 342 aa12.61□□□□□ -0.39
LRRC28-202ENST00000331450 NRARPQ7Z6K4 114 aa12.61□□□□□ -0.39
LRRC28-202ENST00000331450 SELENOHQ8IZQ5 122 aaKnown RBP12.61□□□□□ -0.39
LRRC28-202ENST00000331450 SGMS2Q8NHU3 365 aa12.61□□□□□ -0.39
LRRC28-202ENST00000331450 SRSF12Q8WXF0 261 aaKnown RBP12.61□□□□□ -0.39
LRRC28-202ENST00000331450 PRR13Q9NZ81 148 aa12.61□□□□□ -0.39
LRRC28-202ENST00000331450 NUBP2Q9Y5Y2 271 aa12.61□□□□□ -0.39
LRRC28-202ENST00000331450 TENM1Q9UKZ4 2725 aa12.61□□□□□ -0.39
LRRC28-202ENST00000331450 TRAV6A0A075B6T7 132 aa12.6□□□□□ -0.39
LRRC28-202ENST00000331450 A0A0G2JRQ6 117 aa12.6□□□□□ -0.39
LRRC28-202ENST00000331450 OR4E1P0C645 316 aa12.6□□□□□ -0.39
LRRC28-202ENST00000331450 ANXA3P12429 323 aa12.6□□□□□ -0.39
LRRC28-202ENST00000331450 HLA-GP17693 338 aa12.6□□□□□ -0.39
LRRC28-202ENST00000331450 PPIFP30405 207 aaKnown RBP12.6□□□□□ -0.39
LRRC28-202ENST00000331450 AKR1C2P52895 323 aa12.6□□□□□ -0.39
LRRC28-202ENST00000331450 GNB1P62873 340 aa12.6□□□□□ -0.39
LRRC28-202ENST00000331450 SRPXP78539 464 aa12.6□□□□□ -0.39
LRRC28-202ENST00000331450 C10orf99Q6UWK7 81 aa12.6□□□□□ -0.39
LRRC28-202ENST00000331450 H2BFWTQ7Z2G1 175 aa12.6□□□□□ -0.39
LRRC28-202ENST00000331450 LRTM2Q8N967 370 aa12.6□□□□□ -0.39
LRRC28-202ENST00000331450 GRPEL2Q8TAA5 225 aa12.6□□□□□ -0.39
LRRC28-202ENST00000331450 ENKURQ8TC29 256 aa12.6□□□□□ -0.39
LRRC28-202ENST00000331450 FAM103A1Q9BTL3 118 aaKnown RBP12.6□□□□□ -0.39
LRRC28-202ENST00000331450 TRAV41A0A0B4J266 112 aa12.59□□□□□ -0.39
LRRC28-202ENST00000331450 A0A1B0GW64 132 aa12.59□□□□□ -0.39
LRRC28-202ENST00000331450 C9orf170A2RU37 121 aa12.59□□□□□ -0.39
LRRC28-202ENST00000331450 PSMB11A5LHX3 300 aa12.59□□□□□ -0.39
LRRC28-202ENST00000331450 CGB1A6NKQ9 187 aa12.59□□□□□ -0.39
LRRC28-202ENST00000331450 C15orf61A6NNL5 157 aa12.59□□□□□ -0.39
LRRC28-202ENST00000331450 E7EUB6 86 aa12.59□□□□□ -0.39
LRRC28-202ENST00000331450 G3V318 75 aa12.59□□□□□ -0.39
LRRC28-202ENST00000331450 HAX1O00165 279 aa12.59□□□□□ -0.39
LRRC28-202ENST00000331450 ATG12O94817 140 aa12.59□□□□□ -0.39
LRRC28-202ENST00000331450 CNIH1O95406 144 aa12.59□□□□□ -0.39
LRRC28-202ENST00000331450 HLA-AP01891 365 aaKnown RBP12.59□□□□□ -0.39
LRRC28-202ENST00000331450 H2AFB2P0C5Z0 115 aa12.59□□□□□ -0.39
LRRC28-202ENST00000331450 MYOD1P15172 320 aa12.59□□□□□ -0.39
LRRC28-202ENST00000331450 DHRS2Q13268 280 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms