RNA–Protein interactions for RNA: ENSMUST00000049184.8

Ushbp1-201, Transcript of Usher syndrome type-1C protein-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ushbp1, Length 2,438 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1-201ENSMUST00000049184 Smim37Q8BT35 56 aa12.78□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Rpp21Q8R040 150 aa12.78□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Olfr1384Q8VFA8 318 aa12.78□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 RabifQ91X96 123 aa12.78□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Mrgpra6Q91ZC6 301 aa12.78□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Mpv17lQ99MS3 194 aa12.78□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Nkain1Q9D035 207 aa12.78□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Chst1Q9EQC0 411 aa12.78□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Ighv1-47A0A0A6YY41 117 aa12.78□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Gm17333C6EQI3 125 aa12.78□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Gm3676D3Z236 184 aa12.78□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Pias3O54714 628 aa12.78□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Csn1s2bP02664 143 aa12.78□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Fkbp2P45878 140 aaKnown RBP12.78□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 FmodP50608 376 aa12.78□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Olfr1442Q0VEV7 312 aa12.78□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Mettl4Q3U034 471 aa12.78□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Gpr183Q3U6B2 357 aa12.78□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Gp49aQ61450 303 aa12.78□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Ifna15Q61718 190 aa12.78□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Ppp1r14dQ7TT52 146 aa12.78□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Tmem106bQ80X71 275 aa12.78□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Gje1Q9CX92 205 aa12.78□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Tmem170aQ9D342 144 aa12.78□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Herpud1Q9JJK5 391 aa12.78□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Jag2Q9QYE5 1247 aa12.78□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Cxcl15Q9WVL7 167 aa12.78□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Slurp1Q9Z0K7 110 aa12.78□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Cldn14Q9Z0S3 239 aa12.78□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Atoh7Q9Z2E5 149 aa12.78□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 RttnQ8R4Y8 2226 aa12.77□□□□□ -0.36
Ushbp1-201ENSMUST00000049184 Olfr709-ps1A0A140T8J9 307 aa12.77□□□□□ -0.37
Ushbp1-201ENSMUST00000049184 MiipA2A7Y5 387 aa12.77□□□□□ -0.37
Ushbp1-201ENSMUST00000049184 Yjefn3F6W8I0 251 aa12.77□□□□□ -0.37
Ushbp1-201ENSMUST00000049184 P01638 115 aa12.77□□□□□ -0.37
Ushbp1-201ENSMUST00000049184 LumP51885 338 aa12.77□□□□□ -0.37
Ushbp1-201ENSMUST00000049184 Cln5Q3UMW8 341 aa12.77□□□□□ -0.37
Ushbp1-201ENSMUST00000049184 H2al1nQ497L1 109 aa12.77□□□□□ -0.37
Ushbp1-201ENSMUST00000049184 AbraclQ4KML4 81 aa12.77□□□□□ -0.37
Ushbp1-201ENSMUST00000049184 MybphlQ5FW53 355 aa12.77□□□□□ -0.37
Ushbp1-201ENSMUST00000049184 Nhlh2Q64221 135 aa12.77□□□□□ -0.37
Ushbp1-201ENSMUST00000049184 Trappc6aQ78XR0 159 aa12.77□□□□□ -0.37
Ushbp1-201ENSMUST00000049184 Q80VP5 184 aa12.77□□□□□ -0.37
Ushbp1-201ENSMUST00000049184 TxnipQ8BG60 397 aa12.77□□□□□ -0.37
Ushbp1-201ENSMUST00000049184 Gpr153Q8K0Z9 631 aa12.77□□□□□ -0.37
Ushbp1-201ENSMUST00000049184 RfxapQ8VCG9 231 aa12.77□□□□□ -0.37
Ushbp1-201ENSMUST00000049184 Olfr460Q8VF31 314 aa12.77□□□□□ -0.37
Ushbp1-201ENSMUST00000049184 Sfxn3Q91V61 321 aa12.77□□□□□ -0.37
Ushbp1-201ENSMUST00000049184 Vmn1r40Q9EQ46 310 aa12.77□□□□□ -0.37
Ushbp1-201ENSMUST00000049184 Cd5lQ9QWK4 352 aa12.77□□□□□ -0.37
Ushbp1-201ENSMUST00000049184 Adamts20P59511 1906 aa12.77□□□□□ -0.37
Ushbp1-201ENSMUST00000049184 Trav6d-5A0A075B6B9 112 aa12.77□□□□□ -0.37
Ushbp1-201ENSMUST00000049184 Gm21616B6ZB74 166 aa12.77□□□□□ -0.37
Ushbp1-201ENSMUST00000049184 H2-M10.1O19443 331 aa12.77□□□□□ -0.37
Ushbp1-201ENSMUST00000049184 Klrd1O54707 179 aa12.77□□□□□ -0.37
Ushbp1-201ENSMUST00000049184 Mtatp6P00848 226 aa12.77□□□□□ -0.37
Ushbp1-201ENSMUST00000049184 MyogP12979 224 aa12.77□□□□□ -0.37
Ushbp1-201ENSMUST00000049184 Hspb1P14602 209 aaKnown RBP12.77□□□□□ -0.37
Ushbp1-201ENSMUST00000049184 Ctdsp1P58466 261 aa12.77□□□□□ -0.37
Ushbp1-201ENSMUST00000049184 St8sia5P70126 412 aa12.77□□□□□ -0.37
Ushbp1-201ENSMUST00000049184 NptnP97300 397 aa12.77□□□□□ -0.37
Ushbp1-201ENSMUST00000049184 Olfr1507Q0VEP0 313 aa12.77□□□□□ -0.37
Ushbp1-201ENSMUST00000049184 Lhfpl4Q5U4E0 247 aa12.77□□□□□ -0.37
Ushbp1-201ENSMUST00000049184 Olfr987Q7TRA2 309 aa12.77□□□□□ -0.37
Ushbp1-201ENSMUST00000049184 Olfr222Q7TS30 318 aa12.77□□□□□ -0.37
Ushbp1-201ENSMUST00000049184 Zfp729bQ80VN4 1045 aa12.77□□□□□ -0.37
Ushbp1-201ENSMUST00000049184 Tmem212Q8C6V3 187 aa12.77□□□□□ -0.37
Ushbp1-201ENSMUST00000049184 Vmn1r220Q8R272 298 aa12.77□□□□□ -0.37
Ushbp1-201ENSMUST00000049184 Ear10Q923L6 156 aa12.77□□□□□ -0.37
Ushbp1-201ENSMUST00000049184 Olfr926Q9EQ98 308 aa12.77□□□□□ -0.37
Ushbp1-201ENSMUST00000049184 HpgdsQ9JHF7 199 aa12.77□□□□□ -0.37
Ushbp1-201ENSMUST00000049184 Gm42543A0A0G2JET4 117 aa12.76□□□□□ -0.37
Ushbp1-201ENSMUST00000049184 4930435E12RikA6X8Z9 381 aa12.76□□□□□ -0.37
Ushbp1-201ENSMUST00000049184 Gm21834J3QN05 151 aa12.76□□□□□ -0.37
Ushbp1-201ENSMUST00000049184 Pdcd6P12815 191 aaKnown RBP12.76□□□□□ -0.37
Ushbp1-201ENSMUST00000049184 Hist1h1aP43275 213 aa12.76□□□□□ -0.37
Ushbp1-201ENSMUST00000049184 Otx1P80205 355 aa12.76□□□□□ -0.37
Ushbp1-201ENSMUST00000049184 Apobec4Q497M3 374 aa12.76□□□□□ -0.37
Ushbp1-201ENSMUST00000049184 Slc25a35Q5SWT3 300 aa12.76□□□□□ -0.37
Ushbp1-201ENSMUST00000049184 Lefty1Q64280 368 aa12.76□□□□□ -0.37
Ushbp1-201ENSMUST00000049184 Cd200r1lQ6XJV6 249 aa12.76□□□□□ -0.37
Ushbp1-201ENSMUST00000049184 Olfr1000Q7TR99 314 aa12.76□□□□□ -0.37
Ushbp1-201ENSMUST00000049184 Saxo2Q8BQB6 394 aa12.76□□□□□ -0.37
Ushbp1-201ENSMUST00000049184 Tmem186Q9CR76 216 aa12.76□□□□□ -0.37
Ushbp1-201ENSMUST00000049184 Dtwd2Q9D0U1 298 aa12.76□□□□□ -0.37
Ushbp1-201ENSMUST00000049184 Ndufb10Q9DCS9 176 aa12.76□□□□□ -0.37
Ushbp1-201ENSMUST00000049184 Mettl9Q9EPL4 318 aa12.76□□□□□ -0.37
Ushbp1-201ENSMUST00000049184 Fbxo6Q9QZN4 295 aa12.76□□□□□ -0.37
Ushbp1-201ENSMUST00000049184 Wif1Q9WUA1 379 aa12.76□□□□□ -0.37
Ushbp1-201ENSMUST00000049184 Gpr179E9PY61 2293 aa12.76□□□□□ -0.37
Ushbp1-201ENSMUST00000049184 Lama2Q60675 3118 aaKnown RBP12.76□□□□□ -0.37
Ushbp1-201ENSMUST00000049184 Igkv12-89A0A0G2JGW8 112 aa12.76□□□□□ -0.37
Ushbp1-201ENSMUST00000049184 Gm45800A0A1B0GT24 152 aa12.76□□□□□ -0.37
Ushbp1-201ENSMUST00000049184 Gm12887B1AVM1 119 aa12.76□□□□□ -0.37
Ushbp1-201ENSMUST00000049184 A630073D07RikE9PWS6 100 aa12.76□□□□□ -0.37
Ushbp1-201ENSMUST00000049184 Pax1P09084 446 aa12.76□□□□□ -0.37
Ushbp1-201ENSMUST00000049184 Fgf8P37237 268 aa12.76□□□□□ -0.37
Ushbp1-201ENSMUST00000049184 Hist1h3aP68433 136 aa12.76□□□□□ -0.37
Ushbp1-201ENSMUST00000049184 Exosc6Q8BTW3 273 aa12.76□□□□□ -0.37
Ushbp1-201ENSMUST00000049184 FuomQ8R2K1 153 aa12.76□□□□□ -0.37
Retrieved 100 of 22,080 RNA–protein pairs in 33.1 ms