RNA–Protein interactions for RNA: ENST00000604306.1

NEDD8-MDP1-203, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 681 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-203ENST00000604306 MSGN1A6NI15 193 aa9.98□□□□□ -0.81
NEDD8-MDP1-203ENST00000604306 SSSCA1O60232 199 aa9.98□□□□□ -0.81
NEDD8-MDP1-203ENST00000604306 JTBO76095 146 aa9.98□□□□□ -0.81
NEDD8-MDP1-203ENST00000604306 CRYZL1O95825 349 aa9.98□□□□□ -0.81
NEDD8-MDP1-203ENST00000604306 TPT1P13693 172 aaKnown RBP9.98□□□□□ -0.81
NEDD8-MDP1-203ENST00000604306 LGALS7P47929 136 aa9.98□□□□□ -0.81
NEDD8-MDP1-203ENST00000604306 SPCS3P61009 180 aa9.98□□□□□ -0.81
NEDD8-MDP1-203ENST00000604306 UBE2KP61086 200 aa9.98□□□□□ -0.81
NEDD8-MDP1-203ENST00000604306 HABP2Q14520 560 aaPredicted RBP9.98□□□□□ -0.81
NEDD8-MDP1-203ENST00000604306 SCARB1Q8WTV0 552 aa9.98□□□□□ -0.81
NEDD8-MDP1-203ENST00000604306 ST8SIA2Q92186 375 aa9.98□□□□□ -0.81
NEDD8-MDP1-203ENST00000604306 MBD6Q96DN6 1003 aa9.98□□□□□ -0.81
NEDD8-MDP1-203ENST00000604306 C1orf159Q96HA4 380 aa9.98□□□□□ -0.81
NEDD8-MDP1-203ENST00000604306 TMEM140Q9NV12 185 aa9.98□□□□□ -0.81
NEDD8-MDP1-203ENST00000604306 FKBP11Q9NYL4 201 aa9.98□□□□□ -0.81
NEDD8-MDP1-203ENST00000604306 PRNDQ9UKY0 176 aa9.98□□□□□ -0.81
NEDD8-MDP1-203ENST00000604306 FOXA2Q9Y261 457 aaPredicted RBP9.98□□□□□ -0.81
NEDD8-MDP1-203ENST00000604306 TBL2Q9Y4P3 447 aaKnown RBP9.98□□□□□ -0.81
NEDD8-MDP1-203ENST00000604306 AKAP6Q13023 2319 aa9.98□□□□□ -0.81
NEDD8-MDP1-203ENST00000604306 DCHS2Q6V1P9 2916 aa9.97□□□□□ -0.81
NEDD8-MDP1-203ENST00000604306 C15orf61A6NNL5 157 aa9.97□□□□□ -0.81
NEDD8-MDP1-203ENST00000604306 LEUTXA8MZ59 168 aa9.97□□□□□ -0.81
NEDD8-MDP1-203ENST00000604306 CHST1O43916 411 aa9.97□□□□□ -0.81
NEDD8-MDP1-203ENST00000604306 ZFP36P26651 326 aaKnown RBP9.97□□□□□ -0.81
NEDD8-MDP1-203ENST00000604306 HTR1DP28221 377 aa9.97□□□□□ -0.81
NEDD8-MDP1-203ENST00000604306 ATP5IP56385 69 aaPredicted RBP9.97□□□□□ -0.81
NEDD8-MDP1-203ENST00000604306 RELBQ01201 579 aa9.97□□□□□ -0.81
NEDD8-MDP1-203ENST00000604306 EWSR1Q01844 656 aaKnown RBP eCLIP9.97□□□□□ -0.81
NEDD8-MDP1-203ENST00000604306 EXOSC2Q13868 293 aaKnown RBP9.97□□□□□ -0.81
NEDD8-MDP1-203ENST00000604306 ZNF787Q6DD87 383 aa9.97□□□□□ -0.81
NEDD8-MDP1-203ENST00000604306 EIF5AL1Q6IS14 154 aaKnown RBP9.97□□□□□ -0.81
NEDD8-MDP1-203ENST00000604306 CCDC144NLQ6NUI1 221 aa9.97□□□□□ -0.81
NEDD8-MDP1-203ENST00000604306 STX12Q86Y82 276 aa9.97□□□□□ -0.81
NEDD8-MDP1-203ENST00000604306 TMEM252Q8N6L7 170 aa9.97□□□□□ -0.81
NEDD8-MDP1-203ENST00000604306 UBAC2Q8NBM4 344 aa9.97□□□□□ -0.81
NEDD8-MDP1-203ENST00000604306 OR4A16Q8NH70 328 aa9.97□□□□□ -0.81
NEDD8-MDP1-203ENST00000604306 LRRC20Q8TCA0 184 aa9.97□□□□□ -0.81
NEDD8-MDP1-203ENST00000604306 LHX4Q969G2 390 aa9.97□□□□□ -0.81
NEDD8-MDP1-203ENST00000604306 FLYWCH2Q96CP2 140 aaKnown RBP9.97□□□□□ -0.81
NEDD8-MDP1-203ENST00000604306 ZC4H2Q9NQZ6 224 aa9.97□□□□□ -0.81
NEDD8-MDP1-203ENST00000604306 TMEM14BQ9NUH8 114 aa9.97□□□□□ -0.81
NEDD8-MDP1-203ENST00000604306 CHD6Q8TD26 2715 aa9.97□□□□□ -0.81
NEDD8-MDP1-203ENST00000604306 COL12A1Q99715 3063 aa9.96□□□□□ -0.81
NEDD8-MDP1-203ENST00000604306 ABCA2Q9BZC7 2435 aa9.96□□□□□ -0.81
NEDD8-MDP1-203ENST00000604306 BORCS7-ASMTA0A0B4J1R7 106 aa9.96□□□□□ -0.82
NEDD8-MDP1-203ENST00000604306 A1L4Q6 167 aa9.96□□□□□ -0.82
NEDD8-MDP1-203ENST00000604306 SPDEFO95238 335 aa9.96□□□□□ -0.82
NEDD8-MDP1-203ENST00000604306 USF1P22415 310 aaPredicted RBP9.96□□□□□ -0.82
NEDD8-MDP1-203ENST00000604306 GATA3P23771 443 aa9.96□□□□□ -0.82
NEDD8-MDP1-203ENST00000604306 SULT1A1P50225 295 aa9.96□□□□□ -0.82
NEDD8-MDP1-203ENST00000604306 DVL1P1P54792 670 aaPredicted RBP9.96□□□□□ -0.82
NEDD8-MDP1-203ENST00000604306 PAX9P55771 341 aa9.96□□□□□ -0.82
NEDD8-MDP1-203ENST00000604306 ARF6P62330 175 aa9.96□□□□□ -0.82
NEDD8-MDP1-203ENST00000604306 RPP30P78346 268 aaKnown RBP9.96□□□□□ -0.82
NEDD8-MDP1-203ENST00000604306 ZNF266Q14584 549 aa9.96□□□□□ -0.82
NEDD8-MDP1-203ENST00000604306 OR4A47Q6IF82 309 aa9.96□□□□□ -0.82
NEDD8-MDP1-203ENST00000604306 HCP5Q6MZN7 132 aa9.96□□□□□ -0.82
NEDD8-MDP1-203ENST00000604306 BAP18Q8IXM2 172 aa9.96□□□□□ -0.82
NEDD8-MDP1-203ENST00000604306 PNKDQ8N490 385 aa9.96□□□□□ -0.82
NEDD8-MDP1-203ENST00000604306 OR5B3Q8NH48 314 aa9.96□□□□□ -0.82
NEDD8-MDP1-203ENST00000604306 RPEQ96AT9 228 aa9.96□□□□□ -0.82
NEDD8-MDP1-203ENST00000604306 ZNF471Q9BX82 626 aaPredicted RBP9.96□□□□□ -0.82
NEDD8-MDP1-203ENST00000604306 ARV1Q9H2C2 271 aa9.96□□□□□ -0.82
NEDD8-MDP1-203ENST00000604306 NARFLQ9H6Q4 476 aa9.96□□□□□ -0.82
NEDD8-MDP1-203ENST00000604306 LPAR2Q9HBW0 351 aa9.96□□□□□ -0.82
NEDD8-MDP1-203ENST00000604306 CYTL1Q9NRR1 136 aa9.96□□□□□ -0.82
NEDD8-MDP1-203ENST00000604306 DPM3Q9P2X0 92 aa9.96□□□□□ -0.82
NEDD8-MDP1-203ENST00000604306 WNK2Q9Y3S1 2297 aa9.95□□□□□ -0.82
NEDD8-MDP1-203ENST00000604306 IGHV1-3A0A0C4DH29 117 aa9.95□□□□□ -0.82
NEDD8-MDP1-203ENST00000604306 INS-IGF2F8WCM5 200 aa9.95□□□□□ -0.82
NEDD8-MDP1-203ENST00000604306 UPK2O00526 184 aa9.95□□□□□ -0.82
NEDD8-MDP1-203ENST00000604306 SHOXO15266 292 aa9.95□□□□□ -0.82
NEDD8-MDP1-203ENST00000604306 DFFBO76075 338 aa9.95□□□□□ -0.82
NEDD8-MDP1-203ENST00000604306 KBTBD11O94819 623 aa9.95□□□□□ -0.82
NEDD8-MDP1-203ENST00000604306 TMEM50AO95807 157 aa9.95□□□□□ -0.82
NEDD8-MDP1-203ENST00000604306 IGKV1-16P04430 117 aa9.95□□□□□ -0.82
NEDD8-MDP1-203ENST00000604306 OR9G9P0C7N8 305 aa9.95□□□□□ -0.82
NEDD8-MDP1-203ENST00000604306 CD1BP29016 333 aa9.95□□□□□ -0.82
NEDD8-MDP1-203ENST00000604306 CAV2P51636 162 aa9.95□□□□□ -0.82
NEDD8-MDP1-203ENST00000604306 UBE2E1P51965 193 aa9.95□□□□□ -0.82
NEDD8-MDP1-203ENST00000604306 LINC00205P59089 165 aa9.95□□□□□ -0.82
NEDD8-MDP1-203ENST00000604306 HBG1P69891 147 aa9.95□□□□□ -0.82
NEDD8-MDP1-203ENST00000604306 HBG2P69892 147 aa9.95□□□□□ -0.82
NEDD8-MDP1-203ENST00000604306 CLLU1Q5K131 121 aa9.95□□□□□ -0.82
NEDD8-MDP1-203ENST00000604306 TPTE2P1Q5T6R2 138 aa9.95□□□□□ -0.82
NEDD8-MDP1-203ENST00000604306 PRSS57Q6UWY2 283 aa9.95□□□□□ -0.82
NEDD8-MDP1-203ENST00000604306 VMO1Q7Z5L0 202 aa9.95□□□□□ -0.82
NEDD8-MDP1-203ENST00000604306 TMEM167AQ8TBQ9 72 aa9.95□□□□□ -0.82
NEDD8-MDP1-203ENST00000604306 DTD1Q8TEA8 209 aa9.95□□□□□ -0.82
NEDD8-MDP1-203ENST00000604306 HARBI1Q96MB7 349 aa9.95□□□□□ -0.82
NEDD8-MDP1-203ENST00000604306 PSMG3-AS1Q96PY0 264 aa9.95□□□□□ -0.82
NEDD8-MDP1-203ENST00000604306 CLCC1Q96S66 551 aa9.95□□□□□ -0.82
NEDD8-MDP1-203ENST00000604306 PARD6GQ9BYG4 376 aaPredicted RBP9.95□□□□□ -0.82
NEDD8-MDP1-203ENST00000604306 MAGT1Q9H0U3 335 aa9.95□□□□□ -0.82
NEDD8-MDP1-203ENST00000604306 RBKSQ9H477 322 aa9.95□□□□□ -0.82
NEDD8-MDP1-203ENST00000604306 FBXL17Q9UF56 701 aa9.95□□□□□ -0.82
NEDD8-MDP1-203ENST00000604306 INSIG2Q9Y5U4 225 aa9.95□□□□□ -0.82
NEDD8-MDP1-203ENST00000604306 A0A1W2PPI3 338 aa9.94□□□□□ -0.82
NEDD8-MDP1-203ENST00000604306 IGSF23A1L1A6 192 aa9.94□□□□□ -0.82
NEDD8-MDP1-203ENST00000604306 H7C2Y5 167 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms