RNA–Protein interactions for RNA: ENST00000631247.1

UBE3A-223, Transcript of ubiquitin protein ligase E3A, human

TSL 5

Gene UBE3A, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE3A-223	ENST00000631247	KLF5	Q13887	457 aa	Predicted RBP	7.92	□□□□□ -1.14
UBE3A-223	ENST00000631247	ARL6IP1	Q15041	203 aa		7.92	□□□□□ -1.14
UBE3A-223	ENST00000631247	TMEM177	Q53S58	311 aa		7.92	□□□□□ -1.14
UBE3A-223	ENST00000631247	ZFAND6	Q6FIF0	208 aa		7.92	□□□□□ -1.14
UBE3A-223	ENST00000631247	ZNF367	Q7RTV3	350 aa		7.92	□□□□□ -1.14
UBE3A-223	ENST00000631247	SNAPC3	Q92966	411 aa		7.92	□□□□□ -1.14
UBE3A-223	ENST00000631247	SPATA25	Q9BR10	227 aa		7.92	□□□□□ -1.14
UBE3A-223	ENST00000631247	DCUN1D5	Q9BTE7	237 aa		7.92	□□□□□ -1.14
UBE3A-223	ENST00000631247	VCX3B	Q9H321	246 aa		7.92	□□□□□ -1.14
UBE3A-223	ENST00000631247	PEMT	Q9UBM1	199 aa		7.92	□□□□□ -1.14
UBE3A-223	ENST00000631247	ZNF230	Q9UIE0	474 aa	Predicted RBP	7.92	□□□□□ -1.14
UBE3A-223	ENST00000631247	PLEC	Q15149	4684 aa	Known RBP	7.91	□□□□□ -1.14
UBE3A-223	ENST00000631247	EPPK1	P58107	5090 aa	Known RBP	7.91	□□□□□ -1.14
UBE3A-223	ENST00000631247	MSGN1	A6NI15	193 aa		7.91	□□□□□ -1.14
UBE3A-223	ENST00000631247	IFITM5	A6NNB3	132 aa		7.91	□□□□□ -1.14
UBE3A-223	ENST00000631247		J3QRK9	145 aa		7.91	□□□□□ -1.14
UBE3A-223	ENST00000631247	TUSC2	O75896	110 aa		7.91	□□□□□ -1.14
UBE3A-223	ENST00000631247	OR2A4	O95047	310 aa		7.91	□□□□□ -1.14
UBE3A-223	ENST00000631247	BRI3	O95415	125 aa		7.91	□□□□□ -1.14
UBE3A-223	ENST00000631247	IFNA6	P05013	189 aa		7.91	□□□□□ -1.14
UBE3A-223	ENST00000631247	CRYGB	P07316	175 aa		7.91	□□□□□ -1.14
UBE3A-223	ENST00000631247	RAB3B	P20337	219 aa		7.91	□□□□□ -1.14
UBE3A-223	ENST00000631247	RAB6A	P20340	208 aa		7.91	□□□□□ -1.14
UBE3A-223	ENST00000631247	CRHBP	P24387	322 aa		7.91	□□□□□ -1.14
UBE3A-223	ENST00000631247	OR10A3	P58181	314 aa		7.91	□□□□□ -1.14
UBE3A-223	ENST00000631247	UBE2K	P61086	200 aa		7.91	□□□□□ -1.14
UBE3A-223	ENST00000631247	SUMO1	P63165	101 aa	Known RBP	7.91	□□□□□ -1.14
UBE3A-223	ENST00000631247	DYRK1A	Q13627	763 aa		7.91	□□□□□ -1.14
UBE3A-223	ENST00000631247	EXOSC2	Q13868	293 aa	Known RBP	7.91	□□□□□ -1.14
UBE3A-223	ENST00000631247	TBCE	Q15813	527 aa	Predicted RBP	7.91	□□□□□ -1.14
UBE3A-223	ENST00000631247	PRSS8	Q16651	343 aa		7.91	□□□□□ -1.14
UBE3A-223	ENST00000631247	ZNF343	Q6P1L6	599 aa		7.91	□□□□□ -1.14
UBE3A-223	ENST00000631247	IDO2	Q6ZQW0	420 aa		7.91	□□□□□ -1.14
UBE3A-223	ENST00000631247	KCTD9	Q7L273	389 aa		7.91	□□□□□ -1.14
UBE3A-223	ENST00000631247		Q8N1Y9	231 aa		7.91	□□□□□ -1.14
UBE3A-223	ENST00000631247		Q8N402	240 aa		7.91	□□□□□ -1.14
UBE3A-223	ENST00000631247	TEX45	Q8NA69	505 aa		7.91	□□□□□ -1.14
UBE3A-223	ENST00000631247	OSR1	Q8TAX0	266 aa	Predicted RBP	7.91	□□□□□ -1.14
UBE3A-223	ENST00000631247	DYNLRB2	Q8TF09	96 aa		7.91	□□□□□ -1.14
UBE3A-223	ENST00000631247	SRSF12	Q8WXF0	261 aa	Known RBP	7.91	□□□□□ -1.14
UBE3A-223	ENST00000631247	SPIN2A	Q99865	258 aa		7.91	□□□□□ -1.14
UBE3A-223	ENST00000631247	SPIN2B	Q9BPZ2	258 aa		7.91	□□□□□ -1.14
UBE3A-223	ENST00000631247	ATG5	Q9H1Y0	275 aa		7.91	□□□□□ -1.14
UBE3A-223	ENST00000631247	NKX1-2	Q9UD57	310 aa	Predicted RBP	7.91	□□□□□ -1.14
UBE3A-223	ENST00000631247	MRPS7	Q9Y2R9	242 aa	Known RBP	7.91	□□□□□ -1.14
UBE3A-223	ENST00000631247	KCNK7	Q9Y2U2	307 aa		7.91	□□□□□ -1.14
UBE3A-223	ENST00000631247	TRAV1-2	A0A0B4J238	106 aa		7.9	□□□□□ -1.14
UBE3A-223	ENST00000631247	FAM223B	A6NKX1	122 aa		7.9	□□□□□ -1.14
UBE3A-223	ENST00000631247		A8MZ25	164 aa		7.9	□□□□□ -1.14
UBE3A-223	ENST00000631247	TRBV12-3	P01733	135 aa		7.9	□□□□□ -1.14
UBE3A-223	ENST00000631247	CD36	P16671	472 aa		7.9	□□□□□ -1.14
UBE3A-223	ENST00000631247	DUT	P33316	252 aa	Known RBP	7.9	□□□□□ -1.14
UBE3A-223	ENST00000631247	HSPA13	P48723	471 aa		7.9	□□□□□ -1.14
UBE3A-223	ENST00000631247	RHOG	P84095	191 aa		7.9	□□□□□ -1.14
UBE3A-223	ENST00000631247	OR2B11	Q5JQS5	317 aa		7.9	□□□□□ -1.14
UBE3A-223	ENST00000631247	FAM223A	Q8IWN6	122 aa		7.9	□□□□□ -1.14
UBE3A-223	ENST00000631247	MMD2	Q8IY49	270 aa		7.9	□□□□□ -1.14
UBE3A-223	ENST00000631247	ADAD2	Q8NCV1	583 aa	Known RBP	7.9	□□□□□ -1.14
UBE3A-223	ENST00000631247	NRG4	Q8WWG1	115 aa		7.9	□□□□□ -1.14
UBE3A-223	ENST00000631247	C5orf30	Q96GV9	206 aa		7.9	□□□□□ -1.14
UBE3A-223	ENST00000631247	CNBD2	Q96M20	576 aa		7.9	□□□□□ -1.14
UBE3A-223	ENST00000631247	C19orf73	Q9NVV2	129 aa		7.9	□□□□□ -1.14
UBE3A-223	ENST00000631247	PRELID3B	Q9Y3B1	194 aa		7.9	□□□□□ -1.14
UBE3A-223	ENST00000631247	DPPA5	A6NC42	116 aa		7.89	□□□□□ -1.15
UBE3A-223	ENST00000631247	SRRM4	A7MD48	611 aa	Known RBP	7.89	□□□□□ -1.15
UBE3A-223	ENST00000631247	RAB27B	O00194	218 aa		7.89	□□□□□ -1.15
UBE3A-223	ENST00000631247	AIRE	O43918	545 aa		7.89	□□□□□ -1.15
UBE3A-223	ENST00000631247	FCGR3B	O75015	233 aa		7.89	□□□□□ -1.15
UBE3A-223	ENST00000631247	TPPP	O94811	219 aa		7.89	□□□□□ -1.15
UBE3A-223	ENST00000631247	PRH1	P02810	166 aa		7.89	□□□□□ -1.15
UBE3A-223	ENST00000631247	SAA1	P0DJI8	122 aa	Predicted RBP	7.89	□□□□□ -1.15
UBE3A-223	ENST00000631247	DTYMK	P23919	212 aa		7.89	□□□□□ -1.15
UBE3A-223	ENST00000631247	ATP5G2	Q06055	141 aa		7.89	□□□□□ -1.15
UBE3A-223	ENST00000631247	CDK10	Q15131	360 aa		7.89	□□□□□ -1.15
UBE3A-223	ENST00000631247	SSX1	Q16384	188 aa		7.89	□□□□□ -1.15
UBE3A-223	ENST00000631247	C22orf42	Q6IC83	251 aa		7.89	□□□□□ -1.15
UBE3A-223	ENST00000631247	IZUMO2	Q6UXV1	221 aa		7.89	□□□□□ -1.15
UBE3A-223	ENST00000631247	SLC25A42	Q86VD7	318 aa		7.89	□□□□□ -1.15
UBE3A-223	ENST00000631247	H1FOO	Q8IZA3	346 aa	Predicted RBP	7.89	□□□□□ -1.15
UBE3A-223	ENST00000631247	ZNF645	Q8N7E2	425 aa		7.89	□□□□□ -1.15
UBE3A-223	ENST00000631247	RNF141	Q8WVD5	230 aa		7.89	□□□□□ -1.15
UBE3A-223	ENST00000631247	DDB2	Q92466	427 aa		7.89	□□□□□ -1.15
UBE3A-223	ENST00000631247	CLUHP3	Q96NS8	147 aa		7.89	□□□□□ -1.15
UBE3A-223	ENST00000631247	ZNF430	Q9H8G1	570 aa	Predicted RBP	7.89	□□□□□ -1.15
UBE3A-223	ENST00000631247	AKIP1	Q9NQ31	210 aa		7.89	□□□□□ -1.15
UBE3A-223	ENST00000631247	NDUFB11	Q9NX14	153 aa		7.89	□□□□□ -1.15
UBE3A-223	ENST00000631247	SIGLEC8	Q9NYZ4	499 aa		7.89	□□□□□ -1.15
UBE3A-223	ENST00000631247	LCE6A	A0A183	80 aa		7.88	□□□□□ -1.15
UBE3A-223	ENST00000631247	SHISA3	A0PJX4	238 aa		7.88	□□□□□ -1.15
UBE3A-223	ENST00000631247	SMIM30	A4D0T7	59 aa		7.88	□□□□□ -1.15
UBE3A-223	ENST00000631247	LINC00473	A8K010	186 aa		7.88	□□□□□ -1.15
UBE3A-223	ENST00000631247	SLC22A5	O76082	557 aa		7.88	□□□□□ -1.15
UBE3A-223	ENST00000631247	CSN3	P07498	182 aa		7.88	□□□□□ -1.15
UBE3A-223	ENST00000631247	CTXN2	P0C2S0	81 aa		7.88	□□□□□ -1.15
UBE3A-223	ENST00000631247	CD81	P60033	236 aa		7.88	□□□□□ -1.15
UBE3A-223	ENST00000631247	HAGH	Q16775	308 aa		7.88	□□□□□ -1.15
UBE3A-223	ENST00000631247	FAM209B	Q5JX69	171 aa		7.88	□□□□□ -1.15
UBE3A-223	ENST00000631247	IL34	Q6ZMJ4	242 aa		7.88	□□□□□ -1.15
UBE3A-223	ENST00000631247		Q6ZS49	121 aa		7.88	□□□□□ -1.15
UBE3A-223	ENST00000631247	NECAP1	Q8NC96	275 aa		7.88	□□□□□ -1.15

Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms