RNA–Protein interactions for RNA: ENST00000323668.11

TCOF1-201, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCOF1, Length 4,832 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-201ENST00000323668 MYO7BQ6PIF6 2116 aa12.41□□□□□ -0.42
TCOF1-201ENST00000323668 LEAP2Q969E1 77 aa12.41□□□□□ -0.42
TCOF1-201ENST00000323668 TIMD4Q96H15 378 aa12.41□□□□□ -0.42
TCOF1-201ENST00000323668 RAMP3O60896 148 aa12.41□□□□□ -0.42
TCOF1-201ENST00000323668 CBLN1P23435 193 aa12.41□□□□□ -0.42
TCOF1-201ENST00000323668 STPG3Q8N7X2 389 aa12.41□□□□□ -0.42
TCOF1-201ENST00000323668 PAXXQ9BUH6 204 aa12.41□□□□□ -0.42
TCOF1-201ENST00000323668 AHRRA9YTQ3 701 aa12.41□□□□□ -0.42
TCOF1-201ENST00000323668 HLA-DQA1P01909 254 aa12.41□□□□□ -0.42
TCOF1-201ENST00000323668 HTR1DP28221 377 aa12.41□□□□□ -0.42
TCOF1-201ENST00000323668 RNF151Q2KHN1 245 aa12.41□□□□□ -0.42
TCOF1-201ENST00000323668 PCSK4Q6UW60 755 aa12.41□□□□□ -0.42
TCOF1-201ENST00000323668 WDYHV1Q96HA8 205 aa12.41□□□□□ -0.42
TCOF1-201ENST00000323668 SFXN3Q9BWM7 321 aa12.41□□□□□ -0.42
TCOF1-201ENST00000323668 CELA3BP08861 270 aa12.41□□□□□ -0.42
TCOF1-201ENST00000323668 TNXAQ16473 311 aa12.41□□□□□ -0.42
TCOF1-201ENST00000323668 RPP25LQ8N5L8 163 aaKnown RBP12.41□□□□□ -0.42
TCOF1-201ENST00000323668 WDR31Q8NA23 367 aa12.41□□□□□ -0.42
TCOF1-201ENST00000323668 OR51G1Q8NGK1 321 aa12.41□□□□□ -0.42
TCOF1-201ENST00000323668 RPEQ96AT9 228 aa12.41□□□□□ -0.42
TCOF1-201ENST00000323668 HSPB7Q9UBY9 170 aa12.41□□□□□ -0.42
TCOF1-201ENST00000323668 DIDO1Q9BTC0 2240 aaKnown RBP12.41□□□□□ -0.42
TCOF1-201ENST00000323668 REG1BP48304 166 aa12.4□□□□□ -0.42
TCOF1-201ENST00000323668 B3GALT5-AS1P59052 145 aa12.4□□□□□ -0.42
TCOF1-201ENST00000323668 RPL39P5Q59GN2 51 aa12.4□□□□□ -0.42
TCOF1-201ENST00000323668 ATP1A1-AS1Q5TC04 95 aa12.4□□□□□ -0.42
TCOF1-201ENST00000323668 OR4F17Q8NGA8 305 aa12.4□□□□□ -0.42
TCOF1-201ENST00000323668 OR2D3Q8NGH3 330 aa12.4□□□□□ -0.42
TCOF1-201ENST00000323668 TMEM170AQ8WVE7 144 aa12.4□□□□□ -0.42
TCOF1-201ENST00000323668 THADAQ6YHU6 1953 aa12.4□□□□□ -0.42
TCOF1-201ENST00000323668 NKX2-8O15522 239 aa12.4□□□□□ -0.42
TCOF1-201ENST00000323668 IGKV1-5P01602 117 aa12.4□□□□□ -0.42
TCOF1-201ENST00000323668 P01737 135 aa12.4□□□□□ -0.42
TCOF1-201ENST00000323668 SOD3P08294 240 aa12.4□□□□□ -0.42
TCOF1-201ENST00000323668 LINC00869P0C866 280 aa12.4□□□□□ -0.42
TCOF1-201ENST00000323668 CD82P27701 267 aa12.4□□□□□ -0.42
TCOF1-201ENST00000323668 ZNRF1Q8ND25 227 aa12.4□□□□□ -0.42
TCOF1-201ENST00000323668 SAP30LQ9HAJ7 183 aa12.4□□□□□ -0.42
TCOF1-201ENST00000323668 CACNA1GO43497 2377 aa12.4□□□□□ -0.42
TCOF1-201ENST00000323668 IQCF6A8MYZ5 107 aa12.4□□□□□ -0.42
TCOF1-201ENST00000323668 PTTG1IPP53801 180 aa12.4□□□□□ -0.42
TCOF1-201ENST00000323668 GFRA1P56159 465 aa12.4□□□□□ -0.42
TCOF1-201ENST00000323668 JOSD1Q15040 202 aaPredicted RBP12.4□□□□□ -0.42
TCOF1-201ENST00000323668 PERPQ96FX8 193 aa12.4□□□□□ -0.42
TCOF1-201ENST00000323668 NABP2Q9BQ15 211 aa12.4□□□□□ -0.42
TCOF1-201ENST00000323668 DCTN5Q9BTE1 182 aa12.4□□□□□ -0.42
TCOF1-201ENST00000323668 C1QTNF9BB2RNN3 333 aa12.4□□□□□ -0.43
TCOF1-201ENST00000323668 COL5A1-AS1Q5SY13 56 aa12.4□□□□□ -0.43
TCOF1-201ENST00000323668 ISLRO14498 428 aa12.39□□□□□ -0.43
TCOF1-201ENST00000323668 KLK10O43240 276 aa12.39□□□□□ -0.43
TCOF1-201ENST00000323668 IL6RP08887 468 aaPredicted RBP12.39□□□□□ -0.43
TCOF1-201ENST00000323668 C8orf88P0DMB2 117 aa12.39□□□□□ -0.43
TCOF1-201ENST00000323668 CCL8P80075 99 aa12.39□□□□□ -0.43
TCOF1-201ENST00000323668 KIAA1644Q3SXP7 199 aa12.39□□□□□ -0.43
TCOF1-201ENST00000323668 PRRX1P54821 245 aa12.39□□□□□ -0.43
TCOF1-201ENST00000323668 LYZP61626 148 aa12.39□□□□□ -0.43
TCOF1-201ENST00000323668 HERPUD1Q15011 391 aa12.39□□□□□ -0.43
TCOF1-201ENST00000323668 OR4C5Q8NGB2 326 aa12.39□□□□□ -0.43
TCOF1-201ENST00000323668 OR4B1Q8NGF8 309 aa12.39□□□□□ -0.43
TCOF1-201ENST00000323668 HIF1ANQ9NWT6 349 aa12.39□□□□□ -0.43
TCOF1-201ENST00000323668 TICRRQ7Z2Z1 1910 aa12.39□□□□□ -0.43
TCOF1-201ENST00000323668 SNRPCP09234 159 aaKnown RBP12.39□□□□□ -0.43
TCOF1-201ENST00000323668 FXYD3Q14802 87 aa12.39□□□□□ -0.43
TCOF1-201ENST00000323668 GFRALQ6UXV0 394 aa12.39□□□□□ -0.43
TCOF1-201ENST00000323668 PRSS3P2Q8NHM4 247 aa12.39□□□□□ -0.43
TCOF1-201ENST00000323668 MS4A5Q9H3V2 200 aa12.39□□□□□ -0.43
TCOF1-201ENST00000323668 NUP210Q8TEM1 1887 aaPredicted RBP12.39□□□□□ -0.43
TCOF1-201ENST00000323668 A0A0G2JRQ6 117 aa12.39□□□□□ -0.43
TCOF1-201ENST00000323668 COL8A1P27658 744 aa12.39□□□□□ -0.43
TCOF1-201ENST00000323668 SELENOTP62341 195 aa12.39□□□□□ -0.43
TCOF1-201ENST00000323668 ELOVL1Q9BW60 279 aa12.39□□□□□ -0.43
TCOF1-201ENST00000323668 AAMDCQ9H7C9 122 aa12.39□□□□□ -0.43
TCOF1-201ENST00000323668 SLC25A10Q9UBX3 287 aaPredicted RBP12.39□□□□□ -0.43
TCOF1-201ENST00000323668 OBSL1O75147 1896 aa12.38□□□□□ -0.43
TCOF1-201ENST00000323668 TRBV6-6A0A0A6YYG2 114 aa12.38□□□□□ -0.43
TCOF1-201ENST00000323668 M0R296 226 aa12.38□□□□□ -0.43
TCOF1-201ENST00000323668 RPL8P62917 257 aaKnown RBP12.38□□□□□ -0.43
TCOF1-201ENST00000323668 BMPERQ8N8U9 685 aa12.38□□□□□ -0.43
TCOF1-201ENST00000323668 OR5R1Q8NH85 324 aa12.38□□□□□ -0.43
TCOF1-201ENST00000323668 IGLV3-1P01715 115 aa12.38□□□□□ -0.43
TCOF1-201ENST00000323668 CECR9P0C854 216 aa12.38□□□□□ -0.43
TCOF1-201ENST00000323668 OR2T6Q8NHC8 308 aa12.38□□□□□ -0.43
TCOF1-201ENST00000323668 NDFIP1Q9BT67 221 aa12.38□□□□□ -0.43
TCOF1-201ENST00000323668 TMEM191AQ9H0A3 160 aa12.38□□□□□ -0.43
TCOF1-201ENST00000323668 ZNF146Q15072 292 aa12.38□□□□□ -0.43
TCOF1-201ENST00000323668 Q6ZRM9 215 aa12.38□□□□□ -0.43
TCOF1-201ENST00000323668 RIF1Q5UIP0 2472 aaKnown RBP12.38□□□□□ -0.43
TCOF1-201ENST00000323668 SCO2A0A1W2PP80 73 aa12.37□□□□□ -0.43
TCOF1-201ENST00000323668 CA2P00918 260 aa12.37□□□□□ -0.43
TCOF1-201ENST00000323668 IGHV1-2P23083 117 aa12.37□□□□□ -0.43
TCOF1-201ENST00000323668 NUBP1P53384 320 aa12.37□□□□□ -0.43
TCOF1-201ENST00000323668 C19orf24Q9BVV8 132 aa12.37□□□□□ -0.43
TCOF1-201ENST00000323668 DNAJC4Q9NNZ3 241 aa12.37□□□□□ -0.43
TCOF1-201ENST00000323668 TRBV9A0A0B4J1U6 114 aa12.37□□□□□ -0.43
TCOF1-201ENST00000323668 SLC17A3O00476 420 aa12.37□□□□□ -0.43
TCOF1-201ENST00000323668 TMEM50AO95807 157 aa12.37□□□□□ -0.43
TCOF1-201ENST00000323668 Q56UQ5 140 aa12.37□□□□□ -0.43
TCOF1-201ENST00000323668 CENPWQ5EE01 88 aa12.37□□□□□ -0.43
TCOF1-201ENST00000323668 RRHO14718 337 aa12.37□□□□□ -0.43
TCOF1-201ENST00000323668 CSN3P07498 182 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms