RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 H1FOOQ8IZA3 346 aaPredicted RBP7.95□□□□□ -1.14
CLTCL1-208ENST00000615606 MRPL30Q8TCC3 161 aaKnown RBP7.95□□□□□ -1.14
CLTCL1-208ENST00000615606 JMJD8Q96S16 334 aa7.95□□□□□ -1.14
CLTCL1-208ENST00000615606 TNFSF18Q9UNG2 199 aa7.95□□□□□ -1.14
CLTCL1-208ENST00000615606 SERF2P84101 59 aa7.95□□□□□ -1.14
CLTCL1-208ENST00000615606 TNFRSF9Q07011 255 aa7.95□□□□□ -1.14
CLTCL1-208ENST00000615606 PRR30Q53SZ7 412 aaPredicted RBP7.95□□□□□ -1.14
CLTCL1-208ENST00000615606 DPPA3Q6W0C5 159 aa7.95□□□□□ -1.14
CLTCL1-208ENST00000615606 SLC35E3Q7Z769 313 aa7.95□□□□□ -1.14
CLTCL1-208ENST00000615606 STPG3Q8N7X2 389 aa7.95□□□□□ -1.14
CLTCL1-208ENST00000615606 NAGKQ9UJ70 344 aa7.95□□□□□ -1.14
CLTCL1-208ENST00000615606 ACAA1P09110 424 aaPredicted RBP7.94□□□□□ -1.14
CLTCL1-208ENST00000615606 ANKRD55Q3KP44 614 aa7.94□□□□□ -1.14
CLTCL1-208ENST00000615606 RBPMS2Q6ZRY4 209 aaKnown RBP7.94□□□□□ -1.14
CLTCL1-208ENST00000615606 PTBP3O95758 552 aaKnown RBP7.94□□□□□ -1.14
CLTCL1-208ENST00000615606 TMEM187Q14656 261 aa7.94□□□□□ -1.14
CLTCL1-208ENST00000615606 HIST3H3Q16695 136 aa7.94□□□□□ -1.14
CLTCL1-208ENST00000615606 LRP11Q86VZ4 500 aa7.94□□□□□ -1.14
CLTCL1-208ENST00000615606 WFDC3Q8IUB2 231 aa7.94□□□□□ -1.14
CLTCL1-208ENST00000615606 EEF1AKMT3Q96AZ1 226 aa7.94□□□□□ -1.14
CLTCL1-208ENST00000615606 LINC00052Q96N35 136 aa7.94□□□□□ -1.14
CLTCL1-208ENST00000615606 CBY1Q9Y3M2 126 aa7.94□□□□□ -1.14
CLTCL1-208ENST00000615606 HELZP42694 1942 aaKnown RBP7.94□□□□□ -1.14
CLTCL1-208ENST00000615606 FANCMQ8IYD8 2048 aa7.94□□□□□ -1.14
CLTCL1-208ENST00000615606 MED19A0JLT2 244 aaPredicted RBP7.94□□□□□ -1.14
CLTCL1-208ENST00000615606 RBFOX3A6NFN3 312 aa7.94□□□□□ -1.14
CLTCL1-208ENST00000615606 C11orf94C9JXX5 98 aa7.94□□□□□ -1.14
CLTCL1-208ENST00000615606 LYNX1G3V0Z9 82 aa7.94□□□□□ -1.14
CLTCL1-208ENST00000615606 SIGLEC5O15389 551 aa7.94□□□□□ -1.14
CLTCL1-208ENST00000615606 LYNX1P0DP58 116 aa7.94□□□□□ -1.14
CLTCL1-208ENST00000615606 RAB5AP20339 215 aa7.94□□□□□ -1.14
CLTCL1-208ENST00000615606 RND2P52198 227 aa7.94□□□□□ -1.14
CLTCL1-208ENST00000615606 IFITM3Q01628 133 aa7.94□□□□□ -1.14
CLTCL1-208ENST00000615606 NCMAPQ5T1S8 102 aa7.94□□□□□ -1.14
CLTCL1-208ENST00000615606 LAMTOR1Q6IAA8 161 aa7.94□□□□□ -1.14
CLTCL1-208ENST00000615606 SRRM5B3KS81 715 aa7.94□□□□□ -1.14
CLTCL1-208ENST00000615606 CLDN34H7C241 214 aa7.94□□□□□ -1.14
CLTCL1-208ENST00000615606 ATP6V0CP27449 155 aa7.94□□□□□ -1.14
CLTCL1-208ENST00000615606 RND3P61587 244 aa7.94□□□□□ -1.14
CLTCL1-208ENST00000615606 PAQR4Q8N4S7 273 aaPredicted RBP7.94□□□□□ -1.14
CLTCL1-208ENST00000615606 PLPPR1Q8TBJ4 325 aa7.94□□□□□ -1.14
CLTCL1-208ENST00000615606 SPSB4Q96A44 273 aa7.94□□□□□ -1.14
CLTCL1-208ENST00000615606 IL36RNQ9UBH0 155 aa7.94□□□□□ -1.14
CLTCL1-208ENST00000615606 PXMP4Q9Y6I8 212 aa7.94□□□□□ -1.14
CLTCL1-208ENST00000615606 FOXL2NBQ6ZUU3 175 aa7.93□□□□□ -1.14
CLTCL1-208ENST00000615606 GPHA2Q96T91 129 aa7.93□□□□□ -1.14
CLTCL1-208ENST00000615606 VPS25Q9BRG1 176 aa7.93□□□□□ -1.14
CLTCL1-208ENST00000615606 PAXXQ9BUH6 204 aa7.93□□□□□ -1.14
CLTCL1-208ENST00000615606 ARL2-SNX15V9GYD0 113 aa7.93□□□□□ -1.14
CLTCL1-208ENST00000615606 YPEL1O60688 119 aa7.93□□□□□ -1.14
CLTCL1-208ENST00000615606 IGKV1D-33P01593 117 aa7.93□□□□□ -1.14
CLTCL1-208ENST00000615606 IGKV1-33P01594 117 aa7.93□□□□□ -1.14
CLTCL1-208ENST00000615606 LINC00869P0C866 280 aa7.93□□□□□ -1.14
CLTCL1-208ENST00000615606 SUMO1P63165 101 aaKnown RBP7.93□□□□□ -1.14
CLTCL1-208ENST00000615606 GAMTQ14353 236 aa7.93□□□□□ -1.14
CLTCL1-208ENST00000615606 YPEL2Q96QA6 119 aa7.93□□□□□ -1.14
CLTCL1-208ENST00000615606 TMEM133Q9H2Q1 129 aa7.93□□□□□ -1.14
CLTCL1-208ENST00000615606 TMPRSS5Q9H3S3 457 aa7.93□□□□□ -1.14
CLTCL1-208ENST00000615606 VAX2Q9UIW0 290 aa7.93□□□□□ -1.14
CLTCL1-208ENST00000615606 MDC1Q14676 2089 aaKnown RBP7.93□□□□□ -1.14
CLTCL1-208ENST00000615606 MUC6Q6W4X9 2439 aa7.93□□□□□ -1.14
CLTCL1-208ENST00000615606 TRAV20A0A0B4J274 112 aa7.93□□□□□ -1.14
CLTCL1-208ENST00000615606 KIAA1324LA8MWY0 1029 aaPredicted RBP7.93□□□□□ -1.14
CLTCL1-208ENST00000615606 HSBP1O75506 76 aa7.93□□□□□ -1.14
CLTCL1-208ENST00000615606 MOSP00540 346 aa7.93□□□□□ -1.14
CLTCL1-208ENST00000615606 CCL3L1P16619 93 aa7.93□□□□□ -1.14
CLTCL1-208ENST00000615606 KRTDAPP60985 99 aa7.93□□□□□ -1.14
CLTCL1-208ENST00000615606 NHLH2Q02577 135 aa7.93□□□□□ -1.14
CLTCL1-208ENST00000615606 WDFY1Q8IWB7 410 aa7.93□□□□□ -1.14
CLTCL1-208ENST00000615606 INTS1Q8N201 2190 aaKnown RBP7.93□□□□□ -1.14
CLTCL1-208ENST00000615606 FCER1GP30273 86 aa7.93□□□□□ -1.14
CLTCL1-208ENST00000615606 HIST1H3AP68431 136 aa7.93□□□□□ -1.14
CLTCL1-208ENST00000615606 RELQ04864 619 aaPredicted RBP7.93□□□□□ -1.14
CLTCL1-208ENST00000615606 TMEM37Q8WXS4 190 aa7.93□□□□□ -1.14
CLTCL1-208ENST00000615606 MS4A10Q96PG2 267 aa7.93□□□□□ -1.14
CLTCL1-208ENST00000615606 RGS13O14921 159 aa7.92□□□□□ -1.14
CLTCL1-208ENST00000615606 FAM24BQ8N5W8 94 aa7.92□□□□□ -1.14
CLTCL1-208ENST00000615606 OR4C12Q96R67 309 aa7.92□□□□□ -1.14
CLTCL1-208ENST00000615606 LYRM2Q9NU23 88 aaPredicted RBP7.92□□□□□ -1.14
CLTCL1-208ENST00000615606 TRAPPC1Q9Y5R8 145 aa7.92□□□□□ -1.14
CLTCL1-208ENST00000615606 PDE6DO43924 150 aa7.92□□□□□ -1.14
CLTCL1-208ENST00000615606 GUCA2BQ16661 112 aa7.92□□□□□ -1.14
CLTCL1-208ENST00000615606 EBLN2Q6P2I7 272 aa7.92□□□□□ -1.14
CLTCL1-208ENST00000615606 ZNF497Q6ZNH5 498 aa7.92□□□□□ -1.14
CLTCL1-208ENST00000615606 C9orf62Q8N4C0 152 aa7.92□□□□□ -1.14
CLTCL1-208ENST00000615606 SMIM8Q96KF7 97 aa7.92□□□□□ -1.14
CLTCL1-208ENST00000615606 PROK2Q9HC23 129 aa7.92□□□□□ -1.14
CLTCL1-208ENST00000615606 M0QZK8 103 aa7.92□□□□□ -1.14
CLTCL1-208ENST00000615606 RAB9AP51151 201 aa7.92□□□□□ -1.14
CLTCL1-208ENST00000615606 TPPP2P59282 170 aa7.92□□□□□ -1.14
CLTCL1-208ENST00000615606 SLC16A13Q7RTY0 426 aa7.92□□□□□ -1.14
CLTCL1-208ENST00000615606 VKORC1L1Q8N0U8 176 aa7.92□□□□□ -1.14
CLTCL1-208ENST00000615606 FBXL15Q9H469 300 aa7.92□□□□□ -1.14
CLTCL1-208ENST00000615606 OR5AC2Q9NZP5 309 aa7.92□□□□□ -1.14
CLTCL1-208ENST00000615606 TECTAO75443 2155 aa7.92□□□□□ -1.14
CLTCL1-208ENST00000615606 RTTNQ86VV8 2226 aa7.92□□□□□ -1.14
CLTCL1-208ENST00000615606 TRBV6-7A0A0A0MS04 114 aa7.92□□□□□ -1.14
CLTCL1-208ENST00000615606 IGSF23A1L1A6 192 aa7.92□□□□□ -1.14
CLTCL1-208ENST00000615606 F5H697 171 aa7.92□□□□□ -1.14
CLTCL1-208ENST00000615606 TNFRSF14Q92956 283 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms