RNA–Protein interactions for RNA: ENST00000305409.2

SCG2-201, Transcript of secretogranin II, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCG2, Length 2,576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2-201ENST00000305409 H7C2Y5 167 aa9.31□□□□□ -0.92
SCG2-201ENST00000305409 IGKV1D-33P01593 117 aa9.31□□□□□ -0.92
SCG2-201ENST00000305409 IGKV1-33P01594 117 aa9.31□□□□□ -0.92
SCG2-201ENST00000305409 DAOP14920 347 aa9.31□□□□□ -0.92
SCG2-201ENST00000305409 ZNF672Q499Z4 452 aaPredicted RBP9.31□□□□□ -0.92
SCG2-201ENST00000305409 RXFP4Q8TDU9 374 aa9.31□□□□□ -0.92
SCG2-201ENST00000305409 NCOR1P1Q9H4R4 102 aa9.31□□□□□ -0.92
SCG2-201ENST00000305409 VPS13CQ709C8 3753 aa9.3□□□□□ -0.92
SCG2-201ENST00000305409 PCP4L1A6NKN8 68 aa9.3□□□□□ -0.92
SCG2-201ENST00000305409 FGF7P21781 194 aa9.3□□□□□ -0.92
SCG2-201ENST00000305409 OR13D1Q8NGV5 346 aa9.3□□□□□ -0.92
SCG2-201ENST00000305409 GAL3ST2Q9H3Q3 398 aa9.3□□□□□ -0.92
SCG2-201ENST00000305409 SLC35D1Q9NTN3 355 aa9.3□□□□□ -0.92
SCG2-201ENST00000305409 WNK2Q9Y3S1 2297 aa9.3□□□□□ -0.92
SCG2-201ENST00000305409 IGHV3-72A0A0B4J1Y9 119 aa9.3□□□□□ -0.92
SCG2-201ENST00000305409 HOXA1P49639 335 aaPredicted RBP9.3□□□□□ -0.92
SCG2-201ENST00000305409 THBS3P49746 956 aa9.3□□□□□ -0.92
SCG2-201ENST00000305409 PEA15Q15121 130 aa9.3□□□□□ -0.92
SCG2-201ENST00000305409 EFNB3Q15768 340 aa9.3□□□□□ -0.92
SCG2-201ENST00000305409 FBXL19-AS1Q494R0 122 aa9.3□□□□□ -0.92
SCG2-201ENST00000305409 ACSM6Q6P461 480 aa9.3□□□□□ -0.92
SCG2-201ENST00000305409 HEPN1Q6WQI6 88 aa9.3□□□□□ -0.92
SCG2-201ENST00000305409 SSX8Q7RTT4 187 aa9.3□□□□□ -0.92
SCG2-201ENST00000305409 OR10X1Q8NGY0 326 aa9.3□□□□□ -0.92
SCG2-201ENST00000305409 TMEM170AQ8WVE7 144 aa9.3□□□□□ -0.92
SCG2-201ENST00000305409 IGFBPL1Q8WX77 278 aa9.3□□□□□ -0.92
SCG2-201ENST00000305409 PRORYQ9H606 182 aa9.3□□□□□ -0.92
SCG2-201ENST00000305409 RAB9BQ9NP90 201 aa9.3□□□□□ -0.92
SCG2-201ENST00000305409 GNG13Q9P2W3 67 aa9.3□□□□□ -0.92
SCG2-201ENST00000305409 TCF19Q9Y242 345 aa9.3□□□□□ -0.92
SCG2-201ENST00000305409 MAP1AP78559 2803 aaPredicted RBP9.3□□□□□ -0.92
SCG2-201ENST00000305409 ABCA1O95477 2261 aa9.3□□□□□ -0.92
SCG2-201ENST00000305409 RBFOX3A6NFN3 312 aa9.29□□□□□ -0.92
SCG2-201ENST00000305409 ZFP92A6NM28 416 aa9.29□□□□□ -0.92
SCG2-201ENST00000305409 PPIHO43447 177 aaKnown RBP9.29□□□□□ -0.92
SCG2-201ENST00000305409 SOD3P08294 240 aa9.29□□□□□ -0.92
SCG2-201ENST00000305409 RCC1LQ96I51 464 aaKnown RBP9.29□□□□□ -0.92
SCG2-201ENST00000305409 LINC00574Q9H8X3 128 aa9.29□□□□□ -0.92
SCG2-201ENST00000305409 A0A1W2PPR1 153 aa9.29□□□□□ -0.92
SCG2-201ENST00000305409 M0R036 132 aa9.29□□□□□ -0.92
SCG2-201ENST00000305409 SNRNP70P08621 437 aaKnown RBP9.29□□□□□ -0.92
SCG2-201ENST00000305409 SPCS3P61009 180 aa9.29□□□□□ -0.92
SCG2-201ENST00000305409 GCSAMLQ5JQS6 135 aa9.29□□□□□ -0.92
SCG2-201ENST00000305409 FAM122AQ96E09 287 aa9.29□□□□□ -0.92
SCG2-201ENST00000305409 TMPRSS5Q9H3S3 457 aa9.29□□□□□ -0.92
SCG2-201ENST00000305409 SLC25A22Q9H936 323 aa9.29□□□□□ -0.92
SCG2-201ENST00000305409 SPG11Q96JI7 2443 aa9.29□□□□□ -0.92
SCG2-201ENST00000305409 RBFOX2O43251 390 aaKnown RBP eCLIP9.28□□□□□ -0.92
SCG2-201ENST00000305409 SNAPINO95295 136 aa9.28□□□□□ -0.92
SCG2-201ENST00000305409 IFNA4P05014 189 aa9.28□□□□□ -0.92
SCG2-201ENST00000305409 TLE4Q04727 773 aa9.28□□□□□ -0.92
SCG2-201ENST00000305409 MEF2CQ06413 473 aaPredicted RBP9.28□□□□□ -0.92
SCG2-201ENST00000305409 RPP25LQ8N5L8 163 aaKnown RBP9.28□□□□□ -0.92
SCG2-201ENST00000305409 CLRN3Q8NCR9 226 aa9.28□□□□□ -0.92
SCG2-201ENST00000305409 CIB3Q96Q77 187 aaPredicted RBP9.28□□□□□ -0.92
SCG2-201ENST00000305409 TMEM147Q9BVK8 224 aa9.28□□□□□ -0.92
SCG2-201ENST00000305409 PUS1Q9Y606 427 aaKnown RBP eCLIP9.28□□□□□ -0.92
SCG2-201ENST00000305409 ITGB1BP1O14713 200 aa9.28□□□□□ -0.92
SCG2-201ENST00000305409 GNLYP22749 145 aa9.28□□□□□ -0.92
SCG2-201ENST00000305409 PAX6P26367 422 aa9.28□□□□□ -0.92
SCG2-201ENST00000305409 VDAC2P45880 294 aaPredicted RBP9.28□□□□□ -0.92
SCG2-201ENST00000305409 RITA1Q96K30 269 aa9.28□□□□□ -0.92
SCG2-201ENST00000305409 PBDC1Q9BVG4 233 aa9.28□□□□□ -0.92
SCG2-201ENST00000305409 C15orf61A6NNL5 157 aa9.27□□□□□ -0.92
SCG2-201ENST00000305409 NDUFS7O75251 213 aa9.27□□□□□ -0.92
SCG2-201ENST00000305409 OR8U8P0C7N1 319 aa9.27□□□□□ -0.92
SCG2-201ENST00000305409 KIR2DS2P43631 304 aa9.27□□□□□ -0.92
SCG2-201ENST00000305409 ICAM4Q14773 271 aa9.27□□□□□ -0.92
SCG2-201ENST00000305409 FFAR4Q5NUL3 377 aa9.27□□□□□ -0.92
SCG2-201ENST00000305409 ZNF787Q6DD87 383 aa9.27□□□□□ -0.92
SCG2-201ENST00000305409 C11orf42Q8N5U0 333 aa9.27□□□□□ -0.92
SCG2-201ENST00000305409 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.27□□□□□ -0.92
SCG2-201ENST00000305409 SLC35B3Q9H1N7 401 aa9.27□□□□□ -0.92
SCG2-201ENST00000305409 HIPK2Q9H2X6 1198 aa9.27□□□□□ -0.92
SCG2-201ENST00000305409 RPS10P5Q9NQ39 176 aa9.27□□□□□ -0.92
SCG2-201ENST00000305409 GAB2Q9UQC2 676 aa9.27□□□□□ -0.92
SCG2-201ENST00000305409 OR51B2Q9Y5P1 312 aa9.27□□□□□ -0.92
SCG2-201ENST00000305409 J3QR06 171 aa9.27□□□□□ -0.93
SCG2-201ENST00000305409 SAA1P0DJI8 122 aaPredicted RBP9.27□□□□□ -0.93
SCG2-201ENST00000305409 COX7A1P24310 79 aa9.27□□□□□ -0.93
SCG2-201ENST00000305409 DLX6P56179 175 aa9.27□□□□□ -0.93
SCG2-201ENST00000305409 RELQ04864 619 aaPredicted RBP9.27□□□□□ -0.93
SCG2-201ENST00000305409 AWAT1Q58HT5 328 aa9.27□□□□□ -0.93
SCG2-201ENST00000305409 MOB3BQ86TA1 216 aa9.27□□□□□ -0.93
SCG2-201ENST00000305409 COMMD1Q8N668 190 aa9.27□□□□□ -0.93
SCG2-201ENST00000305409 CYB561D1Q8N8Q1 229 aa9.27□□□□□ -0.93
SCG2-201ENST00000305409 OR10W1Q8NGF6 305 aa9.27□□□□□ -0.93
SCG2-201ENST00000305409 CLDND2Q8NHS1 167 aa9.27□□□□□ -0.93
SCG2-201ENST00000305409 PINX1Q96BK5 328 aaKnown RBP9.27□□□□□ -0.93
SCG2-201ENST00000305409 NPCDR1Q9BY65 106 aa9.27□□□□□ -0.93
SCG2-201ENST00000305409 IGSF10Q6WRI0 2623 aa9.27□□□□□ -0.93
SCG2-201ENST00000305409 RTL8BQ17RB0 113 aa9.26□□□□□ -0.93
SCG2-201ENST00000305409 TMEM155Q4W5P6 130 aa9.26□□□□□ -0.93
SCG2-201ENST00000305409 TMEM41BQ5BJD5 291 aa9.26□□□□□ -0.93
SCG2-201ENST00000305409 ZNF833PQ6ZTB9 187 aa9.26□□□□□ -0.93
SCG2-201ENST00000305409 GATAD1Q8WUU5 269 aa9.26□□□□□ -0.93
SCG2-201ENST00000305409 ISOC2Q96AB3 205 aa9.26□□□□□ -0.93
SCG2-201ENST00000305409 HARBI1Q96MB7 349 aa9.26□□□□□ -0.93
SCG2-201ENST00000305409 CLCC1Q96S66 551 aa9.26□□□□□ -0.93
SCG2-201ENST00000305409 NAV3Q8IVL0 2385 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms