RNA–Protein interactions for RNA: ENST00000625716.2

TCF4-249, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 359 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-249ENST00000625716 GRPEL2Q8TAA5 225 aa4.99□□□□□ -1.61
TCF4-249ENST00000625716 ARPC1AQ92747 370 aa4.99□□□□□ -1.61
TCF4-249ENST00000625716 YIPF6Q96EC8 236 aa4.99□□□□□ -1.61
TCF4-249ENST00000625716 RAX2Q96IS3 184 aa4.99□□□□□ -1.61
TCF4-249ENST00000625716 HARBI1Q96MB7 349 aa4.99□□□□□ -1.61
TCF4-249ENST00000625716 DUX3Q96PT4 197 aa4.99□□□□□ -1.61
TCF4-249ENST00000625716 P2RX4Q99571 388 aa4.99□□□□□ -1.61
TCF4-249ENST00000625716 PHB2Q99623 299 aa4.99□□□□□ -1.61
TCF4-249ENST00000625716 IFT46Q9NQC8 304 aa4.99□□□□□ -1.61
TCF4-249ENST00000625716 ANXA10Q9UJ72 324 aa4.99□□□□□ -1.61
TCF4-249ENST00000625716 FOXA2Q9Y261 457 aaPredicted RBP4.99□□□□□ -1.61
TCF4-249ENST00000625716 MRPS7Q9Y2R9 242 aaKnown RBP4.99□□□□□ -1.61
TCF4-249ENST00000625716 OR2W1Q9Y3N9 320 aa4.99□□□□□ -1.61
TCF4-249ENST00000625716 TRRAPQ9Y4A5 3859 aa4.98□□□□□ -1.61
TCF4-249ENST00000625716 MPPED1O15442 326 aa4.98□□□□□ -1.61
TCF4-249ENST00000625716 XRCC3O43542 346 aa4.98□□□□□ -1.61
TCF4-249ENST00000625716 SSX5O60225 188 aa4.98□□□□□ -1.61
TCF4-249ENST00000625716 CREBL2O60519 120 aaPredicted RBP4.98□□□□□ -1.61
TCF4-249ENST00000625716 FCGR3BO75015 233 aa4.98□□□□□ -1.61
TCF4-249ENST00000625716 ACTL6BO94805 426 aa4.98□□□□□ -1.61
TCF4-249ENST00000625716 CRYZL1O95825 349 aa4.98□□□□□ -1.61
TCF4-249ENST00000625716 HLA-DQB1P01920 261 aa4.98□□□□□ -1.61
TCF4-249ENST00000625716 OR8U8P0C7N1 319 aa4.98□□□□□ -1.61
TCF4-249ENST00000625716 DUTP33316 252 aaKnown RBP4.98□□□□□ -1.61
TCF4-249ENST00000625716 TGFBR1P36897 503 aa4.98□□□□□ -1.61
TCF4-249ENST00000625716 ZNF616Q08AN1 781 aa4.98□□□□□ -1.61
TCF4-249ENST00000625716 AKIRIN2Q53H80 203 aa4.98□□□□□ -1.61
TCF4-249ENST00000625716 TMEM177Q53S58 311 aa4.98□□□□□ -1.61
TCF4-249ENST00000625716 DEFB121Q5J5C9 76 aa4.98□□□□□ -1.61
TCF4-249ENST00000625716 TMEM69Q5SWH9 247 aa4.98□□□□□ -1.61
TCF4-249ENST00000625716 KCTD9Q7L273 389 aa4.98□□□□□ -1.61
TCF4-249ENST00000625716 HOGA1Q86XE5 327 aa4.98□□□□□ -1.61
TCF4-249ENST00000625716 TEX45Q8NA69 505 aa4.98□□□□□ -1.61
TCF4-249ENST00000625716 OR1N2Q8NGR9 330 aa4.98□□□□□ -1.61
TCF4-249ENST00000625716 OSR1Q8TAX0 266 aaPredicted RBP4.98□□□□□ -1.61
TCF4-249ENST00000625716 SLC25A38Q96DW6 304 aa4.98□□□□□ -1.61
TCF4-249ENST00000625716 TMEM68Q96MH6 324 aa4.98□□□□□ -1.61
TCF4-249ENST00000625716 MS4A10Q96PG2 267 aa4.98□□□□□ -1.61
TCF4-249ENST00000625716 OR5B12Q96R08 314 aa4.98□□□□□ -1.61
TCF4-249ENST00000625716 FAM103A1Q9BTL3 118 aaKnown RBP4.98□□□□□ -1.61
TCF4-249ENST00000625716 KLK15Q9H2R5 256 aa4.98□□□□□ -1.61
TCF4-249ENST00000625716 SLA2Q9H6Q3 261 aa4.98□□□□□ -1.61
TCF4-249ENST00000625716 AUNIPQ9H7T9 357 aa4.98□□□□□ -1.61
TCF4-249ENST00000625716 AURKAIP1Q9NWT8 199 aaPredicted RBP4.98□□□□□ -1.61
TCF4-249ENST00000625716 RBMX2Q9Y388 322 aaKnown RBP4.98□□□□□ -1.61
TCF4-249ENST00000625716 NUBP2Q9Y5Y2 271 aa4.98□□□□□ -1.61
TCF4-249ENST00000625716 C13orf42A0A1B0GVH6 325 aa4.97□□□□□ -1.61
TCF4-249ENST00000625716 SEC14L6B5MCN3 397 aa4.97□□□□□ -1.61
TCF4-249ENST00000625716 IGLV2-23P01705 113 aa4.97□□□□□ -1.61
TCF4-249ENST00000625716 TRGV3P03979 118 aa4.97□□□□□ -1.61
TCF4-249ENST00000625716 FCER2P06734 321 aa4.97□□□□□ -1.61
TCF4-249ENST00000625716 HOXD3P31249 432 aaPredicted RBP4.97□□□□□ -1.61
TCF4-249ENST00000625716 FCGR2CP31995 323 aa4.97□□□□□ -1.61
TCF4-249ENST00000625716 PRSS3P35030 304 aa4.97□□□□□ -1.61
TCF4-249ENST00000625716 RORCP51449 518 aa4.97□□□□□ -1.61
TCF4-249ENST00000625716 CRIP2P52943 208 aaPredicted RBP4.97□□□□□ -1.61
TCF4-249ENST00000625716 TPPP2P59282 170 aa4.97□□□□□ -1.61
TCF4-249ENST00000625716 UBE2KP61086 200 aa4.97□□□□□ -1.61
TCF4-249ENST00000625716 HERV-K104P61576 105 aa4.97□□□□□ -1.61
TCF4-249ENST00000625716 VBP1P61758 197 aa4.97□□□□□ -1.61
TCF4-249ENST00000625716 DGCR2P98153 550 aa4.97□□□□□ -1.61
TCF4-249ENST00000625716 RUNX1Q01196 453 aa4.97□□□□□ -1.61
TCF4-249ENST00000625716 DCTN2Q13561 401 aaKnown RBP4.97□□□□□ -1.61
TCF4-249ENST00000625716 TNXAQ16473 311 aa4.97□□□□□ -1.61
TCF4-249ENST00000625716 C9orf66Q5T8R8 295 aa4.97□□□□□ -1.61
TCF4-249ENST00000625716 MZT2AQ6P582 158 aa4.97□□□□□ -1.61
TCF4-249ENST00000625716 GVQW1Q8N7I0 195 aa4.97□□□□□ -1.61
TCF4-249ENST00000625716 OR5T1Q8NG75 326 aa4.97□□□□□ -1.61
TCF4-249ENST00000625716 OR5AP2Q8NGF4 316 aa4.97□□□□□ -1.61
TCF4-249ENST00000625716 OR4S2Q8NH73 311 aa4.97□□□□□ -1.61
TCF4-249ENST00000625716 CASTOR1Q8WTX7 329 aa4.97□□□□□ -1.61
TCF4-249ENST00000625716 SECTM1Q8WVN6 248 aa4.97□□□□□ -1.61
TCF4-249ENST00000625716 TCTEX1D2Q8WW35 142 aa4.97□□□□□ -1.61
TCF4-249ENST00000625716 ACOT12Q8WYK0 555 aa4.97□□□□□ -1.61
TCF4-249ENST00000625716 BORCS5Q969J3 196 aa4.97□□□□□ -1.61
TCF4-249ENST00000625716 SLC25A46Q96AG3 418 aa4.97□□□□□ -1.61
TCF4-249ENST00000625716 HSD17B10Q99714 261 aaKnown RBP4.97□□□□□ -1.61
TCF4-249ENST00000625716 AIFM2Q9BRQ8 373 aa4.97□□□□□ -1.61
TCF4-249ENST00000625716 FUNDC2Q9BWH2 189 aa4.97□□□□□ -1.61
TCF4-249ENST00000625716 GNB4Q9HAV0 340 aa4.97□□□□□ -1.61
TCF4-249ENST00000625716 COMMD3Q9UBI1 195 aa4.97□□□□□ -1.61
TCF4-249ENST00000625716 FBXO7Q9Y3I1 522 aa4.97□□□□□ -1.61
TCF4-249ENST00000625716 A0A0G2JLM5 398 aa4.96□□□□□ -1.62
TCF4-249ENST00000625716 MEIS3P1A6NDR6 274 aa4.96□□□□□ -1.62
TCF4-249ENST00000625716 MSGN1A6NI15 193 aa4.96□□□□□ -1.62
TCF4-249ENST00000625716 TRIM64CA6NLI5 447 aa4.96□□□□□ -1.62
TCF4-249ENST00000625716 SRRM4A7MD48 611 aaKnown RBP4.96□□□□□ -1.62
TCF4-249ENST00000625716 LINC00473A8K010 186 aa4.96□□□□□ -1.62
TCF4-249ENST00000625716 FAM25AB3EWG3 89 aa4.96□□□□□ -1.62
TCF4-249ENST00000625716 FAM25CB3EWG5 89 aa4.96□□□□□ -1.62
TCF4-249ENST00000625716 FAM25GB3EWG6 89 aa4.96□□□□□ -1.62
TCF4-249ENST00000625716 LINC01619G3V211 115 aa4.96□□□□□ -1.62
TCF4-249ENST00000625716 H3BUA1 57 aa4.96□□□□□ -1.62
TCF4-249ENST00000625716 I3L521 148 aa4.96□□□□□ -1.62
TCF4-249ENST00000625716 ARPC1BO15143 372 aaKnown RBP4.96□□□□□ -1.62
TCF4-249ENST00000625716 RAMP3O60896 148 aa4.96□□□□□ -1.62
TCF4-249ENST00000625716 HRASP01112 189 aa4.96□□□□□ -1.62
TCF4-249ENST00000625716 PPYP01298 95 aa4.96□□□□□ -1.62
TCF4-249ENST00000625716 IGHV3-11P01762 117 aa4.96□□□□□ -1.62
TCF4-249ENST00000625716 HSPB1P04792 205 aaKnown RBP4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms