RNA–Protein interactions for RNA: ENST00000606066.1

CTSA-211, Transcript of cathepsin A, humanhuman

TSL 5

Gene CTSA, Length 603 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-211ENST00000606066 TRIM63Q969Q1 353 aa11.27□□□□□ -0.61
CTSA-211ENST00000606066 SCGB3A2Q96PL1 93 aa11.27□□□□□ -0.61
CTSA-211ENST00000606066 CITED1Q99966 193 aa11.27□□□□□ -0.61
CTSA-211ENST00000606066 HSPB9Q9BQS6 159 aa11.27□□□□□ -0.61
CTSA-211ENST00000606066 OR51J1Q9H342 316 aa11.27□□□□□ -0.61
CTSA-211ENST00000606066 SLC2A8Q9NY64 477 aa11.27□□□□□ -0.61
CTSA-211ENST00000606066 CMYA5Q8N3K9 4069 aa11.26□□□□□ -0.61
CTSA-211ENST00000606066 IGHV7-81A0A0B4J1V7 117 aa11.26□□□□□ -0.61
CTSA-211ENST00000606066 PSMB11A5LHX3 300 aa11.26□□□□□ -0.61
CTSA-211ENST00000606066 SRRM4A7MD48 611 aaKnown RBP11.26□□□□□ -0.61
CTSA-211ENST00000606066 IGLV2-23P01705 113 aa11.26□□□□□ -0.61
CTSA-211ENST00000606066 IGF1P05019 195 aa11.26□□□□□ -0.61
CTSA-211ENST00000606066 VDAC1P21796 283 aa11.26□□□□□ -0.61
CTSA-211ENST00000606066 F2RP25116 425 aa11.26□□□□□ -0.61
CTSA-211ENST00000606066 PPP5CP53041 499 aa11.26□□□□□ -0.61
CTSA-211ENST00000606066 KLF9Q13886 244 aaPredicted RBP11.26□□□□□ -0.61
CTSA-211ENST00000606066 ZNF57Q68EA5 555 aaPredicted RBP11.26□□□□□ -0.61
CTSA-211ENST00000606066 IDO2Q6ZQW0 420 aa11.26□□□□□ -0.61
CTSA-211ENST00000606066 STPG2Q8N412 459 aa11.26□□□□□ -0.61
CTSA-211ENST00000606066 CCDC71LQ8N9Z2 235 aa11.26□□□□□ -0.61
CTSA-211ENST00000606066 OR5AU1Q8NGC0 362 aa11.26□□□□□ -0.61
CTSA-211ENST00000606066 OR51S1Q8NGJ8 323 aa11.26□□□□□ -0.61
CTSA-211ENST00000606066 S100ZQ8WXG8 99 aa11.26□□□□□ -0.61
CTSA-211ENST00000606066 CLCC1Q96S66 551 aa11.26□□□□□ -0.61
CTSA-211ENST00000606066 SLC2A9Q9NRM0 540 aa11.26□□□□□ -0.61
CTSA-211ENST00000606066 ZNF580Q9UK33 172 aa11.26□□□□□ -0.61
CTSA-211ENST00000606066 VWFP04275 2813 aa11.26□□□□□ -0.61
CTSA-211ENST00000606066 LINC01548A6NM66 108 aa11.25□□□□□ -0.61
CTSA-211ENST00000606066 FCN1O00602 326 aa11.25□□□□□ -0.61
CTSA-211ENST00000606066 RAMP3O60896 148 aa11.25□□□□□ -0.61
CTSA-211ENST00000606066 FBXO24O75426 580 aa11.25□□□□□ -0.61
CTSA-211ENST00000606066 CA2P00918 260 aa11.25□□□□□ -0.61
CTSA-211ENST00000606066 CRYGBP07316 175 aa11.25□□□□□ -0.61
CTSA-211ENST00000606066 PIGPP57054 158 aa11.25□□□□□ -0.61
CTSA-211ENST00000606066 BRWD1-AS2P59051 145 aa11.25□□□□□ -0.61
CTSA-211ENST00000606066 TAS2R31P59538 309 aa11.25□□□□□ -0.61
CTSA-211ENST00000606066 KRTAP10-3P60369 221 aa11.25□□□□□ -0.61
CTSA-211ENST00000606066 RND3P61587 244 aa11.25□□□□□ -0.61
CTSA-211ENST00000606066 CX3CL1P78423 397 aa11.25□□□□□ -0.61
CTSA-211ENST00000606066 TBC1D26Q86UD7 250 aa11.25□□□□□ -0.61
CTSA-211ENST00000606066 COMMD1Q8N668 190 aa11.25□□□□□ -0.61
CTSA-211ENST00000606066 OR4X2Q8NGF9 303 aa11.25□□□□□ -0.61
CTSA-211ENST00000606066 MARCH1Q8TCQ1 289 aa11.25□□□□□ -0.61
CTSA-211ENST00000606066 NOL4LQ96MY1 436 aaPredicted RBP11.25□□□□□ -0.61
CTSA-211ENST00000606066 PLEKHA2Q9HB19 425 aa11.25□□□□□ -0.61
CTSA-211ENST00000606066 HRASLSQ9HDD0 168 aa11.25□□□□□ -0.61
CTSA-211ENST00000606066 PARP11Q9NR21 331 aa11.25□□□□□ -0.61
CTSA-211ENST00000606066 FAM212BQ9NTI7 297 aaPredicted RBP11.25□□□□□ -0.61
CTSA-211ENST00000606066 COPZ2Q9P299 210 aa11.25□□□□□ -0.61
CTSA-211ENST00000606066 C14orf166Q9Y224 244 aaKnown RBP11.25□□□□□ -0.61
CTSA-211ENST00000606066 PRKDCP78527 4128 aaKnown RBP11.24□□□□□ -0.61
CTSA-211ENST00000606066 MPPED1O15442 326 aa11.24□□□□□ -0.61
CTSA-211ENST00000606066 ACTL6BO94805 426 aa11.24□□□□□ -0.61
CTSA-211ENST00000606066 OR2A4O95047 310 aa11.24□□□□□ -0.61
CTSA-211ENST00000606066 CNIH1O95406 144 aa11.24□□□□□ -0.61
CTSA-211ENST00000606066 CTSDP07339 412 aaPredicted RBP11.24□□□□□ -0.61
CTSA-211ENST00000606066 SAA1P0DJI8 122 aaPredicted RBP11.24□□□□□ -0.61
CTSA-211ENST00000606066 NQO2P16083 231 aa11.24□□□□□ -0.61
CTSA-211ENST00000606066 SRSF4Q08170 494 aaKnown RBP11.24□□□□□ -0.61
CTSA-211ENST00000606066 TMEM267Q0VDI3 215 aaPredicted RBP11.24□□□□□ -0.61
CTSA-211ENST00000606066 BAK1Q16611 211 aa11.24□□□□□ -0.61
CTSA-211ENST00000606066 OR13C8Q8NGS7 320 aa11.24□□□□□ -0.61
CTSA-211ENST00000606066 WIPF2Q8TF74 440 aaPredicted RBP11.24□□□□□ -0.61
CTSA-211ENST00000606066 ABHD5Q8WTS1 349 aa11.24□□□□□ -0.61
CTSA-211ENST00000606066 RHOVQ96L33 236 aa11.24□□□□□ -0.61
CTSA-211ENST00000606066 OR2A7Q96R45 310 aa11.24□□□□□ -0.61
CTSA-211ENST00000606066 COMMD9Q9P000 198 aa11.24□□□□□ -0.61
CTSA-211ENST00000606066 LINC00527Q9UJ94 153 aa11.24□□□□□ -0.61
CTSA-211ENST00000606066 NOTCH1P46531 2555 aa11.23□□□□□ -0.61
CTSA-211ENST00000606066 CENPXA8MT69 81 aa11.23□□□□□ -0.61
CTSA-211ENST00000606066 ATP6V0E1O15342 81 aa11.23□□□□□ -0.61
CTSA-211ENST00000606066 B3GALNT1O75752 331 aa11.23□□□□□ -0.61
CTSA-211ENST00000606066 PI3P19957 117 aa11.23□□□□□ -0.61
CTSA-211ENST00000606066 ERVK-16P61578 105 aa11.23□□□□□ -0.61
CTSA-211ENST00000606066 GNB1P62873 340 aa11.23□□□□□ -0.61
CTSA-211ENST00000606066 DEFA6Q01524 100 aa11.23□□□□□ -0.61
CTSA-211ENST00000606066 FXYD3Q14802 87 aa11.23□□□□□ -0.61
CTSA-211ENST00000606066 PRSS8Q16651 343 aa11.23□□□□□ -0.61
CTSA-211ENST00000606066 TEX38Q6PEX7 206 aa11.23□□□□□ -0.61
CTSA-211ENST00000606066 TREML4Q6UXN2 200 aa11.23□□□□□ -0.61
CTSA-211ENST00000606066 ZNF329Q86UD4 541 aa11.23□□□□□ -0.61
CTSA-211ENST00000606066 MMD2Q8IY49 270 aa11.23□□□□□ -0.61
CTSA-211ENST00000606066 C11orf44Q8N8P7 122 aa11.23□□□□□ -0.61
CTSA-211ENST00000606066 OR4A5Q8NH83 315 aa11.23□□□□□ -0.61
CTSA-211ENST00000606066 ARPC1AQ92747 370 aa11.23□□□□□ -0.61
CTSA-211ENST00000606066 AKIP1Q9NQ31 210 aa11.23□□□□□ -0.61
CTSA-211ENST00000606066 TPSG1Q9NRR2 321 aa11.23□□□□□ -0.61
CTSA-211ENST00000606066 TRAV41A0A0B4J266 112 aa11.22□□□□□ -0.61
CTSA-211ENST00000606066 NAP1L6A6NFF2 107 aa11.22□□□□□ -0.61
CTSA-211ENST00000606066 OPN1MWP04001 364 aa11.22□□□□□ -0.61
CTSA-211ENST00000606066 SERPINE2P07093 398 aa11.22□□□□□ -0.61
CTSA-211ENST00000606066 OPN1MW2P0DN77 364 aa11.22□□□□□ -0.61
CTSA-211ENST00000606066 OPN1MW3P0DN78 364 aa11.22□□□□□ -0.61
CTSA-211ENST00000606066 CD28P10747 220 aa11.22□□□□□ -0.61
CTSA-211ENST00000606066 IL7P13232 177 aa11.22□□□□□ -0.61
CTSA-211ENST00000606066 LPAR6P43657 344 aa11.22□□□□□ -0.61
CTSA-211ENST00000606066 POU2AF1Q16633 256 aa11.22□□□□□ -0.61
CTSA-211ENST00000606066 VKORC1L1Q8N0U8 176 aa11.22□□□□□ -0.61
CTSA-211ENST00000606066 PUSL1Q8N0Z8 303 aaKnown RBP11.22□□□□□ -0.61
CTSA-211ENST00000606066 DMBX1Q8NFW5 382 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms