RNA–Protein interactions for RNA: ENST00000221973.7

LIM2-201, Transcript of lens intrinsic membrane protein 2, humanhuman

TSL 1 (best) BASIC

Gene LIM2, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2-201ENST00000221973 OR52B4Q8NGK2 314 aa13.02□□□□□ -0.33
LIM2-201ENST00000221973 CLCC1Q96S66 551 aa13.02□□□□□ -0.33
LIM2-201ENST00000221973 RASL11BQ9BPW5 248 aa13.02□□□□□ -0.33
LIM2-201ENST00000221973 MARVELD1Q9BSK0 173 aa13.02□□□□□ -0.33
LIM2-201ENST00000221973 TPSG1Q9NRR2 321 aa13.02□□□□□ -0.33
LIM2-201ENST00000221973 MARCH11A6NNE9 402 aa13.01□□□□□ -0.33
LIM2-201ENST00000221973 M0QZK8 103 aa13.01□□□□□ -0.33
LIM2-201ENST00000221973 FGF16O43320 207 aa13.01□□□□□ -0.33
LIM2-201ENST00000221973 CDS2O95674 445 aa13.01□□□□□ -0.33
LIM2-201ENST00000221973 CRYBA1P05813 215 aa13.01□□□□□ -0.33
LIM2-201ENST00000221973 BLCAPP62952 87 aa13.01□□□□□ -0.33
LIM2-201ENST00000221973 ANKRD55Q3KP44 614 aa13.01□□□□□ -0.33
LIM2-201ENST00000221973 SELENOHQ8IZQ5 122 aaKnown RBP13.01□□□□□ -0.33
LIM2-201ENST00000221973 FAM71E2Q8N5Q1 922 aa13.01□□□□□ -0.33
LIM2-201ENST00000221973 LHFPL5Q8TAF8 219 aa13.01□□□□□ -0.33
LIM2-201ENST00000221973 WFDC12Q8WWY7 111 aa13.01□□□□□ -0.33
LIM2-201ENST00000221973 SEC22CQ9BRL7 303 aa13.01□□□□□ -0.33
LIM2-201ENST00000221973 AIFM2Q9BRQ8 373 aa13.01□□□□□ -0.33
LIM2-201ENST00000221973 SIGLEC9Q9Y336 463 aa13.01□□□□□ -0.33
LIM2-201ENST00000221973 OR2A4O95047 310 aa13□□□□□ -0.33
LIM2-201ENST00000221973 CRYGBP07316 175 aa13□□□□□ -0.33
LIM2-201ENST00000221973 AKR1C2P52895 323 aa13□□□□□ -0.33
LIM2-201ENST00000221973 KRTAP10-3P60369 221 aa13□□□□□ -0.33
LIM2-201ENST00000221973 POU2AF1Q16633 256 aa13□□□□□ -0.33
LIM2-201ENST00000221973 C9orf152Q5JTZ5 239 aa13□□□□□ -0.33
LIM2-201ENST00000221973 OR4A47Q6IF82 309 aa13□□□□□ -0.33
LIM2-201ENST00000221973 LIN54Q6MZP7 749 aa13□□□□□ -0.33
LIM2-201ENST00000221973 LGI3Q8N145 548 aa13□□□□□ -0.33
LIM2-201ENST00000221973 TEX45Q8NA69 505 aa13□□□□□ -0.33
LIM2-201ENST00000221973 RNASE11Q8TAA1 199 aaKnown RBP13□□□□□ -0.33
LIM2-201ENST00000221973 RBPMSQ93062 196 aaKnown RBP13□□□□□ -0.33
LIM2-201ENST00000221973 SEC22AQ96IW7 307 aa13□□□□□ -0.33
LIM2-201ENST00000221973 TMEM56Q96MV1 263 aa13□□□□□ -0.33
LIM2-201ENST00000221973 OR2A7Q96R45 310 aa13□□□□□ -0.33
LIM2-201ENST00000221973 NPFFR1Q9GZQ6 430 aa13□□□□□ -0.33
LIM2-201ENST00000221973 TMEM140Q9NV12 185 aa13□□□□□ -0.33
LIM2-201ENST00000221973 TMEM56-RWDD3S4R434 201 aa13□□□□□ -0.33
LIM2-201ENST00000221973 FCN1O00602 326 aa12.99□□□□□ -0.33
LIM2-201ENST00000221973 NDUFA7O95182 113 aa12.99□□□□□ -0.33
LIM2-201ENST00000221973 DHFRP00374 187 aa12.99□□□□□ -0.33
LIM2-201ENST00000221973 IGKV1-5P01602 117 aa12.99□□□□□ -0.33
LIM2-201ENST00000221973 IL5P05113 134 aa12.99□□□□□ -0.33
LIM2-201ENST00000221973 RAG2P55895 527 aa12.99□□□□□ -0.33
LIM2-201ENST00000221973 SRPXP78539 464 aa12.99□□□□□ -0.33
LIM2-201ENST00000221973 PJVKQ0ZLH3 352 aa12.99□□□□□ -0.33
LIM2-201ENST00000221973 Q6ZS46 218 aa12.99□□□□□ -0.33
LIM2-201ENST00000221973 H2BFWTQ7Z2G1 175 aa12.99□□□□□ -0.33
LIM2-201ENST00000221973 PPP1R27Q86WC6 154 aa12.99□□□□□ -0.33
LIM2-201ENST00000221973 PUSL1Q8N0Z8 303 aaKnown RBP12.99□□□□□ -0.33
LIM2-201ENST00000221973 SLC35G3Q8N808 338 aa12.99□□□□□ -0.33
LIM2-201ENST00000221973 VSTM2AQ8TAG5 236 aa12.99□□□□□ -0.33
LIM2-201ENST00000221973 TRAV3A0A0B4J244 114 aa12.98□□□□□ -0.33
LIM2-201ENST00000221973 ATG12O94817 140 aa12.98□□□□□ -0.33
LIM2-201ENST00000221973 KBTBD11O94819 623 aa12.98□□□□□ -0.33
LIM2-201ENST00000221973 DUS4LO95620 317 aaKnown RBP12.98□□□□□ -0.33
LIM2-201ENST00000221973 OXA1LQ15070 435 aa12.98□□□□□ -0.33
LIM2-201ENST00000221973 IZUMO4Q1ZYL8 232 aa12.98□□□□□ -0.33
LIM2-201ENST00000221973 LYZL2Q7Z4W2 148 aa12.98□□□□□ -0.33
LIM2-201ENST00000221973 COQ8AQ8NI60 647 aa12.98□□□□□ -0.33
LIM2-201ENST00000221973 TMEM167AQ8TBQ9 72 aa12.98□□□□□ -0.33
LIM2-201ENST00000221973 ZNF431Q8TF32 576 aaPredicted RBP12.98□□□□□ -0.33
LIM2-201ENST00000221973 IL22RA2Q969J5 263 aa12.98□□□□□ -0.33
LIM2-201ENST00000221973 RRNAD1Q96FB5 475 aaKnown RBP12.98□□□□□ -0.33
LIM2-201ENST00000221973 CITED1Q99966 193 aa12.98□□□□□ -0.33
LIM2-201ENST00000221973 PRSS22Q9GZN4 317 aa12.98□□□□□ -0.33
LIM2-201ENST00000221973 RANBP3Q9H6Z4 567 aaPredicted RBP12.98□□□□□ -0.33
LIM2-201ENST00000221973 ZNF430Q9H8G1 570 aaPredicted RBP12.98□□□□□ -0.33
LIM2-201ENST00000221973 BET1LQ9NYM9 111 aa12.98□□□□□ -0.33
LIM2-201ENST00000221973 A0A0G2JRQ6 117 aa12.97□□□□□ -0.33
LIM2-201ENST00000221973 UPK2O00526 184 aa12.97□□□□□ -0.33
LIM2-201ENST00000221973 PRAF2O60831 178 aa12.97□□□□□ -0.33
LIM2-201ENST00000221973 CA2P00918 260 aa12.97□□□□□ -0.33
LIM2-201ENST00000221973 HLA-DRB1P01911 266 aa12.97□□□□□ -0.33
LIM2-201ENST00000221973 RPL15P61313 204 aaKnown RBP12.97□□□□□ -0.33
LIM2-201ENST00000221973 GNB1P62873 340 aa12.97□□□□□ -0.33
LIM2-201ENST00000221973 DEFA6Q01524 100 aa12.97□□□□□ -0.33
LIM2-201ENST00000221973 PRSS8Q16651 343 aa12.97□□□□□ -0.33
LIM2-201ENST00000221973 MRGPRG-AS1Q2M3A8 158 aa12.97□□□□□ -0.33
LIM2-201ENST00000221973 PDLIM3Q53GG5 364 aaPredicted RBP12.97□□□□□ -0.33
LIM2-201ENST00000221973 Q6ZSV7 163 aa12.97□□□□□ -0.33
LIM2-201ENST00000221973 UXS1Q8NBZ7 420 aa12.97□□□□□ -0.33
LIM2-201ENST00000221973 MITD1Q8WV92 249 aa12.97□□□□□ -0.33
LIM2-201ENST00000221973 PHB2Q99623 299 aa12.97□□□□□ -0.33
LIM2-201ENST00000221973 HSPB9Q9BQS6 159 aa12.97□□□□□ -0.33
LIM2-201ENST00000221973 ZNF702PQ9H963 129 aa12.97□□□□□ -0.33
LIM2-201ENST00000221973 GPN1Q9HCN4 374 aaPredicted RBP12.97□□□□□ -0.33
LIM2-201ENST00000221973 NSG2Q9Y328 171 aa12.97□□□□□ -0.33
LIM2-201ENST00000221973 A0A0B4J2A0 478 aa12.96□□□□□ -0.33
LIM2-201ENST00000221973 A0A1B0GUS0 222 aa12.96□□□□□ -0.33
LIM2-201ENST00000221973 IL6RP08887 468 aaPredicted RBP12.96□□□□□ -0.33
LIM2-201ENST00000221973 HOXB5P09067 269 aa12.96□□□□□ -0.33
LIM2-201ENST00000221973 OR9G9P0C7N8 305 aa12.96□□□□□ -0.33
LIM2-201ENST00000221973 TNXAQ16473 311 aa12.96□□□□□ -0.33
LIM2-201ENST00000221973 ARSJQ5FYB0 599 aaPredicted RBP12.96□□□□□ -0.33
LIM2-201ENST00000221973 MMD2Q8IY49 270 aa12.96□□□□□ -0.33
LIM2-201ENST00000221973 LRTM2Q8N967 370 aa12.96□□□□□ -0.33
LIM2-201ENST00000221973 OR4F5Q8NH21 305 aa12.96□□□□□ -0.33
LIM2-201ENST00000221973 OR4A5Q8NH83 315 aa12.96□□□□□ -0.33
LIM2-201ENST00000221973 CHPT1Q8WUD6 406 aa12.96□□□□□ -0.33
LIM2-201ENST00000221973 SHPKQ9UHJ6 478 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms