RNA–Protein interactions for RNA: ENST00000323144.11

TPM3-204, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,088 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-204ENST00000323144 ARL6IP1Q15041 203 aa9.34□□□□□ -0.91
TPM3-204ENST00000323144 CD300EQ496F6 205 aaPredicted RBP9.34□□□□□ -0.91
TPM3-204ENST00000323144 CNIH2Q6PI25 160 aa9.34□□□□□ -0.91
TPM3-204ENST00000323144 SSX9Q7RTT3 188 aa9.34□□□□□ -0.91
TPM3-204ENST00000323144 OR13F1Q8NGS4 319 aa9.34□□□□□ -0.91
TPM3-204ENST00000323144 FCGR1BQ92637 280 aa9.34□□□□□ -0.91
TPM3-204ENST00000323144 SNAPC3Q92966 411 aa9.34□□□□□ -0.91
TPM3-204ENST00000323144 FYTTD1Q96QD9 318 aaKnown RBP9.34□□□□□ -0.91
TPM3-204ENST00000323144 SPIN2AQ99865 258 aa9.34□□□□□ -0.91
TPM3-204ENST00000323144 SPIN2BQ9BPZ2 258 aa9.34□□□□□ -0.91
TPM3-204ENST00000323144 SPATA25Q9BR10 227 aa9.34□□□□□ -0.91
TPM3-204ENST00000323144 SIGLEC8Q9NYZ4 499 aa9.34□□□□□ -0.91
TPM3-204ENST00000323144 PRELID3BQ9Y3B1 194 aa9.34□□□□□ -0.91
TPM3-204ENST00000323144 DMRT1Q9Y5R6 373 aa9.34□□□□□ -0.91
TPM3-204ENST00000323144 LOC100506127A0A0U1RQW1 187 aa9.33□□□□□ -0.92
TPM3-204ENST00000323144 H0Y980 276 aa9.33□□□□□ -0.92
TPM3-204ENST00000323144 MRPS14O60783 128 aaKnown RBP9.33□□□□□ -0.92
TPM3-204ENST00000323144 CD7P09564 240 aa9.33□□□□□ -0.92
TPM3-204ENST00000323144 TGFBR1P36897 503 aa9.33□□□□□ -0.92
TPM3-204ENST00000323144 MECP2P51608 486 aaKnown RBP9.33□□□□□ -0.92
TPM3-204ENST00000323144 ARPC4P59998 168 aa9.33□□□□□ -0.92
TPM3-204ENST00000323144 ATP5G2Q06055 141 aa9.33□□□□□ -0.92
TPM3-204ENST00000323144 TIMM50Q3ZCQ8 353 aa9.33□□□□□ -0.92
TPM3-204ENST00000323144 ZNF773Q6PK81 442 aa9.33□□□□□ -0.92
TPM3-204ENST00000323144 TTC9CQ8N5M4 171 aa9.33□□□□□ -0.92
TPM3-204ENST00000323144 NECAP1Q8NC96 275 aa9.33□□□□□ -0.92
TPM3-204ENST00000323144 TMEM167AQ8TBQ9 72 aa9.33□□□□□ -0.92
TPM3-204ENST00000323144 DYNLRB2Q8TF09 96 aa9.33□□□□□ -0.92
TPM3-204ENST00000323144 SECTM1Q8WVN6 248 aa9.33□□□□□ -0.92
TPM3-204ENST00000323144 HSD17B10Q99714 261 aaKnown RBP9.33□□□□□ -0.92
TPM3-204ENST00000323144 DCSTAMPQ9H295 470 aa9.33□□□□□ -0.92
TPM3-204ENST00000323144 CCL28Q9NRJ3 127 aa9.33□□□□□ -0.92
TPM3-204ENST00000323144 PEMTQ9UBM1 199 aa9.33□□□□□ -0.92
TPM3-204ENST00000323144 ZNF257Q9Y2Q1 563 aa9.33□□□□□ -0.92
TPM3-204ENST00000323144 ALMS1Q8TCU4 4167 aa9.32□□□□□ -0.92
TPM3-204ENST00000323144 DNAH1Q9P2D7 4330 aa9.32□□□□□ -0.92
TPM3-204ENST00000323144 MEIS3P1A6NDR6 274 aa9.32□□□□□ -0.92
TPM3-204ENST00000323144 MFSD2BA6NFX1 497 aa9.32□□□□□ -0.92
TPM3-204ENST00000323144 C2orf70A6NJV1 201 aa9.32□□□□□ -0.92
TPM3-204ENST00000323144 NPIPB5A8MRT5 1133 aa9.32□□□□□ -0.92
TPM3-204ENST00000323144 SCGNO76038 276 aa9.32□□□□□ -0.92
TPM3-204ENST00000323144 NDUFB8O95169 186 aa9.32□□□□□ -0.92
TPM3-204ENST00000323144 ZNF735P0CB33 412 aa9.32□□□□□ -0.92
TPM3-204ENST00000323144 NEDD8Q15843 81 aa9.32□□□□□ -0.92
TPM3-204ENST00000323144 TPRA1Q86W33 373 aa9.32□□□□□ -0.92
TPM3-204ENST00000323144 BEST4Q8NFU0 473 aa9.32□□□□□ -0.92
TPM3-204ENST00000323144 WDR89Q96FK6 387 aaPredicted RBP9.32□□□□□ -0.92
TPM3-204ENST00000323144 FANCD2OSQ96PS1 177 aa9.32□□□□□ -0.92
TPM3-204ENST00000323144 OR2A7Q96R45 310 aa9.32□□□□□ -0.92
TPM3-204ENST00000323144 NEURL2Q9BR09 285 aa9.32□□□□□ -0.92
TPM3-204ENST00000323144 CENPOQ9BU64 300 aa9.32□□□□□ -0.92
TPM3-204ENST00000323144 FBXL7Q9UJT9 491 aa9.32□□□□□ -0.92
TPM3-204ENST00000323144 SSR3Q9UNL2 185 aa9.32□□□□□ -0.92
TPM3-204ENST00000323144 CEPT1Q9Y6K0 416 aa9.32□□□□□ -0.92
TPM3-204ENST00000323144 TRAV18A0A075B6X5 111 aa9.31□□□□□ -0.92
TPM3-204ENST00000323144 TRAV3A0A0B4J244 114 aa9.31□□□□□ -0.92
TPM3-204ENST00000323144 SULT1C2O00338 296 aa9.31□□□□□ -0.92
TPM3-204ENST00000323144 PPYP01298 95 aa9.31□□□□□ -0.92
TPM3-204ENST00000323144 CTXN2P0C2S0 81 aa9.31□□□□□ -0.92
TPM3-204ENST00000323144 FXYD4P59646 89 aa9.31□□□□□ -0.92
TPM3-204ENST00000323144 IDNKQ5T6J7 187 aa9.31□□□□□ -0.92
TPM3-204ENST00000323144 OR4A47Q6IF82 309 aa9.31□□□□□ -0.92
TPM3-204ENST00000323144 CLEC19AQ6UXS0 136 aa9.31□□□□□ -0.92
TPM3-204ENST00000323144 TMEM17Q86X19 198 aa9.31□□□□□ -0.92
TPM3-204ENST00000323144 MFSD4AQ8N468 514 aa9.31□□□□□ -0.92
TPM3-204ENST00000323144 DEFB125Q8N687 156 aa9.31□□□□□ -0.92
TPM3-204ENST00000323144 OR2K2Q8NGT1 345 aa9.31□□□□□ -0.92
TPM3-204ENST00000323144 TUBA4BQ9H853 241 aa9.31□□□□□ -0.92
TPM3-204ENST00000323144 ZC4H2Q9NQZ6 224 aa9.31□□□□□ -0.92
TPM3-204ENST00000323144 ETV7Q9Y603 341 aa9.31□□□□□ -0.92
TPM3-204ENST00000323144 EPPK1P58107 5090 aaKnown RBP9.3□□□□□ -0.92
TPM3-204ENST00000323144 IGLV11-55A0A075B6I3 123 aa9.3□□□□□ -0.92
TPM3-204ENST00000323144 TMEM213A2RRL7 107 aa9.3□□□□□ -0.92
TPM3-204ENST00000323144 DPPA5A6NC42 116 aa9.3□□□□□ -0.92
TPM3-204ENST00000323144 RBMY1BA6NDE4 496 aaKnown RBP9.3□□□□□ -0.92
TPM3-204ENST00000323144 RBMY1EA6NEQ0 496 aaKnown RBP9.3□□□□□ -0.92
TPM3-204ENST00000323144 ZNF785A8K8V0 405 aa9.3□□□□□ -0.92
TPM3-204ENST00000323144 SLC22A5O76082 557 aa9.3□□□□□ -0.92
TPM3-204ENST00000323144 S1PR2O95136 353 aa9.3□□□□□ -0.92
TPM3-204ENST00000323144 OR2C1O95371 312 aa9.3□□□□□ -0.92
TPM3-204ENST00000323144 RBMY1DP0C7P1 496 aaKnown RBP9.3□□□□□ -0.92
TPM3-204ENST00000323144 FOLR2P14207 255 aa9.3□□□□□ -0.92
TPM3-204ENST00000323144 CTRB1P17538 263 aa9.3□□□□□ -0.92
TPM3-204ENST00000323144 HLA-GP17693 338 aa9.3□□□□□ -0.92
TPM3-204ENST00000323144 PSMB6P28072 239 aa9.3□□□□□ -0.92
TPM3-204ENST00000323144 FCGR2CP31995 323 aa9.3□□□□□ -0.92
TPM3-204ENST00000323144 ARL3P36405 182 aa9.3□□□□□ -0.92
TPM3-204ENST00000323144 RPL8P62917 257 aaKnown RBP9.3□□□□□ -0.92
TPM3-204ENST00000323144 TATDN3Q17R31 274 aa9.3□□□□□ -0.92
TPM3-204ENST00000323144 CTRB2Q6GPI1 263 aa9.3□□□□□ -0.92
TPM3-204ENST00000323144 LINC00322Q6ZN03 302 aaPredicted RBP9.3□□□□□ -0.92
TPM3-204ENST00000323144 ZNF66Q6ZN08 573 aa9.3□□□□□ -0.92
TPM3-204ENST00000323144 ZNF818PQ6ZRF7 136 aa9.3□□□□□ -0.92
TPM3-204ENST00000323144 SLC25A42Q86VD7 318 aa9.3□□□□□ -0.92
TPM3-204ENST00000323144 HOGA1Q86XE5 327 aa9.3□□□□□ -0.92
TPM3-204ENST00000323144 TMEM61Q8N0U2 210 aa9.3□□□□□ -0.92
TPM3-204ENST00000323144 OR51H1Q8NH63 302 aa9.3□□□□□ -0.92
TPM3-204ENST00000323144 VSTM2AQ8TAG5 236 aa9.3□□□□□ -0.92
TPM3-204ENST00000323144 FXYD6Q9H0Q3 95 aa9.3□□□□□ -0.92
TPM3-204ENST00000323144 HIPK2Q9H2X6 1198 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms