RNA–Protein interactions for RNA: ENST00000228827.7

GPN3-201, Transcript of GPN-loop GTPase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPN3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-201ENST00000228827 RPL27AP46776 148 aaKnown RBP10.89□□□□□ -0.67
GPN3-201ENST00000228827 RFX2P48378 723 aa10.89□□□□□ -0.67
GPN3-201ENST00000228827 HERV-K104P61576 105 aa10.89□□□□□ -0.67
GPN3-201ENST00000228827 EXOSC2Q13868 293 aaKnown RBP10.89□□□□□ -0.67
GPN3-201ENST00000228827 KLF5Q13887 457 aaPredicted RBP10.89□□□□□ -0.67
GPN3-201ENST00000228827 MSMO1Q15800 293 aa10.89□□□□□ -0.67
GPN3-201ENST00000228827 TTC9CQ8N5M4 171 aa10.89□□□□□ -0.67
GPN3-201ENST00000228827 OR51H1Q8NH63 302 aa10.89□□□□□ -0.67
GPN3-201ENST00000228827 TMEM167AQ8TBQ9 72 aa10.89□□□□□ -0.67
GPN3-201ENST00000228827 DPPA5A6NC42 116 aa10.88□□□□□ -0.67
GPN3-201ENST00000228827 E7EUB6 86 aa10.88□□□□□ -0.67
GPN3-201ENST00000228827 OR2J3O76001 311 aa10.88□□□□□ -0.67
GPN3-201ENST00000228827 HRASP01112 189 aa10.88□□□□□ -0.67
GPN3-201ENST00000228827 IL6RP08887 468 aaPredicted RBP10.88□□□□□ -0.67
GPN3-201ENST00000228827 PRSS3P35030 304 aa10.88□□□□□ -0.67
GPN3-201ENST00000228827 ATP5G2Q06055 141 aa10.88□□□□□ -0.67
GPN3-201ENST00000228827 CATR1Q13166 79 aa10.88□□□□□ -0.67
GPN3-201ENST00000228827 RPEL1Q2QD12 228 aa10.88□□□□□ -0.67
GPN3-201ENST00000228827 ANKRD13BQ86YJ7 626 aa10.88□□□□□ -0.67
GPN3-201ENST00000228827 ZBTB34Q8NCN2 500 aa10.88□□□□□ -0.67
GPN3-201ENST00000228827 OR9G4Q8NGQ1 327 aa10.88□□□□□ -0.67
GPN3-201ENST00000228827 ZNF2Q9BSG1 426 aaPredicted RBP10.88□□□□□ -0.67
GPN3-201ENST00000228827 HRASLSQ9HDD0 168 aa10.88□□□□□ -0.67
GPN3-201ENST00000228827 COL7A1Q02388 2944 aa10.88□□□□□ -0.67
GPN3-201ENST00000228827 A0A1B0GW64 132 aa10.87□□□□□ -0.67
GPN3-201ENST00000228827 FAM223BA6NKX1 122 aa10.87□□□□□ -0.67
GPN3-201ENST00000228827 NHLRC4P0CG21 123 aaPredicted RBP10.87□□□□□ -0.67
GPN3-201ENST00000228827 AADACL3Q5VUY0 350 aa10.87□□□□□ -0.67
GPN3-201ENST00000228827 SLC25A42Q86VD7 318 aa10.87□□□□□ -0.67
GPN3-201ENST00000228827 FAM223AQ8IWN6 122 aa10.87□□□□□ -0.67
GPN3-201ENST00000228827 OR5H2Q8NGV7 314 aa10.87□□□□□ -0.67
GPN3-201ENST00000228827 KCTD12Q96CX2 325 aaKnown RBP10.87□□□□□ -0.67
GPN3-201ENST00000228827 ANAPC10Q9UM13 185 aa10.87□□□□□ -0.67
GPN3-201ENST00000228827 TRBV9A0A0B4J1U6 114 aa10.87□□□□□ -0.67
GPN3-201ENST00000228827 IGLV1-51P01701 117 aa10.87□□□□□ -0.67
GPN3-201ENST00000228827 ZNF735P0CB33 412 aa10.87□□□□□ -0.67
GPN3-201ENST00000228827 AREGP15514 252 aa10.87□□□□□ -0.67
GPN3-201ENST00000228827 RPA2P15927 270 aa10.87□□□□□ -0.67
GPN3-201ENST00000228827 HLA-GP17693 338 aa10.87□□□□□ -0.67
GPN3-201ENST00000228827 HLA-DMAP28067 261 aa10.87□□□□□ -0.67
GPN3-201ENST00000228827 MAS1LP35410 378 aa10.87□□□□□ -0.67
GPN3-201ENST00000228827 RPL8P62917 257 aaKnown RBP10.87□□□□□ -0.67
GPN3-201ENST00000228827 OR4A47Q6IF82 309 aa10.87□□□□□ -0.67
GPN3-201ENST00000228827 SNX29P2Q8IUI4 249 aa10.87□□□□□ -0.67
GPN3-201ENST00000228827 NECAP1Q8NC96 275 aa10.87□□□□□ -0.67
GPN3-201ENST00000228827 NAA50Q9GZZ1 169 aaKnown RBP10.87□□□□□ -0.67
GPN3-201ENST00000228827 TRAV3A0A0B4J244 114 aa10.86□□□□□ -0.67
GPN3-201ENST00000228827 SMIM31A0A1B0GVY4 71 aa10.86□□□□□ -0.67
GPN3-201ENST00000228827 BMPR1BO00238 502 aa10.86□□□□□ -0.67
GPN3-201ENST00000228827 RBFOX2O43251 390 aaKnown RBP eCLIP10.86□□□□□ -0.67
GPN3-201ENST00000228827 HPGDSO60760 199 aa10.86□□□□□ -0.67
GPN3-201ENST00000228827 S1PR2O95136 353 aa10.86□□□□□ -0.67
GPN3-201ENST00000228827 HPRT1P00492 218 aa10.86□□□□□ -0.67
GPN3-201ENST00000228827 IGHV3-23P01764 117 aa10.86□□□□□ -0.67
GPN3-201ENST00000228827 RLN1P04808 185 aa10.86□□□□□ -0.67
GPN3-201ENST00000228827 REG1AP05451 166 aa10.86□□□□□ -0.67
GPN3-201ENST00000228827 SMIM18P0DKX4 95 aa10.86□□□□□ -0.67
GPN3-201ENST00000228827 GNRHRP30968 328 aa10.86□□□□□ -0.67
GPN3-201ENST00000228827 TAS2R31P59538 309 aa10.86□□□□□ -0.67
GPN3-201ENST00000228827 TAS2R46P59540 309 aa10.86□□□□□ -0.67
GPN3-201ENST00000228827 TATDN3Q17R31 274 aa10.86□□□□□ -0.67
GPN3-201ENST00000228827 C15orf32Q32M92 178 aa10.86□□□□□ -0.67
GPN3-201ENST00000228827 DHRS11Q6UWP2 260 aa10.86□□□□□ -0.67
GPN3-201ENST00000228827 IL34Q6ZMJ4 242 aa10.86□□□□□ -0.67
GPN3-201ENST00000228827 MOB3AQ96BX8 217 aa10.86□□□□□ -0.67
GPN3-201ENST00000228827 WWC2-AS2Q96NR7 200 aa10.86□□□□□ -0.67
GPN3-201ENST00000228827 SLC2A9Q9NRM0 540 aa10.86□□□□□ -0.67
GPN3-201ENST00000228827 FBXL7Q9UJT9 491 aa10.86□□□□□ -0.67
GPN3-201ENST00000228827 ZNF257Q9Y2Q1 563 aa10.86□□□□□ -0.67
GPN3-201ENST00000228827 S4R3C0 116 aa10.86□□□□□ -0.67
GPN3-201ENST00000228827 U3KQK5 164 aa10.86□□□□□ -0.67
GPN3-201ENST00000228827 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.85□□□□□ -0.67
GPN3-201ENST00000228827 NPIPB5A8MRT5 1133 aa10.85□□□□□ -0.67
GPN3-201ENST00000228827 NAT1P18440 290 aa10.85□□□□□ -0.67
GPN3-201ENST00000228827 ELK1P19419 428 aa10.85□□□□□ -0.67
GPN3-201ENST00000228827 HRH1P35367 487 aa10.85□□□□□ -0.67
GPN3-201ENST00000228827 LYSMD2Q8IV50 215 aa10.85□□□□□ -0.67
GPN3-201ENST00000228827 DMBX1Q8NFW5 382 aa10.85□□□□□ -0.67
GPN3-201ENST00000228827 OR4A5Q8NH83 315 aa10.85□□□□□ -0.67
GPN3-201ENST00000228827 AIFM2Q9BRQ8 373 aa10.85□□□□□ -0.67
GPN3-201ENST00000228827 FXYD6Q9H0Q3 95 aa10.85□□□□□ -0.67
GPN3-201ENST00000228827 TMEM140Q9NV12 185 aa10.85□□□□□ -0.67
GPN3-201ENST00000228827 BET1LQ9NYM9 111 aa10.85□□□□□ -0.67
GPN3-201ENST00000228827 FAM25AB3EWG3 89 aa10.84□□□□□ -0.67
GPN3-201ENST00000228827 FAM25CB3EWG5 89 aa10.84□□□□□ -0.67
GPN3-201ENST00000228827 FAM25GB3EWG6 89 aa10.84□□□□□ -0.67
GPN3-201ENST00000228827 PPP5D1E7EU14 171 aa10.84□□□□□ -0.67
GPN3-201ENST00000228827 UPK2O00526 184 aa10.84□□□□□ -0.67
GPN3-201ENST00000228827 PGLYRP1O75594 196 aaPredicted RBP10.84□□□□□ -0.67
GPN3-201ENST00000228827 NDUFB8O95169 186 aa10.84□□□□□ -0.67
GPN3-201ENST00000228827 HLA-AP01891 365 aaKnown RBP10.84□□□□□ -0.67
GPN3-201ENST00000228827 APOA1P02647 267 aa10.84□□□□□ -0.67
GPN3-201ENST00000228827 CSN3P07498 182 aa10.84□□□□□ -0.67
GPN3-201ENST00000228827 FRMD6-AS1P0C7T7 363 aa10.84□□□□□ -0.67
GPN3-201ENST00000228827 NQO2P16083 231 aa10.84□□□□□ -0.67
GPN3-201ENST00000228827 PSMB6P28072 239 aa10.84□□□□□ -0.67
GPN3-201ENST00000228827 RORCP51449 518 aa10.84□□□□□ -0.67
GPN3-201ENST00000228827 RNASE12Q5GAN4 147 aaKnown RBP10.84□□□□□ -0.67
GPN3-201ENST00000228827 SBSPONQ8IVN8 264 aa10.84□□□□□ -0.67
GPN3-201ENST00000228827 OR6F1Q8NGZ6 308 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms