RNA–Protein interactions for RNA: ENST00000259605.10

RNF38-201, Transcript of ring finger protein 38, humanhuman

TSL 1 (best) BASIC

Gene RNF38, Length 5,012 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-201ENST00000259605 MBD3L2Q8NHZ7 208 aaPredicted RBP3.41□□□□□ -1.86
RNF38-201ENST00000259605 MRPL32Q9BYC8 188 aaKnown RBP3.41□□□□□ -1.86
RNF38-201ENST00000259605 MAP1LC3AQ9H492 121 aa3.41□□□□□ -1.86
RNF38-201ENST00000259605 CST9LQ9H4G1 147 aa3.41□□□□□ -1.86
RNF38-201ENST00000259605 NAT8BQ9UHF3 227 aa3.41□□□□□ -1.86
RNF38-201ENST00000259605 HSPB8Q9UJY1 196 aa3.41□□□□□ -1.86
RNF38-201ENST00000259605 KCNE3Q9Y6H6 103 aa3.41□□□□□ -1.86
RNF38-201ENST00000259605 DDX60Q8IY21 1712 aaKnown RBP3.41□□□□□ -1.86
RNF38-201ENST00000259605 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.41□□□□□ -1.86
RNF38-201ENST00000259605 TRAV21A0A0B4J279 112 aa3.41□□□□□ -1.86
RNF38-201ENST00000259605 PRR32B1ATL7 298 aa3.41□□□□□ -1.86
RNF38-201ENST00000259605 PLAUP00749 431 aa3.41□□□□□ -1.86
RNF38-201ENST00000259605 PPYP01298 95 aa3.41□□□□□ -1.86
RNF38-201ENST00000259605 OPRL1P41146 370 aa3.41□□□□□ -1.86
RNF38-201ENST00000259605 EFNB1P98172 346 aa3.41□□□□□ -1.86
RNF38-201ENST00000259605 C2orf83Q53S99 150 aa3.41□□□□□ -1.86
RNF38-201ENST00000259605 S100A7L2Q5SY68 101 aa3.41□□□□□ -1.86
RNF38-201ENST00000259605 RNF165Q6ZSG1 346 aa3.41□□□□□ -1.86
RNF38-201ENST00000259605 VMO1Q7Z5L0 202 aa3.41□□□□□ -1.86
RNF38-201ENST00000259605 RCHY1Q96PM5 261 aa3.41□□□□□ -1.86
RNF38-201ENST00000259605 LPAR5Q9H1C0 372 aa3.41□□□□□ -1.86
RNF38-201ENST00000259605 JPT2Q9H910 190 aa3.41□□□□□ -1.86
RNF38-201ENST00000259605 C20orf141Q9NUB4 165 aa3.41□□□□□ -1.86
RNF38-201ENST00000259605 GPR132Q9UNW8 380 aa3.41□□□□□ -1.86
RNF38-201ENST00000259605 COL18A1P39060 1754 aa3.41□□□□□ -1.86
RNF38-201ENST00000259605 TRBV7-1A0A0A6YYK4 115 aa3.41□□□□□ -1.86
RNF38-201ENST00000259605 KBTBD11-OT1A0A1B0GTJ5 212 aa3.41□□□□□ -1.86
RNF38-201ENST00000259605 ZNF701M0R085 212 aaPredicted RBP3.41□□□□□ -1.86
RNF38-201ENST00000259605 CRLF1O75462 422 aa3.41□□□□□ -1.86
RNF38-201ENST00000259605 CST7O76096 145 aa3.41□□□□□ -1.86
RNF38-201ENST00000259605 CDS2O95674 445 aa3.41□□□□□ -1.86
RNF38-201ENST00000259605 KRTDAPP60985 99 aa3.41□□□□□ -1.86
RNF38-201ENST00000259605 UBE2BP63146 152 aa3.41□□□□□ -1.86
RNF38-201ENST00000259605 DLK1P80370 383 aa3.41□□□□□ -1.86
RNF38-201ENST00000259605 C5orf64Q2M2E5 130 aa3.41□□□□□ -1.86
RNF38-201ENST00000259605 DMRTA1Q5VZB9 504 aa3.41□□□□□ -1.86
RNF38-201ENST00000259605 SPATA31B1PQ5VZV4 182 aa3.41□□□□□ -1.86
RNF38-201ENST00000259605 ZNF705AQ6ZN79 300 aaPredicted RBP3.41□□□□□ -1.86
RNF38-201ENST00000259605 ZNF826PQ6ZT77 177 aa3.41□□□□□ -1.86
RNF38-201ENST00000259605 SPRED2Q7Z698 418 aa3.41□□□□□ -1.86
RNF38-201ENST00000259605 SIAH3Q8IW03 269 aa3.41□□□□□ -1.86
RNF38-201ENST00000259605 DRAM1Q8N682 238 aa3.41□□□□□ -1.86
RNF38-201ENST00000259605 NAT8Q9UHE5 227 aa3.41□□□□□ -1.86
RNF38-201ENST00000259605 ING1Q9UK53 422 aaPredicted RBP3.41□□□□□ -1.86
RNF38-201ENST00000259605 CSAG2Q9Y5P2 127 aa3.41□□□□□ -1.86
RNF38-201ENST00000259605 MYH11P35749 1972 aa3.41□□□□□ -1.86
RNF38-201ENST00000259605 ARFGEF2Q9Y6D5 1785 aa3.41□□□□□ -1.86
RNF38-201ENST00000259605 AKAP6Q13023 2319 aa3.41□□□□□ -1.86
RNF38-201ENST00000259605 A0A0G2JNJ9 132 aa3.41□□□□□ -1.86
RNF38-201ENST00000259605 SOD3P08294 240 aa3.41□□□□□ -1.86
RNF38-201ENST00000259605 RNF224P0DH78 156 aa3.41□□□□□ -1.86
RNF38-201ENST00000259605 PGA4P0DJD7 388 aa3.41□□□□□ -1.86
RNF38-201ENST00000259605 PGA5P0DJD9 388 aa3.41□□□□□ -1.86
RNF38-201ENST00000259605 IGHV1-2P23083 117 aa3.41□□□□□ -1.86
RNF38-201ENST00000259605 CRYBB2P43320 205 aa3.41□□□□□ -1.86
RNF38-201ENST00000259605 FUT5Q11128 374 aa3.41□□□□□ -1.86
RNF38-201ENST00000259605 ZNF154Q13106 437 aa3.41□□□□□ -1.86
RNF38-201ENST00000259605 UQCC3Q6UW78 93 aa3.41□□□□□ -1.86
RNF38-201ENST00000259605 MAVSQ7Z434 540 aa3.41□□□□□ -1.86
RNF38-201ENST00000259605 TEX45Q8NA69 505 aa3.41□□□□□ -1.86
RNF38-201ENST00000259605 OR5H6Q8NGV6 325 aa3.41□□□□□ -1.86
RNF38-201ENST00000259605 NPDC1Q9NQX5 325 aaPredicted RBP3.41□□□□□ -1.86
RNF38-201ENST00000259605 PEF1Q9UBV8 284 aaKnown RBP3.41□□□□□ -1.86
RNF38-201ENST00000259605 Q9UFV3 132 aa3.41□□□□□ -1.86
RNF38-201ENST00000259605 SPTBN1Q01082 2364 aaKnown RBP3.4□□□□□ -1.86
RNF38-201ENST00000259605 SHANK3Q9BYB0 1731 aa3.4□□□□□ -1.86
RNF38-201ENST00000259605 TMSB15BA0A087X1C1 80 aa3.4□□□□□ -1.86
RNF38-201ENST00000259605 IGHV1-69DA0A0B4J2H0 117 aa3.4□□□□□ -1.86
RNF38-201ENST00000259605 TRBV7-9A0A0J9YWB2 115 aa3.4□□□□□ -1.86
RNF38-201ENST00000259605 FAM90A26D6RGX4 464 aa3.4□□□□□ -1.86
RNF38-201ENST00000259605 CTDSP2O14595 271 aa3.4□□□□□ -1.86
RNF38-201ENST00000259605 PDE6DO43924 150 aa3.4□□□□□ -1.86
RNF38-201ENST00000259605 IGHV1-69P01742 117 aa3.4□□□□□ -1.86
RNF38-201ENST00000259605 PTHLHP12272 177 aa3.4□□□□□ -1.86
RNF38-201ENST00000259605 LIMS2Q7Z4I7 341 aa3.4□□□□□ -1.86
RNF38-201ENST00000259605 NKAPP1Q8N9T2 125 aa3.4□□□□□ -1.86
RNF38-201ENST00000259605 OR8A1Q8NGG7 326 aa3.4□□□□□ -1.86
RNF38-201ENST00000259605 ST6GAL2Q96JF0 529 aa3.4□□□□□ -1.86
RNF38-201ENST00000259605 ANKRD60Q9BZ19 345 aa3.4□□□□□ -1.86
RNF38-201ENST00000259605 TMEM126AQ9H061 195 aa3.4□□□□□ -1.86
RNF38-201ENST00000259605 ALX4Q9H161 411 aaPredicted RBP3.4□□□□□ -1.86
RNF38-201ENST00000259605 DNAJC4Q9NNZ3 241 aa3.4□□□□□ -1.86
RNF38-201ENST00000259605 FGF20Q9NP95 211 aaPredicted RBP3.4□□□□□ -1.86
RNF38-201ENST00000259605 NUP205Q92621 2012 aa3.4□□□□□ -1.86
RNF38-201ENST00000259605 SHISA3A0PJX4 238 aa3.4□□□□□ -1.87
RNF38-201ENST00000259605 CLPSL1A2RUU4 121 aa3.4□□□□□ -1.87
RNF38-201ENST00000259605 NPIPB13A6NJU9 1138 aa3.4□□□□□ -1.87
RNF38-201ENST00000259605 GGTLC3B5MD39 225 aa3.4□□□□□ -1.87
RNF38-201ENST00000259605 TSPAN13O95857 204 aa3.4□□□□□ -1.87
RNF38-201ENST00000259605 GIPP09681 153 aaPredicted RBP3.4□□□□□ -1.87
RNF38-201ENST00000259605 CKS2P33552 79 aa3.4□□□□□ -1.87
RNF38-201ENST00000259605 SUMO1P63165 101 aaKnown RBP3.4□□□□□ -1.87
RNF38-201ENST00000259605 DEFA6Q01524 100 aa3.4□□□□□ -1.87
RNF38-201ENST00000259605 IRF3Q14653 427 aa3.4□□□□□ -1.87
RNF38-201ENST00000259605 PSMG4Q5JS54 123 aa3.4□□□□□ -1.87
RNF38-201ENST00000259605 CGB2Q6NT52 195 aa3.4□□□□□ -1.87
RNF38-201ENST00000259605 OR2C3Q8N628 320 aa3.4□□□□□ -1.87
RNF38-201ENST00000259605 ZNF525Q8N782 197 aa3.4□□□□□ -1.87
RNF38-201ENST00000259605 OR11H1Q8NG94 326 aa3.4□□□□□ -1.87
RNF38-201ENST00000259605 OR11H2Q8NH07 326 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms