RNA–Protein interactions for RNA: ENST00000260653.4

SIX3-201, Transcript of SIX homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX3, Length 2,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3-201ENST00000260653 OR1S2Q8NGQ3 325 aa18.15■□□□□ 0.5
SIX3-201ENST00000260653 RNF141Q8WVD5 230 aa18.15■□□□□ 0.5
SIX3-201ENST00000260653 TNFRSF14Q92956 283 aa18.15■□□□□ 0.5
SIX3-201ENST00000260653 SH3BGRL3Q9H299 93 aa18.15■□□□□ 0.5
SIX3-201ENST00000260653 FGF16O43320 207 aa18.15■□□□□ 0.5
SIX3-201ENST00000260653 IGHV2-5P01817 119 aa18.15■□□□□ 0.5
SIX3-201ENST00000260653 SIRT7Q9NRC8 400 aa18.15■□□□□ 0.5
SIX3-201ENST00000260653 A1L4Q6 167 aa18.14■□□□□ 0.49
SIX3-201ENST00000260653 ZFP36P26651 326 aaKnown RBP18.14■□□□□ 0.49
SIX3-201ENST00000260653 OR4C12Q96R67 309 aa18.14■□□□□ 0.49
SIX3-201ENST00000260653 TRAV20A0A0B4J274 112 aa18.14■□□□□ 0.49
SIX3-201ENST00000260653 C15orf61A6NNL5 157 aa18.14■□□□□ 0.49
SIX3-201ENST00000260653 IL3RAP26951 378 aa18.14■□□□□ 0.49
SIX3-201ENST00000260653 PRRX1P54821 245 aa18.14■□□□□ 0.49
SIX3-201ENST00000260653 PNKDQ8N490 385 aa18.14■□□□□ 0.49
SIX3-201ENST00000260653 ATP5SQ99766 215 aa18.14■□□□□ 0.49
SIX3-201ENST00000260653 VPS13CQ709C8 3753 aa18.14■□□□□ 0.49
SIX3-201ENST00000260653 KMT2BQ9UMN6 2715 aaPredicted RBP18.13■□□□□ 0.49
SIX3-201ENST00000260653 RAB19A4D1S5 217 aa18.13■□□□□ 0.49
SIX3-201ENST00000260653 TMEM14EPQ6UXP3 125 aa18.13■□□□□ 0.49
SIX3-201ENST00000260653 SPP1P10451 314 aa18.13■□□□□ 0.49
SIX3-201ENST00000260653 ZNF429Q86V71 674 aa18.13■□□□□ 0.49
SIX3-201ENST00000260653 BEND2Q8NDZ0 799 aa18.13■□□□□ 0.49
SIX3-201ENST00000260653 HARBI1Q96MB7 349 aa18.13■□□□□ 0.49
SIX3-201ENST00000260653 CIB3Q96Q77 187 aaPredicted RBP18.13■□□□□ 0.49
SIX3-201ENST00000260653 MED9Q9NWA0 146 aa18.13■□□□□ 0.49
SIX3-201ENST00000260653 BUB1B-PAK6H3BSN5 160 aa18.12■□□□□ 0.49
SIX3-201ENST00000260653 SPCS3P61009 180 aa18.12■□□□□ 0.49
SIX3-201ENST00000260653 OR4P4Q8NGL7 312 aa18.12■□□□□ 0.49
SIX3-201ENST00000260653 REG4Q9BYZ8 158 aa18.12■□□□□ 0.49
SIX3-201ENST00000260653 RFNGQ9Y644 331 aa18.12■□□□□ 0.49
SIX3-201ENST00000260653 CENPEQ02224 2701 aa18.12■□□□□ 0.49
SIX3-201ENST00000260653 ZNF705EA8MWA4 302 aaPredicted RBP18.12■□□□□ 0.49
SIX3-201ENST00000260653 SAA1P0DJI8 122 aaPredicted RBP18.12■□□□□ 0.49
SIX3-201ENST00000260653 OSR1Q8TAX0 266 aaPredicted RBP18.12■□□□□ 0.49
SIX3-201ENST00000260653 LHX4Q969G2 390 aa18.12■□□□□ 0.49
SIX3-201ENST00000260653 TMEM14BQ9NUH8 114 aa18.12■□□□□ 0.49
SIX3-201ENST00000260653 MYOD1P15172 320 aa18.11■□□□□ 0.49
SIX3-201ENST00000260653 OR8G2PQ6IF36 304 aa18.11■□□□□ 0.49
SIX3-201ENST00000260653 OR52E5Q8NH55 327 aa18.11■□□□□ 0.49
SIX3-201ENST00000260653 CLDND2Q8NHS1 167 aa18.11■□□□□ 0.49
SIX3-201ENST00000260653 LRRC20Q8TCA0 184 aa18.11■□□□□ 0.49
SIX3-201ENST00000260653 FLYWCH2Q96CP2 140 aaKnown RBP18.11■□□□□ 0.49
SIX3-201ENST00000260653 STRAPQ9Y3F4 350 aaKnown RBP18.11■□□□□ 0.49
SIX3-201ENST00000260653 IGHV3-72A0A0B4J1Y9 119 aa18.11■□□□□ 0.49
SIX3-201ENST00000260653 M0R1W7 72 aa18.11■□□□□ 0.49
SIX3-201ENST00000260653 SCO1O75880 301 aa18.11■□□□□ 0.49
SIX3-201ENST00000260653 IL6RP08887 468 aaPredicted RBP18.11■□□□□ 0.49
SIX3-201ENST00000260653 SEC11BP0C7V7 166 aa18.11■□□□□ 0.49
SIX3-201ENST00000260653 SULT1A2P50226 295 aa18.11■□□□□ 0.49
SIX3-201ENST00000260653 RPS16P62249 146 aaKnown RBP18.11■□□□□ 0.49
SIX3-201ENST00000260653 LCN2P80188 198 aa18.11■□□□□ 0.49
SIX3-201ENST00000260653 TMEM177Q53S58 311 aa18.11■□□□□ 0.49
SIX3-201ENST00000260653 PDPNQ86YL7 162 aa18.11■□□□□ 0.49
SIX3-201ENST00000260653 STPG2Q8N412 459 aa18.11■□□□□ 0.49
SIX3-201ENST00000260653 PCGF1Q9BSM1 259 aa18.11■□□□□ 0.49
SIX3-201ENST00000260653 TCF19Q9Y242 345 aa18.11■□□□□ 0.49
SIX3-201ENST00000260653 FOXA2Q9Y261 457 aaPredicted RBP18.11■□□□□ 0.49
SIX3-201ENST00000260653 WASHC3Q9Y3C0 194 aa18.11■□□□□ 0.49
SIX3-201ENST00000260653 CLN5O75503 358 aa18.1■□□□□ 0.49
SIX3-201ENST00000260653 ATP6V0CP27449 155 aa18.1■□□□□ 0.49
SIX3-201ENST00000260653 HBG1P69891 147 aa18.1■□□□□ 0.49
SIX3-201ENST00000260653 HBG2P69892 147 aa18.1■□□□□ 0.49
SIX3-201ENST00000260653 PDLIM3Q53GG5 364 aaPredicted RBP18.1■□□□□ 0.49
SIX3-201ENST00000260653 OR4C13Q8NGP0 309 aa18.1■□□□□ 0.49
SIX3-201ENST00000260653 MFSD2BA6NFX1 497 aa18.1■□□□□ 0.49
SIX3-201ENST00000260653 LMO4P61968 165 aa18.1■□□□□ 0.49
SIX3-201ENST00000260653 RUNX1Q01196 453 aa18.1■□□□□ 0.49
SIX3-201ENST00000260653 KLRD1Q13241 179 aa18.1■□□□□ 0.49
SIX3-201ENST00000260653 DFFBO76075 338 aa18.09■□□□□ 0.49
SIX3-201ENST00000260653 PDLIM4P50479 330 aa18.09■□□□□ 0.49
SIX3-201ENST00000260653 AANATQ16613 207 aa18.09■□□□□ 0.49
SIX3-201ENST00000260653 UPK2O00526 184 aa18.09■□□□□ 0.49
SIX3-201ENST00000260653 TSPAN4O14817 238 aa18.09■□□□□ 0.49
SIX3-201ENST00000260653 SLC38A11Q08AI6 406 aa18.09■□□□□ 0.49
SIX3-201ENST00000260653 NRGNQ92686 78 aa18.09■□□□□ 0.49
SIX3-201ENST00000260653 BET1LQ9NYM9 111 aa18.09■□□□□ 0.49
SIX3-201ENST00000260653 ARG1P05089 322 aa18.08■□□□□ 0.49
SIX3-201ENST00000260653 COX6B1P14854 86 aa18.08■□□□□ 0.49
SIX3-201ENST00000260653 VDAC2P45880 294 aaPredicted RBP18.08■□□□□ 0.49
SIX3-201ENST00000260653 RAB13P51153 203 aa18.08■□□□□ 0.49
SIX3-201ENST00000260653 LDLRAD2Q5SZI1 272 aa18.08■□□□□ 0.49
SIX3-201ENST00000260653 PUSL1Q8N0Z8 303 aaKnown RBP18.08■□□□□ 0.49
SIX3-201ENST00000260653 TSNAXQ99598 290 aaKnown RBP18.08■□□□□ 0.49
SIX3-201ENST00000260653 USP9YO00507 2555 aaPredicted RBP18.08■□□□□ 0.49
SIX3-201ENST00000260653 PMS2P5A8MQ11 134 aa18.08■□□□□ 0.48
SIX3-201ENST00000260653 PRTN3P24158 256 aa18.08■□□□□ 0.48
SIX3-201ENST00000260653 SP5Q6BEB4 398 aaPredicted RBP18.08■□□□□ 0.48
SIX3-201ENST00000260653 MARVELD3Q96A59 401 aa18.08■□□□□ 0.48
SIX3-201ENST00000260653 HEYLQ9NQ87 328 aaPredicted RBP18.08■□□□□ 0.48
SIX3-201ENST00000260653 AMMECR1Q9Y4X0 333 aaPredicted RBP18.08■□□□□ 0.48
SIX3-201ENST00000260653 C15orf62A8K5M9 175 aa18.07■□□□□ 0.48
SIX3-201ENST00000260653 ENSAO43768 121 aaKnown RBP18.07■□□□□ 0.48
SIX3-201ENST00000260653 HOXA1P49639 335 aaPredicted RBP18.07■□□□□ 0.48
SIX3-201ENST00000260653 HSPE1P61604 102 aaKnown RBP18.07■□□□□ 0.48
SIX3-201ENST00000260653 HCP5Q6MZN7 132 aa18.07■□□□□ 0.48
SIX3-201ENST00000260653 RITA1Q96K30 269 aa18.07■□□□□ 0.48
SIX3-201ENST00000260653 MS4A7Q9GZW8 240 aaPredicted RBP18.07■□□□□ 0.48
SIX3-201ENST00000260653 PRNDQ9UKY0 176 aa18.07■□□□□ 0.48
SIX3-201ENST00000260653 OR51B2Q9Y5P1 312 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms