RNA–Protein interactions for RNA: ENST00000611736.5

VEGFA-226, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,239 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-226ENST00000611736 CCDC160A6NGH7 325 aa20.3■□□□□ 0.84
VEGFA-226ENST00000611736 SOX15O60248 233 aa20.3■□□□□ 0.84
VEGFA-226ENST00000611736 SAA1P0DJI8 122 aaPredicted RBP20.3■□□□□ 0.84
VEGFA-226ENST00000611736 SLC6A1P30531 599 aa20.3■□□□□ 0.84
VEGFA-226ENST00000611736 CDX1P47902 265 aaPredicted RBP20.3■□□□□ 0.84
VEGFA-226ENST00000611736 BRWD1-AS2P59051 145 aa20.3■□□□□ 0.84
VEGFA-226ENST00000611736 DEFB136Q30KP8 78 aa20.3■□□□□ 0.84
VEGFA-226ENST00000611736 TCTEX1D1Q8N7M0 179 aa20.3■□□□□ 0.84
VEGFA-226ENST00000611736 OR6F1Q8NGZ6 308 aa20.3■□□□□ 0.84
VEGFA-226ENST00000611736 C6orf62Q9GZU0 229 aaPredicted RBP20.3■□□□□ 0.84
VEGFA-226ENST00000611736 KLK11Q9UBX7 282 aa20.3■□□□□ 0.84
VEGFA-226ENST00000611736 GNRHRP30968 328 aa20.29■□□□□ 0.84
VEGFA-226ENST00000611736 KIR2DS2P43631 304 aa20.29■□□□□ 0.84
VEGFA-226ENST00000611736 TSPAN5P62079 268 aa20.29■□□□□ 0.84
VEGFA-226ENST00000611736 PRSS8Q16651 343 aa20.29■□□□□ 0.84
VEGFA-226ENST00000611736 MRGPRG-AS1Q2M3A8 158 aa20.29■□□□□ 0.84
VEGFA-226ENST00000611736 AKIRIN2Q53H80 203 aa20.29■□□□□ 0.84
VEGFA-226ENST00000611736 VKORC1L1Q8N0U8 176 aa20.29■□□□□ 0.84
VEGFA-226ENST00000611736 MYOZ3Q8TDC0 251 aa20.29■□□□□ 0.84
VEGFA-226ENST00000611736 FXYD6Q9H0Q3 95 aa20.29■□□□□ 0.84
VEGFA-226ENST00000611736 M0QYG6 137 aa20.28■□□□□ 0.84
VEGFA-226ENST00000611736 TPPPO94811 219 aa20.28■□□□□ 0.84
VEGFA-226ENST00000611736 RAB9AP51151 201 aa20.28■□□□□ 0.84
VEGFA-226ENST00000611736 CATR1Q13166 79 aa20.28■□□□□ 0.84
VEGFA-226ENST00000611736 OXLD1Q5BKU9 147 aa20.28■□□□□ 0.84
VEGFA-226ENST00000611736 SAMD5Q5TGI4 173 aa20.28■□□□□ 0.84
VEGFA-226ENST00000611736 MRPL41Q8IXM3 137 aaKnown RBP20.28■□□□□ 0.84
VEGFA-226ENST00000611736 LINC00482Q8N8I6 264 aa20.28■□□□□ 0.84
VEGFA-226ENST00000611736 WFDC9Q8NEX5 89 aa20.28■□□□□ 0.84
VEGFA-226ENST00000611736 OR51H1Q8NH63 302 aa20.28■□□□□ 0.84
VEGFA-226ENST00000611736 C15orf40Q8WUR7 153 aa20.28■□□□□ 0.84
VEGFA-226ENST00000611736 RAX2Q96IS3 184 aa20.28■□□□□ 0.84
VEGFA-226ENST00000611736 SLIRPQ9GZT3 109 aaKnown RBP20.28■□□□□ 0.84
VEGFA-226ENST00000611736 RAMP3O60896 148 aa20.27■□□□□ 0.84
VEGFA-226ENST00000611736 MYCNOSP40205 109 aa20.27■□□□□ 0.84
VEGFA-226ENST00000611736 KIAA0141Q14154 515 aaPredicted RBP20.27■□□□□ 0.84
VEGFA-226ENST00000611736 TNXAQ16473 311 aa20.27■□□□□ 0.84
VEGFA-226ENST00000611736 AADACL3Q5VUY0 350 aa20.27■□□□□ 0.84
VEGFA-226ENST00000611736 SPAG16Q8N0X2 631 aa20.27■□□□□ 0.84
VEGFA-226ENST00000611736 ZNF491Q8N8L2 437 aa20.27■□□□□ 0.84
VEGFA-226ENST00000611736 C4orf3Q8WVX3 66 aa20.27■□□□□ 0.84
VEGFA-226ENST00000611736 BORCS5Q969J3 196 aa20.27■□□□□ 0.84
VEGFA-226ENST00000611736 DIRAS2Q96HU8 199 aa20.27■□□□□ 0.84
VEGFA-226ENST00000611736 ZNF430Q9H8G1 570 aaPredicted RBP20.27■□□□□ 0.84
VEGFA-226ENST00000611736 GNB4Q9HAV0 340 aa20.27■□□□□ 0.84
VEGFA-226ENST00000611736 MTFP1Q9UDX5 166 aa20.27■□□□□ 0.84
VEGFA-226ENST00000611736 CCL24O00175 119 aa20.26■□□□□ 0.83
VEGFA-226ENST00000611736 IGLL1P15814 213 aa20.26■□□□□ 0.83
VEGFA-226ENST00000611736 DGCR2P98153 550 aa20.26■□□□□ 0.83
VEGFA-226ENST00000611736 OR5M8Q8NGP6 311 aa20.26■□□□□ 0.83
VEGFA-226ENST00000611736 FCAMRQ8WWV6 532 aa20.26■□□□□ 0.83
VEGFA-226ENST00000611736 OR5B12Q96R08 314 aa20.26■□□□□ 0.83
VEGFA-226ENST00000611736 VSIG4Q9Y279 399 aa20.26■□□□□ 0.83
VEGFA-226ENST00000611736 DNAH3Q8TD57 4116 aa20.26■□□□□ 0.83
VEGFA-226ENST00000611736 RAB25P57735 213 aa20.25■□□□□ 0.83
VEGFA-226ENST00000611736 SSX9Q7RTT3 188 aa20.25■□□□□ 0.83
VEGFA-226ENST00000611736 OR5T1Q8NG75 326 aa20.25■□□□□ 0.83
VEGFA-226ENST00000611736 UBE2E2Q96LR5 201 aa20.25■□□□□ 0.83
VEGFA-226ENST00000611736 MS4A10Q96PG2 267 aa20.25■□□□□ 0.83
VEGFA-226ENST00000611736 P2RX4Q99571 388 aa20.25■□□□□ 0.83
VEGFA-226ENST00000611736 PHB2Q99623 299 aa20.25■□□□□ 0.83
VEGFA-226ENST00000611736 CREBL2O60519 120 aaPredicted RBP20.24■□□□□ 0.83
VEGFA-226ENST00000611736 HRASP01112 189 aa20.24■□□□□ 0.83
VEGFA-226ENST00000611736 RLN1P04808 185 aa20.24■□□□□ 0.83
VEGFA-226ENST00000611736 APELAP0DMC3 54 aa20.24■□□□□ 0.83
VEGFA-226ENST00000611736 VAX1Q5SQQ9 334 aa20.24■□□□□ 0.83
VEGFA-226ENST00000611736 PYHIN1Q6K0P9 492 aa20.24■□□□□ 0.83
VEGFA-226ENST00000611736 MMD2Q8IY49 270 aa20.24■□□□□ 0.83
VEGFA-226ENST00000611736 MCFD2Q8NI22 146 aa20.24■□□□□ 0.83
VEGFA-226ENST00000611736 RHOVQ96L33 236 aa20.24■□□□□ 0.83
VEGFA-226ENST00000611736 TINAGL1Q9GZM7 467 aaPredicted RBP20.24■□□□□ 0.83
VEGFA-226ENST00000611736 GABARAPH6UMI1 98 aa20.23■□□□□ 0.83
VEGFA-226ENST00000611736 GPR31O00270 319 aa20.23■□□□□ 0.83
VEGFA-226ENST00000611736 PGLYRP1O75594 196 aaPredicted RBP20.23■□□□□ 0.83
VEGFA-226ENST00000611736 ACTL6BO94805 426 aa20.23■□□□□ 0.83
VEGFA-226ENST00000611736 OR2A4O95047 310 aa20.23■□□□□ 0.83
VEGFA-226ENST00000611736 CD3DP04234 171 aa20.23■□□□□ 0.83
VEGFA-226ENST00000611736 IFNA6P05013 189 aa20.23■□□□□ 0.83
VEGFA-226ENST00000611736 CD40LGP29965 261 aa20.23■□□□□ 0.83
VEGFA-226ENST00000611736 IL18Q14116 193 aa20.23■□□□□ 0.83
VEGFA-226ENST00000611736 BEAN1Q3B7T3 259 aa20.23■□□□□ 0.83
VEGFA-226ENST00000611736 RNASE10Q5GAN6 216 aaKnown RBP20.23■□□□□ 0.83
VEGFA-226ENST00000611736 CMTM1Q8IZ96 169 aa20.23■□□□□ 0.83
VEGFA-226ENST00000611736 POC5Q8NA72 575 aa20.23■□□□□ 0.83
VEGFA-226ENST00000611736 SRSF12Q8WXF0 261 aaKnown RBP20.23■□□□□ 0.83
VEGFA-226ENST00000611736 OR2A7Q96R45 310 aa20.23■□□□□ 0.83
VEGFA-226ENST00000611736 RBM38Q9H0Z9 239 aaKnown RBP20.23■□□□□ 0.83
VEGFA-226ENST00000611736 ZNF355PQ9NSJ1 428 aa20.23■□□□□ 0.83
VEGFA-226ENST00000611736 MSGN1A6NI15 193 aa20.22■□□□□ 0.83
VEGFA-226ENST00000611736 RBFOX2O43251 390 aaKnown RBP eCLIP20.22■□□□□ 0.835e-9■□□□□ 10.6
VEGFA-226ENST00000611736 KBTBD11O94819 623 aa20.22■□□□□ 0.83
VEGFA-226ENST00000611736 TPPP2P59282 170 aa20.22■□□□□ 0.83
VEGFA-226ENST00000611736 PHLDA2Q53GA4 152 aa20.22■□□□□ 0.83
VEGFA-226ENST00000611736 C10orf55Q5SWW7 151 aa20.22■□□□□ 0.83
VEGFA-226ENST00000611736 ASPHD1Q5U4P2 390 aa20.22■□□□□ 0.83
VEGFA-226ENST00000611736 PUSL1Q8N0Z8 303 aaKnown RBP20.22■□□□□ 0.83
VEGFA-226ENST00000611736 VSTM2AQ8TAG5 236 aa20.22■□□□□ 0.83
VEGFA-226ENST00000611736 RSL24D1Q9UHA3 163 aaKnown RBP20.22■□□□□ 0.83
VEGFA-226ENST00000611736 PRKDCP78527 4128 aaKnown RBP20.22■□□□□ 0.83
VEGFA-226ENST00000611736 TRGV3P03979 118 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms