RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 HLA-DRB1P01911 266 aa10.43□□□□□ -0.74
GTF3A-209ENST00000640289 SAA1P0DJI8 122 aaPredicted RBP10.43□□□□□ -0.74
GTF3A-209ENST00000640289 S100GP29377 79 aa10.43□□□□□ -0.74
GTF3A-209ENST00000640289 ECI1P42126 302 aa10.43□□□□□ -0.74
GTF3A-209ENST00000640289 LPAR6P43657 344 aa10.43□□□□□ -0.74
GTF3A-209ENST00000640289 CCR6P51684 374 aa10.43□□□□□ -0.74
GTF3A-209ENST00000640289 KRTAP10-3P60369 221 aa10.43□□□□□ -0.74
GTF3A-209ENST00000640289 PJVKQ0ZLH3 352 aa10.43□□□□□ -0.74
GTF3A-209ENST00000640289 ZNF585BQ52M93 769 aa10.43□□□□□ -0.74
GTF3A-209ENST00000640289 SSX9Q7RTT3 188 aa10.43□□□□□ -0.74
GTF3A-209ENST00000640289 KLHDC1Q8N7A1 406 aa10.43□□□□□ -0.74
GTF3A-209ENST00000640289 POC5Q8NA72 575 aa10.43□□□□□ -0.74
GTF3A-209ENST00000640289 ADAD2Q8NCV1 583 aaKnown RBP10.43□□□□□ -0.74
GTF3A-209ENST00000640289 NOL4LQ96MY1 436 aaPredicted RBP10.43□□□□□ -0.74
GTF3A-209ENST00000640289 COPZ2Q9P299 210 aa10.43□□□□□ -0.74
GTF3A-209ENST00000640289 C14orf166Q9Y224 244 aaKnown RBP10.43□□□□□ -0.74
GTF3A-209ENST00000640289 NAP1L6A6NFF2 107 aa10.42□□□□□ -0.74
GTF3A-209ENST00000640289 HPRT1P00492 218 aa10.42□□□□□ -0.74
GTF3A-209ENST00000640289 CA2P00918 260 aa10.42□□□□□ -0.74
GTF3A-209ENST00000640289 RPA2P15927 270 aa10.42□□□□□ -0.74
GTF3A-209ENST00000640289 BTCP35070 178 aa10.42□□□□□ -0.74
GTF3A-209ENST00000640289 UBE2KP61086 200 aa10.42□□□□□ -0.74
GTF3A-209ENST00000640289 NDPQ00604 133 aa10.42□□□□□ -0.74
GTF3A-209ENST00000640289 SRSF4Q08170 494 aaKnown RBP10.42□□□□□ -0.74
GTF3A-209ENST00000640289 MRGPRG-AS1Q2M3A8 158 aa10.42□□□□□ -0.74
GTF3A-209ENST00000640289 VMA21Q3ZAQ7 101 aa10.42□□□□□ -0.74
GTF3A-209ENST00000640289 HIST2H2BDQ6DRA6 164 aa10.42□□□□□ -0.74
GTF3A-209ENST00000640289 C10orf99Q6UWK7 81 aa10.42□□□□□ -0.74
GTF3A-209ENST00000640289 PPP1R27Q86WC6 154 aa10.42□□□□□ -0.74
GTF3A-209ENST00000640289 CCDC71LQ8N9Z2 235 aa10.42□□□□□ -0.74
GTF3A-209ENST00000640289 WFDC12Q8WWY7 111 aa10.42□□□□□ -0.74
GTF3A-209ENST00000640289 TMEM230Q96A57 120 aa10.42□□□□□ -0.74
GTF3A-209ENST00000640289 TP53RKQ96S44 253 aa10.42□□□□□ -0.74
GTF3A-209ENST00000640289 WNT10AQ9GZT5 417 aa10.42□□□□□ -0.74
GTF3A-209ENST00000640289 C3orf85A0A1B0GTC6 90 aa10.41□□□□□ -0.74
GTF3A-209ENST00000640289 IGKV1-39P01597 117 aa10.41□□□□□ -0.74
GTF3A-209ENST00000640289 IGKV1D-39P04432 117 aa10.41□□□□□ -0.74
GTF3A-209ENST00000640289 CX3CL1P78423 397 aa10.41□□□□□ -0.74
GTF3A-209ENST00000640289 SSBP2P81877 361 aaPredicted RBP10.41□□□□□ -0.74
GTF3A-209ENST00000640289 IFITM3Q01628 133 aa10.41□□□□□ -0.74
GTF3A-209ENST00000640289 SP6Q3SY56 376 aa10.41□□□□□ -0.74
GTF3A-209ENST00000640289 PUSL1Q8N0Z8 303 aaKnown RBP10.41□□□□□ -0.74
GTF3A-209ENST00000640289 TCTEX1D1Q8N7M0 179 aa10.41□□□□□ -0.74
GTF3A-209ENST00000640289 TEX45Q8NA69 505 aa10.41□□□□□ -0.74
GTF3A-209ENST00000640289 CD300LFQ8TDQ1 290 aa10.41□□□□□ -0.74
GTF3A-209ENST00000640289 RHOVQ96L33 236 aa10.41□□□□□ -0.74
GTF3A-209ENST00000640289 C7orf50Q9BRJ6 194 aaKnown RBP10.41□□□□□ -0.74
GTF3A-209ENST00000640289 OR51J1Q9H342 316 aa10.41□□□□□ -0.74
GTF3A-209ENST00000640289 PARP11Q9NR21 331 aa10.41□□□□□ -0.74
GTF3A-209ENST00000640289 FBXO7Q9Y3I1 522 aa10.41□□□□□ -0.74
GTF3A-209ENST00000640289 ATRQ13535 2644 aa10.41□□□□□ -0.74
GTF3A-209ENST00000640289 CENPXA8MT69 81 aa10.4□□□□□ -0.74
GTF3A-209ENST00000640289 H0Y980 276 aa10.4□□□□□ -0.74
GTF3A-209ENST00000640289 ARPC1BO15143 372 aaKnown RBP10.4□□□□□ -0.74
GTF3A-209ENST00000640289 ATP6V0E1O15342 81 aa10.4□□□□□ -0.74
GTF3A-209ENST00000640289 LYRM1O43325 122 aa10.4□□□□□ -0.74
GTF3A-209ENST00000640289 KCNAB3O43448 404 aa10.4□□□□□ -0.74
GTF3A-209ENST00000640289 UPK1BO75841 260 aa10.4□□□□□ -0.74
GTF3A-209ENST00000640289 HRASP01112 189 aa10.4□□□□□ -0.74
GTF3A-209ENST00000640289 NQO2P16083 231 aa10.4□□□□□ -0.74
GTF3A-209ENST00000640289 TAS2R31P59538 309 aa10.4□□□□□ -0.74
GTF3A-209ENST00000640289 GNB1P62873 340 aa10.4□□□□□ -0.74
GTF3A-209ENST00000640289 OR4A47Q6IF82 309 aa10.4□□□□□ -0.74
GTF3A-209ENST00000640289 FOXRED2Q8IWF2 684 aa10.4□□□□□ -0.74
GTF3A-209ENST00000640289 STPG2Q8N412 459 aa10.4□□□□□ -0.74
GTF3A-209ENST00000640289 C3orf56Q8N813 242 aa10.4□□□□□ -0.74
GTF3A-209ENST00000640289 C11orf44Q8N8P7 122 aa10.4□□□□□ -0.74
GTF3A-209ENST00000640289 WIPF2Q8TF74 440 aaPredicted RBP10.4□□□□□ -0.74
GTF3A-209ENST00000640289 R3HDM4Q96D70 268 aa10.4□□□□□ -0.74
GTF3A-209ENST00000640289 SCGB3A2Q96PL1 93 aa10.4□□□□□ -0.74
GTF3A-209ENST00000640289 FAM103A1Q9BTL3 118 aaKnown RBP10.4□□□□□ -0.74
GTF3A-209ENST00000640289 NAA60Q9H7X0 242 aa10.4□□□□□ -0.74
GTF3A-209ENST00000640289 ZNF430Q9H8G1 570 aaPredicted RBP10.4□□□□□ -0.74
GTF3A-209ENST00000640289 PLEKHA2Q9HB19 425 aa10.4□□□□□ -0.74
GTF3A-209ENST00000640289 COMMD9Q9P000 198 aa10.4□□□□□ -0.74
GTF3A-209ENST00000640289 TBC1D24Q9ULP9 559 aa10.4□□□□□ -0.74
GTF3A-209ENST00000640289 TRAV3A0A0B4J244 114 aa10.39□□□□□ -0.75
GTF3A-209ENST00000640289 TEX13DA0A0J9YY54 714 aaPredicted RBP10.39□□□□□ -0.75
GTF3A-209ENST00000640289 CRYM-AS1A6NIL9 109 aa10.39□□□□□ -0.75
GTF3A-209ENST00000640289 MARCH11A6NNE9 402 aa10.39□□□□□ -0.75
GTF3A-209ENST00000640289 AP4M1O00189 453 aa10.39□□□□□ -0.75
GTF3A-209ENST00000640289 KBTBD11O94819 623 aa10.39□□□□□ -0.75
GTF3A-209ENST00000640289 OR2A4O95047 310 aa10.39□□□□□ -0.75
GTF3A-209ENST00000640289 KRASP01116 189 aa10.39□□□□□ -0.75
GTF3A-209ENST00000640289 OR5AC1P0C628 307 aa10.39□□□□□ -0.75
GTF3A-209ENST00000640289 AKR1C4P17516 323 aa10.39□□□□□ -0.75
GTF3A-209ENST00000640289 G6PCP35575 357 aa10.39□□□□□ -0.75
GTF3A-209ENST00000640289 FXYD3Q14802 87 aa10.39□□□□□ -0.75
GTF3A-209ENST00000640289 RBMS2Q15434 407 aaKnown RBP10.39□□□□□ -0.75
GTF3A-209ENST00000640289 TNXAQ16473 311 aa10.39□□□□□ -0.75
GTF3A-209ENST00000640289 PRSS8Q16651 343 aa10.39□□□□□ -0.75
GTF3A-209ENST00000640289 ZNF562Q6V9R5 426 aa10.39□□□□□ -0.75
GTF3A-209ENST00000640289 TMED4Q7Z7H5 227 aa10.39□□□□□ -0.75
GTF3A-209ENST00000640289 CENPVQ7Z7K6 275 aaPredicted RBP10.39□□□□□ -0.75
GTF3A-209ENST00000640289 ZNF329Q86UD4 541 aa10.39□□□□□ -0.75
GTF3A-209ENST00000640289 DMBX1Q8NFW5 382 aa10.39□□□□□ -0.75
GTF3A-209ENST00000640289 TMEM167AQ8TBQ9 72 aa10.39□□□□□ -0.75
GTF3A-209ENST00000640289 ABHD5Q8WTS1 349 aa10.39□□□□□ -0.75
GTF3A-209ENST00000640289 OR2A7Q96R45 310 aa10.39□□□□□ -0.75
GTF3A-209ENST00000640289 SLC25A21Q9BQT8 299 aaPredicted RBP10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms