RNA–Protein interactions for RNA: ENST00000612155.1

SRRM3-205, Transcript of serine/arginine repetitive matrix 3, humanhuman

TSL 1 (best)

Gene SRRM3, Length 2,150 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3-205ENST00000612155 PPP1R35Q8TAP8 253 aa16.07■□□□□ 0.16
SRRM3-205ENST00000612155 PIMREGQ9BSJ6 248 aa16.07■□□□□ 0.16
SRRM3-205ENST00000612155 C19orf12Q9NSK7 152 aa16.07■□□□□ 0.16
SRRM3-205ENST00000612155 IGHV4-61A0A0C4DH41 118 aa16.06■□□□□ 0.16
SRRM3-205ENST00000612155 TNFRSF13BO14836 293 aaPredicted RBP16.06■□□□□ 0.16
SRRM3-205ENST00000612155 SULT1A1P50225 295 aa16.06■□□□□ 0.16
SRRM3-205ENST00000612155 RPL23AP62750 156 aaKnown RBP16.06■□□□□ 0.16
SRRM3-205ENST00000612155 ZNF561Q8N587 486 aa16.06■□□□□ 0.16
SRRM3-205ENST00000612155 LEAP2Q969E1 77 aa16.06■□□□□ 0.16
SRRM3-205ENST00000612155 CALYQ9NYX4 217 aa16.06■□□□□ 0.16
SRRM3-205ENST00000612155 GNG12Q9UBI6 72 aa16.06■□□□□ 0.16
SRRM3-205ENST00000612155 JPT1Q9UK76 154 aa16.06■□□□□ 0.16
SRRM3-205ENST00000612155 MYO9AB2RTY4 2548 aa16.06■□□□□ 0.16
SRRM3-205ENST00000612155 DNASE2O00115 360 aaPredicted RBP16.06■□□□□ 0.16
SRRM3-205ENST00000612155 TOR1AO14656 332 aa16.06■□□□□ 0.16
SRRM3-205ENST00000612155 YPEL1O60688 119 aa16.06■□□□□ 0.16
SRRM3-205ENST00000612155 CAMLGP49069 296 aa16.06■□□□□ 0.16
SRRM3-205ENST00000612155 ZNF66Q6ZN08 573 aa16.06■□□□□ 0.16
SRRM3-205ENST00000612155 PUSL1Q8N0Z8 303 aaKnown RBP16.06■□□□□ 0.16
SRRM3-205ENST00000612155 WFDC11Q8NEX6 87 aa16.06■□□□□ 0.16
SRRM3-205ENST00000612155 OR2G3Q8NGZ4 309 aa16.06■□□□□ 0.16
SRRM3-205ENST00000612155 YPEL2Q96QA6 119 aa16.06■□□□□ 0.16
SRRM3-205ENST00000612155 COA4Q9NYJ1 87 aa16.06■□□□□ 0.16
SRRM3-205ENST00000612155 PSENENQ9NZ42 101 aa16.06■□□□□ 0.16
SRRM3-205ENST00000612155 ITPR3Q14573 2671 aa16.05■□□□□ 0.16
SRRM3-205ENST00000612155 CYSRT1A8MQ03 144 aa16.05■□□□□ 0.16
SRRM3-205ENST00000612155 METTL15P1P0C7V9 234 aa16.05■□□□□ 0.16
SRRM3-205ENST00000612155 ZNF616Q08AN1 781 aa16.05■□□□□ 0.16
SRRM3-205ENST00000612155 CATR1Q13166 79 aa16.05■□□□□ 0.16
SRRM3-205ENST00000612155 CLDND2Q8NHS1 167 aa16.05■□□□□ 0.16
SRRM3-205ENST00000612155 Q96MF0 132 aa16.05■□□□□ 0.16
SRRM3-205ENST00000612155 ATP5SQ99766 215 aa16.05■□□□□ 0.16
SRRM3-205ENST00000612155 IFI27L2Q9H2X8 130 aa16.05■□□□□ 0.16
SRRM3-205ENST00000612155 RBKSQ9H477 322 aa16.05■□□□□ 0.16
SRRM3-205ENST00000612155 ZNF665Q9H7R5 613 aa16.05■□□□□ 0.16
SRRM3-205ENST00000612155 CARHSP1Q9Y2V2 147 aaKnown RBP16.05■□□□□ 0.16
SRRM3-205ENST00000612155 TEX15Q9BXT5 2789 aa16.05■□□□□ 0.16
SRRM3-205ENST00000612155 FAM74A7A6NL05 159 aa16.04■□□□□ 0.16
SRRM3-205ENST00000612155 BTF3P20290 206 aaKnown RBP16.04■□□□□ 0.16
SRRM3-205ENST00000612155 DUTP33316 252 aaKnown RBP16.04■□□□□ 0.16
SRRM3-205ENST00000612155 SNCAP37840 140 aa16.04■□□□□ 0.16
SRRM3-205ENST00000612155 ZNF273Q14593 569 aa16.04■□□□□ 0.16
SRRM3-205ENST00000612155 FAM74A3Q4VXF1 159 aa16.04■□□□□ 0.16
SRRM3-205ENST00000612155 RPL39P5Q59GN2 51 aa16.04■□□□□ 0.16
SRRM3-205ENST00000612155 MALRD1Q5VYJ5 2156 aa16.04■□□□□ 0.16
SRRM3-205ENST00000612155 LRRC75A-AS1Q8N1F1 130 aa16.04■□□□□ 0.16
SRRM3-205ENST00000612155 VWC2LB2RUY7 222 aa16.04■□□□□ 0.16
SRRM3-205ENST00000612155 F8W036 122 aa16.04■□□□□ 0.16
SRRM3-205ENST00000612155 DVL1O14640 695 aa16.04■□□□□ 0.16
SRRM3-205ENST00000612155 UBE2KP61086 200 aa16.04■□□□□ 0.16
SRRM3-205ENST00000612155 TNFRSF9Q07011 255 aa16.04■□□□□ 0.16
SRRM3-205ENST00000612155 HSD17B10Q99714 261 aaKnown RBP16.04■□□□□ 0.16
SRRM3-205ENST00000612155 NCOR1P1Q9H4R4 102 aa16.04■□□□□ 0.16
SRRM3-205ENST00000612155 HSPB7Q9UBY9 170 aa16.04■□□□□ 0.16
SRRM3-205ENST00000612155 YLPM1P49750 1951 aaKnown RBP16.04■□□□□ 0.16
SRRM3-205ENST00000612155 OTOGQ6ZRI0 2925 aa16.04■□□□□ 0.16
SRRM3-205ENST00000612155 PRH1P02810 166 aa16.03■□□□□ 0.16
SRRM3-205ENST00000612155 NDUFB7P17568 137 aa16.03■□□□□ 0.16
SRRM3-205ENST00000612155 GPR12P47775 334 aa16.03■□□□□ 0.16
SRRM3-205ENST00000612155 RAB5CP51148 216 aa16.03■□□□□ 0.16
SRRM3-205ENST00000612155 FAM213BQ8TBF2 198 aa16.03■□□□□ 0.16
SRRM3-205ENST00000612155 EDARADDQ8WWZ3 215 aa16.03■□□□□ 0.16
SRRM3-205ENST00000612155 NKX6-2Q9C056 277 aaPredicted RBP16.03■□□□□ 0.16
SRRM3-205ENST00000612155 OR6C3Q9NZP0 311 aa16.03■□□□□ 0.16
SRRM3-205ENST00000612155 STRAPQ9Y3F4 350 aaKnown RBP16.03■□□□□ 0.16
SRRM3-205ENST00000612155 A0A1W2PPE3 182 aa16.03■□□□□ 0.16
SRRM3-205ENST00000612155 NKX6-3A6NJ46 265 aa16.03■□□□□ 0.16
SRRM3-205ENST00000612155 RNF223E7ERA6 249 aa16.03■□□□□ 0.16
SRRM3-205ENST00000612155 TSPAN15O95858 294 aa16.03■□□□□ 0.16
SRRM3-205ENST00000612155 STX12Q86Y82 276 aa16.03■□□□□ 0.16
SRRM3-205ENST00000612155 RBMXL1Q96E39 390 aaKnown RBP16.03■□□□□ 0.16
SRRM3-205ENST00000612155 ABCA2Q9BZC7 2435 aa16.02■□□□□ 0.16
SRRM3-205ENST00000612155 A0A1B0GV50 99 aa16.02■□□□□ 0.16
SRRM3-205ENST00000612155 FAM90A26D6RGX4 464 aa16.02■□□□□ 0.16
SRRM3-205ENST00000612155 MMP23AO75900 390 aa16.02■□□□□ 0.16
SRRM3-205ENST00000612155 CCL20P78556 96 aa16.02■□□□□ 0.16
SRRM3-205ENST00000612155 CT45A1Q5HYN5 189 aa16.02■□□□□ 0.16
SRRM3-205ENST00000612155 ZNF841Q6ZN19 808 aa16.02■□□□□ 0.16
SRRM3-205ENST00000612155 CT45A3Q8NHU0 189 aa16.02■□□□□ 0.16
SRRM3-205ENST00000612155 SEC11CQ9BY50 192 aa16.02■□□□□ 0.16
SRRM3-205ENST00000612155 LPAR2Q9HBW0 351 aa16.02■□□□□ 0.16
SRRM3-205ENST00000612155 SLC25A10Q9UBX3 287 aaPredicted RBP16.02■□□□□ 0.16
SRRM3-205ENST00000612155 KBTBD11-OT1A0A1B0GTJ5 212 aa16.02■□□□□ 0.15
SRRM3-205ENST00000612155 SFTA3P0C7M3 94 aa16.02■□□□□ 0.15
SRRM3-205ENST00000612155 DVL1P1P54792 670 aaPredicted RBP16.02■□□□□ 0.15
SRRM3-205ENST00000612155 TAS2R30P59541 319 aa16.02■□□□□ 0.15
SRRM3-205ENST00000612155 TMEM155Q4W5P6 130 aa16.02■□□□□ 0.15
SRRM3-205ENST00000612155 SPANXN5Q5MJ07 72 aa16.02■□□□□ 0.15
SRRM3-205ENST00000612155 TCTEX1D1Q8N7M0 179 aa16.02■□□□□ 0.15
SRRM3-205ENST00000612155 PATZ1Q9HBE1 687 aaKnown RBP16.02■□□□□ 0.15
SRRM3-205ENST00000612155 GFOD1Q9NXC2 390 aa16.02■□□□□ 0.15
SRRM3-205ENST00000612155 CLN8Q9UBY8 286 aa16.02■□□□□ 0.15
SRRM3-205ENST00000612155 TRIM77I1YAP6 450 aa16.01■□□□□ 0.15
SRRM3-205ENST00000612155 M0R1X1 148 aa16.01■□□□□ 0.15
SRRM3-205ENST00000612155 NDUFS8O00217 210 aa16.01■□□□□ 0.15
SRRM3-205ENST00000612155 RAB29O14966 203 aa16.01■□□□□ 0.15
SRRM3-205ENST00000612155 LMO4P61968 165 aa16.01■□□□□ 0.15
SRRM3-205ENST00000612155 SPSB3Q6PJ21 355 aa16.01■□□□□ 0.15
SRRM3-205ENST00000612155 H1FXQ92522 213 aaKnown RBP16.01■□□□□ 0.15
SRRM3-205ENST00000612155 ZDHHC16Q969W1 377 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms