RNA–Protein interactions for RNA: ENST00000218388.8

TIMP1-201, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP1, Length 892 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-201ENST00000218388 A0A0B4J2A0 478 aa10.46□□□□□ -0.73
TIMP1-201ENST00000218388 SNAPC5O75971 98 aa10.46□□□□□ -0.73
TIMP1-201ENST00000218388 IGKV1-39P01597 117 aa10.46□□□□□ -0.73
TIMP1-201ENST00000218388 IGKV1D-39P04432 117 aa10.46□□□□□ -0.73
TIMP1-201ENST00000218388 AMY1AP04745 511 aa10.46□□□□□ -0.73
TIMP1-201ENST00000218388 CRYGBP07316 175 aa10.46□□□□□ -0.73
TIMP1-201ENST00000218388 FGF2P09038 288 aa10.46□□□□□ -0.73
TIMP1-201ENST00000218388 SELENOHQ8IZQ5 122 aaKnown RBP10.46□□□□□ -0.73
TIMP1-201ENST00000218388 LRTM2Q8N967 370 aa10.46□□□□□ -0.73
TIMP1-201ENST00000218388 OR2T6Q8NHC8 308 aa10.46□□□□□ -0.73
TIMP1-201ENST00000218388 TMEM167AQ8TBQ9 72 aa10.46□□□□□ -0.73
TIMP1-201ENST00000218388 ZNF431Q8TF32 576 aaPredicted RBP10.46□□□□□ -0.73
TIMP1-201ENST00000218388 SEC22AQ96IW7 307 aa10.46□□□□□ -0.73
TIMP1-201ENST00000218388 SHPKQ9UHJ6 478 aa10.46□□□□□ -0.73
TIMP1-201ENST00000218388 NIPBLQ6KC79 2804 aaeCLIP10.45□□□□□ -0.74
TIMP1-201ENST00000218388 TSPAN9O75954 239 aa10.45□□□□□ -0.74
TIMP1-201ENST00000218388 NDUFA7O95182 113 aa10.45□□□□□ -0.74
TIMP1-201ENST00000218388 CNIH1O95406 144 aa10.45□□□□□ -0.74
TIMP1-201ENST00000218388 CA2P00918 260 aa10.45□□□□□ -0.74
TIMP1-201ENST00000218388 VDAC1P21796 283 aa10.45□□□□□ -0.74
TIMP1-201ENST00000218388 MAS1LP35410 378 aa10.45□□□□□ -0.74
TIMP1-201ENST00000218388 BLCAPP62952 87 aa10.45□□□□□ -0.74
TIMP1-201ENST00000218388 PRSS8Q16651 343 aa10.45□□□□□ -0.74
TIMP1-201ENST00000218388 ANKRD55Q3KP44 614 aa10.45□□□□□ -0.74
TIMP1-201ENST00000218388 SLC35E3Q7Z769 313 aa10.45□□□□□ -0.74
TIMP1-201ENST00000218388 FOXRED2Q8IWF2 684 aa10.45□□□□□ -0.74
TIMP1-201ENST00000218388 SLC35G3Q8N808 338 aa10.45□□□□□ -0.74
TIMP1-201ENST00000218388 OR4F5Q8NH21 305 aa10.45□□□□□ -0.74
TIMP1-201ENST00000218388 OR4A16Q8NH70 328 aa10.45□□□□□ -0.74
TIMP1-201ENST00000218388 MITD1Q8WV92 249 aa10.45□□□□□ -0.74
TIMP1-201ENST00000218388 LSM10Q969L4 123 aaKnown RBP10.45□□□□□ -0.74
TIMP1-201ENST00000218388 CLCC1Q96S66 551 aa10.45□□□□□ -0.74
TIMP1-201ENST00000218388 TPSG1Q9NRR2 321 aa10.45□□□□□ -0.74
TIMP1-201ENST00000218388 MMP24Q9Y5R2 645 aa10.45□□□□□ -0.74
TIMP1-201ENST00000218388 SNRPGP15A8MWD9 76 aa10.44□□□□□ -0.74
TIMP1-201ENST00000218388 UPK2O00526 184 aa10.44□□□□□ -0.74
TIMP1-201ENST00000218388 RBMXL2O75526 392 aaKnown RBP10.44□□□□□ -0.74
TIMP1-201ENST00000218388 IFNA21P01568 189 aa10.44□□□□□ -0.74
TIMP1-201ENST00000218388 IGHG2P01859 326 aa10.44□□□□□ -0.74
TIMP1-201ENST00000218388 SPNP16150 400 aa10.44□□□□□ -0.74
TIMP1-201ENST00000218388 VDAC2P45880 294 aaPredicted RBP10.44□□□□□ -0.74
TIMP1-201ENST00000218388 GNB1P62873 340 aa10.44□□□□□ -0.74
TIMP1-201ENST00000218388 RPL8P62917 257 aaKnown RBP10.44□□□□□ -0.74
TIMP1-201ENST00000218388 SRSF2Q01130 221 aaKnown RBP10.44□□□□□ -0.74
TIMP1-201ENST00000218388 OXA1LQ15070 435 aa10.44□□□□□ -0.74
TIMP1-201ENST00000218388 TNXAQ16473 311 aa10.44□□□□□ -0.74
TIMP1-201ENST00000218388 ZNF562Q6V9R5 426 aa10.44□□□□□ -0.74
TIMP1-201ENST00000218388 Q6ZSV7 163 aa10.44□□□□□ -0.74
TIMP1-201ENST00000218388 PRIMA1Q86XR5 153 aa10.44□□□□□ -0.74
TIMP1-201ENST00000218388 Q8N2B8 174 aa10.44□□□□□ -0.74
TIMP1-201ENST00000218388 OR52B4Q8NGK2 314 aa10.44□□□□□ -0.74
TIMP1-201ENST00000218388 LHFPL5Q8TAF8 219 aa10.44□□□□□ -0.74
TIMP1-201ENST00000218388 ABHD5Q8WTS1 349 aa10.44□□□□□ -0.74
TIMP1-201ENST00000218388 SEC22CQ9BRL7 303 aa10.44□□□□□ -0.74
TIMP1-201ENST00000218388 ZNF430Q9H8G1 570 aaPredicted RBP10.44□□□□□ -0.74
TIMP1-201ENST00000218388 ZNF702PQ9H963 129 aa10.44□□□□□ -0.74
TIMP1-201ENST00000218388 FKBP11Q9NYL4 201 aa10.44□□□□□ -0.74
TIMP1-201ENST00000218388 PRR13Q9NZ81 148 aa10.44□□□□□ -0.74
TIMP1-201ENST00000218388 PRNDQ9UKY0 176 aa10.44□□□□□ -0.74
TIMP1-201ENST00000218388 TMED3Q9Y3Q3 217 aa10.44□□□□□ -0.74
TIMP1-201ENST00000218388 JMJD1CQ15652 2540 aa10.43□□□□□ -0.74
TIMP1-201ENST00000218388 IGHV7-81A0A0B4J1V7 117 aa10.43□□□□□ -0.74
TIMP1-201ENST00000218388 A0A1B0GUS0 222 aa10.43□□□□□ -0.74
TIMP1-201ENST00000218388 SH2D7A6NKC9 451 aaPredicted RBP10.43□□□□□ -0.74
TIMP1-201ENST00000218388 AP4M1O00189 453 aa10.43□□□□□ -0.74
TIMP1-201ENST00000218388 IGKV1-5P01602 117 aa10.43□□□□□ -0.74
TIMP1-201ENST00000218388 IL6RP08887 468 aaPredicted RBP10.43□□□□□ -0.74
TIMP1-201ENST00000218388 HKR1P10072 659 aa10.43□□□□□ -0.74
TIMP1-201ENST00000218388 HLA-GP17693 338 aa10.43□□□□□ -0.74
TIMP1-201ENST00000218388 RIPPLY3P57055 190 aa10.43□□□□□ -0.74
TIMP1-201ENST00000218388 CX3CL1P78423 397 aa10.43□□□□□ -0.74
TIMP1-201ENST00000218388 FXYD3Q14802 87 aa10.43□□□□□ -0.74
TIMP1-201ENST00000218388 THOC7Q6I9Y2 204 aaKnown RBP10.43□□□□□ -0.74
TIMP1-201ENST00000218388 LYZL2Q7Z4W2 148 aa10.43□□□□□ -0.74
TIMP1-201ENST00000218388 C12orf45Q8N5I9 185 aaPredicted RBP10.43□□□□□ -0.74
TIMP1-201ENST00000218388 ARPC1AQ92747 370 aa10.43□□□□□ -0.74
TIMP1-201ENST00000218388 SPIN2AQ99865 258 aa10.43□□□□□ -0.74
TIMP1-201ENST00000218388 SPIN2BQ9BPZ2 258 aa10.43□□□□□ -0.74
TIMP1-201ENST00000218388 PDCD10Q9BUL8 212 aa10.43□□□□□ -0.74
TIMP1-201ENST00000218388 COMMD5Q9GZQ3 224 aa10.43□□□□□ -0.74
TIMP1-201ENST00000218388 OR51J1Q9H342 316 aa10.43□□□□□ -0.74
TIMP1-201ENST00000218388 C16orf95Q9H693 158 aa10.43□□□□□ -0.74
TIMP1-201ENST00000218388 CACFD1Q9UGQ2 172 aa10.43□□□□□ -0.74
TIMP1-201ENST00000218388 C15orf61A6NNL5 157 aa10.42□□□□□ -0.74
TIMP1-201ENST00000218388 FCN1O00602 326 aa10.42□□□□□ -0.74
TIMP1-201ENST00000218388 OR9G9P0C7N8 305 aa10.42□□□□□ -0.74
TIMP1-201ENST00000218388 P0C879 139 aa10.42□□□□□ -0.74
TIMP1-201ENST00000218388 COMPP49747 757 aaPredicted RBP10.42□□□□□ -0.74
TIMP1-201ENST00000218388 RELBQ01201 579 aa10.42□□□□□ -0.74
TIMP1-201ENST00000218388 PJVKQ0ZLH3 352 aa10.42□□□□□ -0.74
TIMP1-201ENST00000218388 TATDN3Q17R31 274 aa10.42□□□□□ -0.74
TIMP1-201ENST00000218388 UXS1Q8NBZ7 420 aa10.42□□□□□ -0.74
TIMP1-201ENST00000218388 CHPT1Q8WUD6 406 aa10.42□□□□□ -0.74
TIMP1-201ENST00000218388 HSPB9Q9BQS6 159 aa10.42□□□□□ -0.74
TIMP1-201ENST00000218388 GON7Q9BXV9 100 aa10.42□□□□□ -0.74
TIMP1-201ENST00000218388 PARP11Q9NR21 331 aa10.42□□□□□ -0.74
TIMP1-201ENST00000218388 CUBNO60494 3623 aa10.41□□□□□ -0.74
TIMP1-201ENST00000218388 A0A1B0GU03 582 aa10.41□□□□□ -0.74
TIMP1-201ENST00000218388 HOXB5P09067 269 aa10.41□□□□□ -0.74
TIMP1-201ENST00000218388 SULT1A3P0DMM9 295 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms