RNA–Protein interactions for RNA: ENST00000637709.2

SCN8A-214, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 5

Gene SCN8A, Length 2,489 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-214ENST00000637709 IDI2-AS1Q9NZ38 188 aa12.6□□□□□ -0.39
SCN8A-214ENST00000637709 CACNA1AO00555 2505 aa12.59□□□□□ -0.39
SCN8A-214ENST00000637709 DVL1O14640 695 aa12.59□□□□□ -0.39
SCN8A-214ENST00000637709 TMEM200BQ69YZ2 307 aa12.59□□□□□ -0.39
SCN8A-214ENST00000637709 SEC11CQ9BY50 192 aa12.59□□□□□ -0.39
SCN8A-214ENST00000637709 EGLN1Q9GZT9 426 aa12.59□□□□□ -0.39
SCN8A-214ENST00000637709 CELSR2Q9HCU4 2923 aa12.59□□□□□ -0.39
SCN8A-214ENST00000637709 TRAV38-1A0A0B4J264 116 aa12.59□□□□□ -0.39
SCN8A-214ENST00000637709 NKX6-3A6NJ46 265 aa12.59□□□□□ -0.39
SCN8A-214ENST00000637709 AVPI1Q5T686 147 aa12.59□□□□□ -0.39
SCN8A-214ENST00000637709 ABHD12Q8N2K0 398 aa12.59□□□□□ -0.39
SCN8A-214ENST00000637709 ZCCHC14Q8WYQ9 949 aaKnown RBP12.59□□□□□ -0.39
SCN8A-214ENST00000637709 RAB29O14966 203 aa12.58□□□□□ -0.4
SCN8A-214ENST00000637709 UCNP55089 124 aa12.58□□□□□ -0.4
SCN8A-214ENST00000637709 ZNF726P1Q15940 193 aa12.58□□□□□ -0.4
SCN8A-214ENST00000637709 TMEM14EPQ6UXP3 125 aa12.58□□□□□ -0.4
SCN8A-214ENST00000637709 OR4A16Q8NH70 328 aa12.58□□□□□ -0.4
SCN8A-214ENST00000637709 CD300LFQ8TDQ1 290 aa12.58□□□□□ -0.4
SCN8A-214ENST00000637709 COA4Q9NYJ1 87 aa12.58□□□□□ -0.4
SCN8A-214ENST00000637709 DFFBO76075 338 aa12.57□□□□□ -0.4
SCN8A-214ENST00000637709 HPRT1P00492 218 aa12.57□□□□□ -0.4
SCN8A-214ENST00000637709 IGKV1D-33P01593 117 aa12.57□□□□□ -0.4
SCN8A-214ENST00000637709 IGKV1-33P01594 117 aa12.57□□□□□ -0.4
SCN8A-214ENST00000637709 HBG1P69891 147 aa12.57□□□□□ -0.4
SCN8A-214ENST00000637709 HBG2P69892 147 aa12.57□□□□□ -0.4
SCN8A-214ENST00000637709 ZNF439Q8NDP4 499 aa12.57□□□□□ -0.4
SCN8A-214ENST00000637709 RHOVQ96L33 236 aa12.57□□□□□ -0.4
SCN8A-214ENST00000637709 NGBQ9NPG2 151 aa12.57□□□□□ -0.4
SCN8A-214ENST00000637709 STRAPQ9Y3F4 350 aaKnown RBP12.57□□□□□ -0.4
SCN8A-214ENST00000637709 IGHV1-69-2A0A0G2JMI3 117 aa12.57□□□□□ -0.4
SCN8A-214ENST00000637709 SMCO3A2RU48 225 aa12.57□□□□□ -0.4
SCN8A-214ENST00000637709 RRHO14718 337 aa12.57□□□□□ -0.4
SCN8A-214ENST00000637709 RAB2AP61019 212 aa12.57□□□□□ -0.4
SCN8A-214ENST00000637709 C10orf91Q5T1B1 145 aa12.57□□□□□ -0.4
SCN8A-214ENST00000637709 MUC15Q8N387 334 aa12.57□□□□□ -0.4
SCN8A-214ENST00000637709 DDB2Q92466 427 aa12.57□□□□□ -0.4
SCN8A-214ENST00000637709 GNPNAT1Q96EK6 184 aaPredicted RBP12.57□□□□□ -0.4
SCN8A-214ENST00000637709 WDR61Q9GZS3 305 aaKnown RBP12.57□□□□□ -0.4
SCN8A-214ENST00000637709 CARHSP1Q9Y2V2 147 aaKnown RBP12.57□□□□□ -0.4
SCN8A-214ENST00000637709 PRELID3BQ9Y3B1 194 aa12.57□□□□□ -0.4
SCN8A-214ENST00000637709 ZFP92A6NM28 416 aa12.56□□□□□ -0.4
SCN8A-214ENST00000637709 SRRM4A7MD48 611 aaKnown RBP12.56□□□□□ -0.4
SCN8A-214ENST00000637709 CHRNB4P30926 498 aa12.56□□□□□ -0.4
SCN8A-214ENST00000637709 APOBEC3AP31941 199 aaPredicted RBP12.56□□□□□ -0.4
SCN8A-214ENST00000637709 RXFP4Q8TDU9 374 aa12.56□□□□□ -0.4
SCN8A-214ENST00000637709 IGFBPL1Q8WX77 278 aa12.56□□□□□ -0.4
SCN8A-214ENST00000637709 GNG13Q9P2W3 67 aa12.56□□□□□ -0.4
SCN8A-214ENST00000637709 NDRG3Q9UGV2 375 aa12.56□□□□□ -0.4
SCN8A-214ENST00000637709 LOC105371267A0A1B0GV96 52 aa12.56□□□□□ -0.4
SCN8A-214ENST00000637709 hADV38S2A0JD32 116 aa12.56□□□□□ -0.4
SCN8A-214ENST00000637709 PMS2P5A8MQ11 134 aa12.56□□□□□ -0.4
SCN8A-214ENST00000637709 NUDT19A8MXV4 375 aa12.56□□□□□ -0.4
SCN8A-214ENST00000637709 IFNA10P01566 189 aa12.56□□□□□ -0.4
SCN8A-214ENST00000637709 RAB5CP51148 216 aa12.56□□□□□ -0.4
SCN8A-214ENST00000637709 LRRC75BQ2VPJ9 315 aa12.56□□□□□ -0.4
SCN8A-214ENST00000637709 OR4A47Q6IF82 309 aa12.56□□□□□ -0.4
SCN8A-214ENST00000637709 ZNF714Q96N38 554 aa12.56□□□□□ -0.4
SCN8A-214ENST00000637709 RPUSD1Q9UJJ7 312 aaKnown RBP12.56□□□□□ -0.4
SCN8A-214ENST00000637709 ZNF729A6NN14 1252 aaPredicted RBP12.55□□□□□ -0.4
SCN8A-214ENST00000637709 C15orf62A8K5M9 175 aa12.55□□□□□ -0.4
SCN8A-214ENST00000637709 TRIM77I1YAP6 450 aa12.55□□□□□ -0.4
SCN8A-214ENST00000637709 M0R036 132 aa12.55□□□□□ -0.4
SCN8A-214ENST00000637709 DLL1O00548 723 aa12.55□□□□□ -0.4
SCN8A-214ENST00000637709 SNRNP70P08621 437 aaKnown RBP12.55□□□□□ -0.4
SCN8A-214ENST00000637709 CT45A6P0DMU7 189 aa12.55□□□□□ -0.4
SCN8A-214ENST00000637709 CT45A5P0DMU8 189 aa12.55□□□□□ -0.4
SCN8A-214ENST00000637709 CT45A7P0DMV0 189 aa12.55□□□□□ -0.4
SCN8A-214ENST00000637709 UQCRFS1P47985 274 aa12.55□□□□□ -0.4
SCN8A-214ENST00000637709 ERVK-16P61578 105 aa12.55□□□□□ -0.4
SCN8A-214ENST00000637709 RELBQ01201 579 aa12.55□□□□□ -0.4
SCN8A-214ENST00000637709 GCSAMLQ5JQS6 135 aa12.55□□□□□ -0.4
SCN8A-214ENST00000637709 ACSM6Q6P461 480 aa12.55□□□□□ -0.4
SCN8A-214ENST00000637709 ST6GALNAC3Q8NDV1 305 aa12.55□□□□□ -0.4
SCN8A-214ENST00000637709 TAF15Q92804 592 aaKnown RBP eCLIP12.55□□□□□ -0.4
SCN8A-214ENST00000637709 FAM122AQ96E09 287 aa12.55□□□□□ -0.4
SCN8A-214ENST00000637709 HEYLQ9NQ87 328 aaPredicted RBP12.55□□□□□ -0.4
SCN8A-214ENST00000637709 ABCA1O95477 2261 aa12.55□□□□□ -0.4
SCN8A-214ENST00000637709 UMAD1C9J7I0 102 aa12.55□□□□□ -0.4
SCN8A-214ENST00000637709 H7C2Y5 167 aa12.55□□□□□ -0.4
SCN8A-214ENST00000637709 NDUFB3O43676 98 aa12.55□□□□□ -0.4
SCN8A-214ENST00000637709 NQO2P16083 231 aa12.55□□□□□ -0.4
SCN8A-214ENST00000637709 FGF7P21781 194 aa12.55□□□□□ -0.4
SCN8A-214ENST00000637709 MRPL20Q9BYC9 149 aaKnown RBP12.55□□□□□ -0.4
SCN8A-214ENST00000637709 TMPRSS5Q9H3S3 457 aa12.55□□□□□ -0.4
SCN8A-214ENST00000637709 SLC25A22Q9H936 323 aa12.55□□□□□ -0.4
SCN8A-214ENST00000637709 PUS1Q9Y606 427 aaKnown RBP eCLIP12.55□□□□□ -0.4
SCN8A-214ENST00000637709 LINC00312Q9Y6C7 94 aa12.55□□□□□ -0.4
SCN8A-214ENST00000637709 IGHV3-72A0A0B4J1Y9 119 aa12.54□□□□□ -0.4
SCN8A-214ENST00000637709 RBFOX3A6NFN3 312 aa12.54□□□□□ -0.4
SCN8A-214ENST00000637709 FAM90A26D6RGX4 464 aa12.54□□□□□ -0.4
SCN8A-214ENST00000637709 RAB7AP51149 207 aa12.54□□□□□ -0.4
SCN8A-214ENST00000637709 C1orf87Q8N0U7 546 aa12.54□□□□□ -0.4
SCN8A-214ENST00000637709 CLRN3Q8NCR9 226 aa12.54□□□□□ -0.4
SCN8A-214ENST00000637709 OR10P1Q8NGE3 313 aa12.54□□□□□ -0.4
SCN8A-214ENST00000637709 ISOC2Q96AB3 205 aa12.54□□□□□ -0.4
SCN8A-214ENST00000637709 RCC1LQ96I51 464 aaKnown RBP12.54□□□□□ -0.4
SCN8A-214ENST00000637709 MS4A5Q9H3V2 200 aa12.54□□□□□ -0.4
SCN8A-214ENST00000637709 PIGBOS1A0A0B4J2F0 54 aa12.54□□□□□ -0.4
SCN8A-214ENST00000637709 SNAPINO95295 136 aa12.54□□□□□ -0.4
SCN8A-214ENST00000637709 PAX6P26367 422 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms